RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 NIPSNAP1Q9BPW8 284 aa0.24□□□□□ -2.37
SNORA28-201ENST00000606769 GUCA1BQ9UMX6 200 aa0.24□□□□□ -2.37
SNORA28-201ENST00000606769 NOSIPQ9Y314 301 aaKnown RBP0.24□□□□□ -2.37
SNORA28-201ENST00000606769 EXPH5Q8NEV8 1989 aa0.24□□□□□ -2.37
SNORA28-201ENST00000606769 ADGRB2O60241 1585 aa0.23□□□□□ -2.37
SNORA28-201ENST00000606769 ADCY9O60503 1353 aa0.23□□□□□ -2.37
SNORA28-201ENST00000606769 LOC110117498A0A087WWA1 95 aa0.23□□□□□ -2.37
SNORA28-201ENST00000606769 FAM236DA0A1B0GTK5 79 aa0.23□□□□□ -2.37
SNORA28-201ENST00000606769 FADS1O60427 444 aa0.23□□□□□ -2.37
SNORA28-201ENST00000606769 DCTN3O75935 186 aa0.23□□□□□ -2.37
SNORA28-201ENST00000606769 AHSA1O95433 338 aa0.23□□□□□ -2.37
SNORA28-201ENST00000606769 HLA-DRB1P01911 266 aa0.23□□□□□ -2.37
SNORA28-201ENST00000606769 CALB1P05937 261 aa0.23□□□□□ -2.37
SNORA28-201ENST00000606769 HTR1AP08908 422 aa0.23□□□□□ -2.37
SNORA28-201ENST00000606769 METTL15P1P0C7V9 234 aa0.23□□□□□ -2.37
SNORA28-201ENST00000606769 FAM236CP0DP71 79 aa0.23□□□□□ -2.37
SNORA28-201ENST00000606769 NFYAP23511 347 aaPredicted RBP0.23□□□□□ -2.37
SNORA28-201ENST00000606769 AP2S1P53680 142 aaPredicted RBP0.23□□□□□ -2.37
SNORA28-201ENST00000606769 CDC42P60953 191 aa0.23□□□□□ -2.37
SNORA28-201ENST00000606769 SPCS3P61009 180 aa0.23□□□□□ -2.37
SNORA28-201ENST00000606769 CNBPP62633 177 aaKnown RBP0.23□□□□□ -2.37
SNORA28-201ENST00000606769 RANP62826 216 aaKnown RBP0.23□□□□□ -2.37
SNORA28-201ENST00000606769 UBE2IP63279 158 aaKnown RBP0.23□□□□□ -2.37
SNORA28-201ENST00000606769 HBA1P69905 142 aa0.23□□□□□ -2.37
SNORA28-201ENST00000606769 PDE6HQ13956 83 aa0.23□□□□□ -2.37
SNORA28-201ENST00000606769 KCNJ8Q15842 424 aa0.23□□□□□ -2.37
SNORA28-201ENST00000606769 HIST3H3Q16695 136 aa0.23□□□□□ -2.37
SNORA28-201ENST00000606769 TEX36Q5VZQ5 186 aa0.23□□□□□ -2.37
SNORA28-201ENST00000606769 BPIFA4PQ86YQ2 179 aa0.23□□□□□ -2.37
SNORA28-201ENST00000606769 CLVS1Q8IUQ0 354 aaPredicted RBP0.23□□□□□ -2.37
SNORA28-201ENST00000606769 FAM19A2Q8N3H0 131 aa0.23□□□□□ -2.37
SNORA28-201ENST00000606769 OTUD6BQ8N6M0 293 aa0.23□□□□□ -2.37
SNORA28-201ENST00000606769 IMP4Q96G21 291 aaKnown RBP0.23□□□□□ -2.37
SNORA28-201ENST00000606769 SLC50A1Q9BRV3 221 aa0.23□□□□□ -2.37
SNORA28-201ENST00000606769 ALPK2Q86TB3 2170 aa0.23□□□□□ -2.37
SNORA28-201ENST00000606769 NUP155O75694 1391 aa0.22□□□□□ -2.37
SNORA28-201ENST00000606769 A0A087WUJ7 227 aa0.22□□□□□ -2.37
SNORA28-201ENST00000606769 TRAV1-1A0A0B4J248 108 aa0.22□□□□□ -2.37
SNORA28-201ENST00000606769 TRAV26-2A0A0B4J265 109 aa0.22□□□□□ -2.37
SNORA28-201ENST00000606769 EXOC1LA0A1B0GW35 172 aa0.22□□□□□ -2.37
SNORA28-201ENST00000606769 DPRXA6NFQ7 191 aa0.22□□□□□ -2.37
SNORA28-201ENST00000606769 OR4C46A6NHA9 309 aa0.22□□□□□ -2.37
SNORA28-201ENST00000606769 GOLGA6L19H0YKK7 550 aa0.22□□□□□ -2.37
SNORA28-201ENST00000606769 GEMIN2O14893 280 aaKnown RBP0.22□□□□□ -2.37
SNORA28-201ENST00000606769 NIPSNAP2O75323 286 aa0.22□□□□□ -2.37
SNORA28-201ENST00000606769 LYZL6O75951 148 aa0.22□□□□□ -2.37
SNORA28-201ENST00000606769 LYPLA2O95372 231 aa0.22□□□□□ -2.37
SNORA28-201ENST00000606769 IFNA16P05015 189 aa0.22□□□□□ -2.37
SNORA28-201ENST00000606769 MIFP14174 115 aa0.22□□□□□ -2.37
SNORA28-201ENST00000606769 LSM6P62312 80 aaKnown RBP0.22□□□□□ -2.37
SNORA28-201ENST00000606769 STX5Q13190 355 aa0.22□□□□□ -2.37
SNORA28-201ENST00000606769 NDUFA5Q16718 116 aa0.22□□□□□ -2.37
SNORA28-201ENST00000606769 DEFB113Q30KQ7 82 aa0.22□□□□□ -2.37
SNORA28-201ENST00000606769 SPANXN3Q5MJ09 141 aa0.22□□□□□ -2.37
SNORA28-201ENST00000606769 LPCAT3Q6P1A2 487 aa0.22□□□□□ -2.37
SNORA28-201ENST00000606769 RPL22L1Q6P5R6 122 aaKnown RBP0.22□□□□□ -2.37
SNORA28-201ENST00000606769 LINC00311Q8N616 119 aa0.22□□□□□ -2.37
SNORA28-201ENST00000606769 OR8J2Q8NGG1 315 aa0.22□□□□□ -2.37
SNORA28-201ENST00000606769 OR4C6Q8NH72 309 aa0.22□□□□□ -2.37
SNORA28-201ENST00000606769 TMEM106AQ96A25 262 aa0.22□□□□□ -2.37
SNORA28-201ENST00000606769 ADAT3Q96EY9 351 aaPredicted RBP0.22□□□□□ -2.37
SNORA28-201ENST00000606769 RNASE7Q9H1E1 156 aaKnown RBP0.22□□□□□ -2.37
SNORA28-201ENST00000606769 ZFP30Q9Y2G7 519 aa0.22□□□□□ -2.37
SNORA28-201ENST00000606769 ANAPC1Q9H1A4 1944 aa0.22□□□□□ -2.37
SNORA28-201ENST00000606769 ZNF106Q9H2Y7 1883 aaKnown RBP0.22□□□□□ -2.37
SNORA28-201ENST00000606769 MED12LQ86YW9 2145 aa0.22□□□□□ -2.37
SNORA28-201ENST00000606769 MCM3APO60318 1980 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 DOCK5Q9H7D0 1870 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 TRAV14DV4A0A0A6YYC5 116 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 IGKV1-9A0A0C4DH69 117 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 A0A1B0GV50 99 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 SMIM9A6NGZ8 99 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 CLDN24A6NM45 220 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 KPNA3O00505 521 aaPredicted RBP0.21□□□□□ -2.38
SNORA28-201ENST00000606769 OR1I1O60431 355 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 OR5F1O95221 314 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 CNIH1O95406 144 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 TTRP02766 147 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 SERPINA6P08185 405 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 SMIM10L2AP0DMW4 78 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 SMIM10L2BP0DMW5 78 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 PRB4P10163 310 aaPredicted RBP0.21□□□□□ -2.38
SNORA28-201ENST00000606769 ZNF93P35789 620 aaPredicted RBP0.21□□□□□ -2.38
SNORA28-201ENST00000606769 SSR2P43308 183 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 MYL6P60660 151 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 MAGOHP61326 146 aaKnown RBP0.21□□□□□ -2.38
SNORA28-201ENST00000606769 LINC01554Q52M75 96 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 HIST2H3PS2Q5TEC6 136 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 MIR17HGQ75NE6 70 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 AAED1Q7RTV5 226 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 DEFB128Q7Z7B8 93 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 RPS19BP1Q86WX3 136 aaKnown RBP0.21□□□□□ -2.38
SNORA28-201ENST00000606769 IQCF2Q8IXL9 164 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 C20orf196Q8IYI0 205 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 CLDN22Q8N7P3 220 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 SIGLECL1Q8N7X8 197 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 C12orf29Q8N999 325 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 WFDC11Q8NEX6 87 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 OR5A1Q8NGJ0 315 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 WFDC5Q8TCV5 224 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms