RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130	IGHV2-70D	A0A0C4DH43	119 aa		11.23	□□□□□ -0.61
UBE2F-223	ENST00000612130	CA1	P00915	261 aa	Predicted RBP	11.23	□□□□□ -0.61
UBE2F-223	ENST00000612130	CGB3	P0DN86	165 aa		11.23	□□□□□ -0.61
UBE2F-223	ENST00000612130	CGB7	P0DN87	165 aa		11.23	□□□□□ -0.61
UBE2F-223	ENST00000612130	CD46	P15529	392 aa		11.23	□□□□□ -0.61
UBE2F-223	ENST00000612130	TNFSF4	P23510	183 aa		11.23	□□□□□ -0.61
UBE2F-223	ENST00000612130	MFAP2	P55001	183 aa		11.23	□□□□□ -0.61
UBE2F-223	ENST00000612130	UBE2L3	P68036	154 aa	Known RBP	11.23	□□□□□ -0.61
UBE2F-223	ENST00000612130	MAJIN	Q3KP22	176 aa		11.23	□□□□□ -0.61
UBE2F-223	ENST00000612130	SAPCD1	Q5SSQ6	148 aa		11.23	□□□□□ -0.61
UBE2F-223	ENST00000612130	FAM162B	Q5T6X4	162 aa		11.23	□□□□□ -0.61
UBE2F-223	ENST00000612130	EBLN2	Q6P2I7	272 aa		11.23	□□□□□ -0.61
UBE2F-223	ENST00000612130	ATP5L2	Q7Z4Y8	100 aa		11.23	□□□□□ -0.61
UBE2F-223	ENST00000612130	TRIB1	Q96RU8	372 aa		11.23	□□□□□ -0.61
UBE2F-223	ENST00000612130	TNFRSF19	Q9NS68	423 aa		11.23	□□□□□ -0.61
UBE2F-223	ENST00000612130	DOCK7	Q96N67	2140 aa		11.22	□□□□□ -0.61
UBE2F-223	ENST00000612130	IGHV3-13	P01766	116 aa		11.22	□□□□□ -0.61
UBE2F-223	ENST00000612130	IGHV3-7	P01780	117 aa		11.22	□□□□□ -0.61
UBE2F-223	ENST00000612130	CFHR2	P36980	270 aa		11.22	□□□□□ -0.61
UBE2F-223	ENST00000612130	CDKN1B	P46527	198 aa		11.22	□□□□□ -0.61
UBE2F-223	ENST00000612130	CT45A1	Q5HYN5	189 aa		11.22	□□□□□ -0.61
UBE2F-223	ENST00000612130	TMEM105	Q8N8V8	129 aa		11.22	□□□□□ -0.61
UBE2F-223	ENST00000612130	OR1L8	Q8NGR8	309 aa		11.22	□□□□□ -0.61
UBE2F-223	ENST00000612130	CT45A3	Q8NHU0	189 aa		11.22	□□□□□ -0.61
UBE2F-223	ENST00000612130	FAM122A	Q96E09	287 aa		11.22	□□□□□ -0.61
UBE2F-223	ENST00000612130	ZNF714	Q96N38	554 aa		11.22	□□□□□ -0.61
UBE2F-223	ENST00000612130	ALKBH7	Q9BT30	221 aa	Predicted RBP	11.22	□□□□□ -0.61
UBE2F-223	ENST00000612130	C1RL	Q9NZP8	487 aa		11.22	□□□□□ -0.61
UBE2F-223	ENST00000612130	CLCF1	Q9UBD9	225 aa		11.22	□□□□□ -0.61
UBE2F-223	ENST00000612130	C2orf70	A6NJV1	201 aa		11.21	□□□□□ -0.61
UBE2F-223	ENST00000612130	UPK2	O00526	184 aa		11.21	□□□□□ -0.61
UBE2F-223	ENST00000612130	IGLL1	P15814	213 aa		11.21	□□□□□ -0.61
UBE2F-223	ENST00000612130	FABP6	P51161	128 aa		11.21	□□□□□ -0.61
UBE2F-223	ENST00000612130	FBLN7	Q53RD9	439 aa		11.21	□□□□□ -0.61
UBE2F-223	ENST00000612130		Q56UQ5	140 aa		11.21	□□□□□ -0.61
UBE2F-223	ENST00000612130	FAM168A	Q92567	244 aa		11.21	□□□□□ -0.61
UBE2F-223	ENST00000612130	FAM167A-AS1	Q96KT0	104 aa		11.21	□□□□□ -0.61
UBE2F-223	ENST00000612130	SLC25A2	Q9BXI2	301 aa		11.21	□□□□□ -0.61
UBE2F-223	ENST00000612130	FZR1	Q9UM11	496 aa		11.21	□□□□□ -0.61
UBE2F-223	ENST00000612130	DNAJC13	O75165	2243 aa		11.21	□□□□□ -0.62
UBE2F-223	ENST00000612130	PSMB11	A5LHX3	300 aa		11.21	□□□□□ -0.62
UBE2F-223	ENST00000612130	AGFG2	O95081	481 aa		11.21	□□□□□ -0.62
UBE2F-223	ENST00000612130	CECR9	P0C854	216 aa		11.21	□□□□□ -0.62
UBE2F-223	ENST00000612130	MYOD1	P15172	320 aa		11.21	□□□□□ -0.62
UBE2F-223	ENST00000612130	GDF5OS	Q5U4N7	250 aa		11.21	□□□□□ -0.62
UBE2F-223	ENST00000612130	MOB3B	Q86TA1	216 aa		11.21	□□□□□ -0.62
UBE2F-223	ENST00000612130	NUP35	Q8NFH5	326 aa		11.21	□□□□□ -0.62
UBE2F-223	ENST00000612130	SSBP3	Q9BWW4	388 aa	Predicted RBP	11.21	□□□□□ -0.62
UBE2F-223	ENST00000612130	ZNF355P	Q9NSJ1	428 aa		11.21	□□□□□ -0.62
UBE2F-223	ENST00000612130	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	11.21	□□□□□ -0.62
UBE2F-223	ENST00000612130	CACNA1D	Q01668	2161 aa		11.2	□□□□□ -0.62
UBE2F-223	ENST00000612130	LOC105371242	A0A075B767	164 aa		11.2	□□□□□ -0.62
UBE2F-223	ENST00000612130	PEX7	O00628	323 aa		11.2	□□□□□ -0.62
UBE2F-223	ENST00000612130	GATA2	P23769	480 aa	Predicted RBP	11.2	□□□□□ -0.62
UBE2F-223	ENST00000612130	CD69	Q07108	199 aa		11.2	□□□□□ -0.62
UBE2F-223	ENST00000612130	GUSBP1	Q15486	140 aa		11.2	□□□□□ -0.62
UBE2F-223	ENST00000612130	C17orf58	Q2M2W7	97 aa		11.2	□□□□□ -0.62
UBE2F-223	ENST00000612130	RNASEK	Q6P5S7	137 aa	Known RBP	11.2	□□□□□ -0.62
UBE2F-223	ENST00000612130	NHLRC2	Q8NBF2	726 aa		11.2	□□□□□ -0.62
UBE2F-223	ENST00000612130	OR9G1	Q8NH87	305 aa		11.2	□□□□□ -0.62
UBE2F-223	ENST00000612130	SNRNP40	Q96DI7	357 aa	Known RBP	11.2	□□□□□ -0.62
UBE2F-223	ENST00000612130	TMEM70	Q9BUB7	260 aa		11.2	□□□□□ -0.62
UBE2F-223	ENST00000612130	ST20	Q9HBF5	79 aa		11.2	□□□□□ -0.62
UBE2F-223	ENST00000612130	RNASE2	P10153	161 aa	Known RBP	11.2	□□□□□ -0.62
UBE2F-223	ENST00000612130	HIST1H1E	P10412	219 aa	Known RBP	11.2	□□□□□ -0.62
UBE2F-223	ENST00000612130	RNFT1	Q5M7Z0	435 aa		11.2	□□□□□ -0.62
UBE2F-223	ENST00000612130	NUDT10	Q8NFP7	164 aa		11.2	□□□□□ -0.62
UBE2F-223	ENST00000612130	OR2Z1	Q8NG97	314 aa		11.2	□□□□□ -0.62
UBE2F-223	ENST00000612130	ZNF596	Q8TC21	504 aa		11.2	□□□□□ -0.62
UBE2F-223	ENST00000612130	CACNG8	Q8WXS5	425 aa		11.2	□□□□□ -0.62
UBE2F-223	ENST00000612130	LEAP2	Q969E1	77 aa		11.2	□□□□□ -0.62
UBE2F-223	ENST00000612130	NUDT11	Q96G61	164 aa		11.2	□□□□□ -0.62
UBE2F-223	ENST00000612130	PRUNE2	Q8WUY3	3088 aa		11.2	□□□□□ -0.62
UBE2F-223	ENST00000612130	KBTBD11-OT1	A0A1B0GTJ5	212 aa		11.19	□□□□□ -0.62
UBE2F-223	ENST00000612130		A0A1B0GXF2	115 aa		11.19	□□□□□ -0.62
UBE2F-223	ENST00000612130	CRX	O43186	299 aa	Predicted RBP	11.19	□□□□□ -0.62
UBE2F-223	ENST00000612130	IGLV1-44	P01699	117 aa		11.19	□□□□□ -0.62
UBE2F-223	ENST00000612130	RPL8	P62917	257 aa	Known RBP	11.19	□□□□□ -0.62
UBE2F-223	ENST00000612130	COTL1	Q14019	142 aa		11.19	□□□□□ -0.62
UBE2F-223	ENST00000612130	LRRC10	Q5BKY1	277 aa		11.19	□□□□□ -0.62
UBE2F-223	ENST00000612130	ZNF329	Q86UD4	541 aa		11.19	□□□□□ -0.62
UBE2F-223	ENST00000612130	LYG1	Q8N1E2	194 aa		11.19	□□□□□ -0.62
UBE2F-223	ENST00000612130	ZNRF1	Q8ND25	227 aa		11.19	□□□□□ -0.62
UBE2F-223	ENST00000612130	SMIM12	Q96EX1	92 aa		11.19	□□□□□ -0.62
UBE2F-223	ENST00000612130	TRAV30	A0A087WSZ9	112 aa		11.18	□□□□□ -0.62
UBE2F-223	ENST00000612130	RPS20	P60866	119 aa	Known RBP	11.18	□□□□□ -0.62
UBE2F-223	ENST00000612130	TMEM30B	Q3MIR4	351 aa		11.18	□□□□□ -0.62
UBE2F-223	ENST00000612130	OR4C5	Q8NGB2	326 aa		11.18	□□□□□ -0.62
UBE2F-223	ENST00000612130	FER1L6-AS2	Q96M78	137 aa		11.18	□□□□□ -0.62
UBE2F-223	ENST00000612130	IGHV3OR15-7	A0A075B7D8	119 aa		11.18	□□□□□ -0.62
UBE2F-223	ENST00000612130	TEX50	A0A1B0GTY4	177 aa		11.18	□□□□□ -0.62
UBE2F-223	ENST00000612130	UTF1	Q5T230	341 aa		11.18	□□□□□ -0.62
UBE2F-223	ENST00000612130		Q6ZVH6	145 aa		11.18	□□□□□ -0.62
UBE2F-223	ENST00000612130	OR1L4	Q8NGR5	311 aa		11.18	□□□□□ -0.62
UBE2F-223	ENST00000612130	C7orf69	Q9H7B7	122 aa		11.18	□□□□□ -0.62
UBE2F-223	ENST00000612130	HIGD1C	A8MV81	97 aa		11.17	□□□□□ -0.62
UBE2F-223	ENST00000612130	DLL1	O00548	723 aa		11.17	□□□□□ -0.62
UBE2F-223	ENST00000612130	TMEM164	Q5U3C3	297 aa		11.17	□□□□□ -0.62
UBE2F-223	ENST00000612130	MORN5	Q5VZ52	161 aa		11.17	□□□□□ -0.62
UBE2F-223	ENST00000612130	VWA1	Q6PCB0	445 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms