RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 GGTLC1Q9BX51 225 aa16.88■□□□□ 0.29
SSBP4-209ENST00000601357 COPZ2Q9P299 210 aa16.88■□□□□ 0.29
SSBP4-209ENST00000601357 NUPL2O15504 423 aaKnown RBP16.87■□□□□ 0.29
SSBP4-209ENST00000601357 CTSDP07339 412 aaPredicted RBP16.87■□□□□ 0.29
SSBP4-209ENST00000601357 AKR1C2P52895 323 aa16.87■□□□□ 0.29
SSBP4-209ENST00000601357 ERHP84090 104 aaKnown RBP16.87■□□□□ 0.29
SSBP4-209ENST00000601357 RELQ04864 619 aaPredicted RBP16.87■□□□□ 0.29
SSBP4-209ENST00000601357 SP6Q3SY56 376 aa16.87■□□□□ 0.29
SSBP4-209ENST00000601357 SCGB2B2Q4G0G5 96 aa16.87■□□□□ 0.29
SSBP4-209ENST00000601357 PVRIGQ6DKI7 326 aa16.87■□□□□ 0.29
SSBP4-209ENST00000601357 CLVS1Q8IUQ0 354 aaPredicted RBP16.87■□□□□ 0.29
SSBP4-209ENST00000601357 CCDC71LQ8N9Z2 235 aa16.87■□□□□ 0.29
SSBP4-209ENST00000601357 RAB2BQ8WUD1 216 aa16.87■□□□□ 0.29
SSBP4-209ENST00000601357 NXF2Q9GZY0 626 aaKnown RBP16.87■□□□□ 0.29
SSBP4-209ENST00000601357 CCDC59Q9P031 241 aaKnown RBP16.87■□□□□ 0.29
SSBP4-209ENST00000601357 LOC102724200A0A096LPH7 203 aaPredicted RBP16.86■□□□□ 0.29
SSBP4-209ENST00000601357 CTDSPLO15194 276 aa16.86■□□□□ 0.29
SSBP4-209ENST00000601357 ST8SIA3O43173 380 aa16.86■□□□□ 0.29
SSBP4-209ENST00000601357 ZNF207O43670 478 aaKnown RBP16.86■□□□□ 0.29
SSBP4-209ENST00000601357 B3GALNT1O75752 331 aa16.86■□□□□ 0.29
SSBP4-209ENST00000601357 ATG12O94817 140 aa16.86■□□□□ 0.29
SSBP4-209ENST00000601357 SPINK9Q5DT21 86 aa16.86■□□□□ 0.29
SSBP4-209ENST00000601357 LAMTOR1Q6IAA8 161 aa16.86■□□□□ 0.29
SSBP4-209ENST00000601357 FAAP20Q6NZ36 180 aa16.86■□□□□ 0.29
SSBP4-209ENST00000601357 BCL7BQ9BQE9 202 aa16.86■□□□□ 0.29
SSBP4-209ENST00000601357 SMPXQ9UHP9 88 aa16.86■□□□□ 0.29
SSBP4-209ENST00000601357 A0A0G2JRQ6 117 aa16.85■□□□□ 0.29
SSBP4-209ENST00000601357 LCE6AA0A183 80 aa16.85■□□□□ 0.29
SSBP4-209ENST00000601357 IGHV3-48P01763 117 aa16.85■□□□□ 0.29
SSBP4-209ENST00000601357 TMBIM6P55061 237 aa16.85■□□□□ 0.29
SSBP4-209ENST00000601357 MEF2DQ14814 521 aa16.85■□□□□ 0.29
SSBP4-209ENST00000601357 TRIM16LQ309B1 348 aa16.85■□□□□ 0.29
SSBP4-209ENST00000601357 RTBDNQ9BSG5 229 aaPredicted RBP16.85■□□□□ 0.29
SSBP4-209ENST00000601357 ODF3L2Q3SX64 289 aa16.84■□□□□ 0.29
SSBP4-209ENST00000601357 AARDQ4LEZ3 155 aa16.84■□□□□ 0.29
SSBP4-209ENST00000601357 SLC35G3Q8N808 338 aa16.84■□□□□ 0.29
SSBP4-209ENST00000601357 PINX1Q96BK5 328 aaKnown RBP16.84■□□□□ 0.29
SSBP4-209ENST00000601357 TMEM222Q9H0R3 208 aa16.84■□□□□ 0.29
SSBP4-209ENST00000601357 IGHV7-4-1A0A0J9YVY3 117 aa16.83■□□□□ 0.28
SSBP4-209ENST00000601357 CHEK1O14757 476 aa16.83■□□□□ 0.28
SSBP4-209ENST00000601357 CDS2O95674 445 aa16.83■□□□□ 0.28
SSBP4-209ENST00000601357 IFNA17P01571 189 aa16.83■□□□□ 0.28
SSBP4-209ENST00000601357 SURF2Q15527 256 aaPredicted RBP16.83■□□□□ 0.28
SSBP4-209ENST00000601357 DIRAS2Q96HU8 199 aa16.83■□□□□ 0.28
SSBP4-209ENST00000601357 RNF2Q99496 336 aa16.83■□□□□ 0.28
SSBP4-209ENST00000601357 OVOL2Q9BRP0 275 aa16.83■□□□□ 0.28
SSBP4-209ENST00000601357 RABL2AQ9UBK7 228 aaPredicted RBP16.83■□□□□ 0.28
SSBP4-209ENST00000601357 RABL2BQ9UNT1 228 aa16.83■□□□□ 0.28
SSBP4-209ENST00000601357 GNG7O60262 68 aa16.82■□□□□ 0.28
SSBP4-209ENST00000601357 RNASE2P10153 161 aaKnown RBP16.82■□□□□ 0.28
SSBP4-209ENST00000601357 SNCAP37840 140 aa16.82■□□□□ 0.28
SSBP4-209ENST00000601357 Q6ZRM9 215 aa16.82■□□□□ 0.28
SSBP4-209ENST00000601357 OR4C16Q8NGL9 310 aa16.82■□□□□ 0.28
SSBP4-209ENST00000601357 GLYATL2Q8WU03 294 aa16.82■□□□□ 0.28
SSBP4-209ENST00000601357 RRNAD1Q96FB5 475 aaKnown RBP16.82■□□□□ 0.28
SSBP4-209ENST00000601357 RHPN1-AS1Q9BWJ2 59 aa16.82■□□□□ 0.28
SSBP4-209ENST00000601357 UBQLN2Q9UHD9 624 aa16.82■□□□□ 0.28
SSBP4-209ENST00000601357 OR4C46A6NHA9 309 aa16.81■□□□□ 0.28
SSBP4-209ENST00000601357 DISC1C4P0D8 188 aa16.81■□□□□ 0.28
SSBP4-209ENST00000601357 YIF1AO95070 293 aa16.81■□□□□ 0.28
SSBP4-209ENST00000601357 OR5AC1P0C628 307 aa16.81■□□□□ 0.28
SSBP4-209ENST00000601357 AKAIN1P0CW23 69 aa16.81■□□□□ 0.28
SSBP4-209ENST00000601357 ETV6P41212 452 aa16.81■□□□□ 0.28
SSBP4-209ENST00000601357 IL18Q14116 193 aa16.81■□□□□ 0.28
SSBP4-209ENST00000601357 BSXQ3C1V8 233 aa16.81■□□□□ 0.28
SSBP4-209ENST00000601357 FAM219AQ8IW50 185 aa16.81■□□□□ 0.28
SSBP4-209ENST00000601357 TMEM116Q8NCL8 245 aa16.81■□□□□ 0.28
SSBP4-209ENST00000601357 IL17DQ8TAD2 202 aa16.81■□□□□ 0.28
SSBP4-209ENST00000601357 LHFPL5Q8TAF8 219 aa16.81■□□□□ 0.28
SSBP4-209ENST00000601357 PDCD10Q9BUL8 212 aa16.81■□□□□ 0.28
SSBP4-209ENST00000601357 SLIRPQ9GZT3 109 aaKnown RBP16.81■□□□□ 0.28
SSBP4-209ENST00000601357 GPR132Q9UNW8 380 aa16.81■□□□□ 0.28
SSBP4-209ENST00000601357 C14orf166Q9Y224 244 aaKnown RBP16.81■□□□□ 0.28
SSBP4-209ENST00000601357 TEX13DA0A0J9YY54 714 aaPredicted RBP16.8■□□□□ 0.28
SSBP4-209ENST00000601357 CORTO00230 105 aa16.8■□□□□ 0.28
SSBP4-209ENST00000601357 GSTZ1O43708 216 aaPredicted RBP16.8■□□□□ 0.28
SSBP4-209ENST00000601357 FAM90A2PQ658T7 463 aa16.8■□□□□ 0.28
SSBP4-209ENST00000601357 DUSP18Q8NEJ0 188 aa16.8■□□□□ 0.28
SSBP4-209ENST00000601357 NAA60Q9H7X0 242 aa16.8■□□□□ 0.28
SSBP4-209ENST00000601357 TRAV14DV4A0A0A6YYC5 116 aa16.79■□□□□ 0.28
SSBP4-209ENST00000601357 ANKRD20A5PA0PJZ0 165 aa16.79■□□□□ 0.28
SSBP4-209ENST00000601357 CRYM-AS1A6NIL9 109 aa16.79■□□□□ 0.28
SSBP4-209ENST00000601357 H3BMQ9 156 aa16.79■□□□□ 0.28
SSBP4-209ENST00000601357 NPBWR1P48145 328 aa16.79■□□□□ 0.28
SSBP4-209ENST00000601357 HOXA1P49639 335 aaPredicted RBP16.79■□□□□ 0.28
SSBP4-209ENST00000601357 TOMM20LQ6UXN7 152 aa16.79■□□□□ 0.28
SSBP4-209ENST00000601357 RBPMSQ93062 196 aaKnown RBP16.79■□□□□ 0.28
SSBP4-209ENST00000601357 SOSTQ9BQB4 213 aa16.79■□□□□ 0.28
SSBP4-209ENST00000601357 DNAH1Q9P2D7 4330 aa16.78■□□□□ 0.28
SSBP4-209ENST00000601357 IGHV3-49A0A0A0MS15 119 aa16.78■□□□□ 0.28
SSBP4-209ENST00000601357 TMEM50AO95807 157 aa16.78■□□□□ 0.28
SSBP4-209ENST00000601357 RPL5P46777 297 aaKnown RBP16.78■□□□□ 0.28
SSBP4-209ENST00000601357 SUB1P53999 127 aaKnown RBP eCLIP16.78■□□□□ 0.28
SSBP4-209ENST00000601357 APOC4P55056 127 aa16.78■□□□□ 0.28
SSBP4-209ENST00000601357 Q6ZWC4 215 aa16.78■□□□□ 0.28
SSBP4-209ENST00000601357 SELENOHQ8IZQ5 122 aaKnown RBP16.78■□□□□ 0.28
SSBP4-209ENST00000601357 OR51S1Q8NGJ8 323 aa16.78■□□□□ 0.28
SSBP4-209ENST00000601357 OR52E5Q8NH55 327 aa16.78■□□□□ 0.28
SSBP4-209ENST00000601357 RNASE11Q8TAA1 199 aaKnown RBP16.78■□□□□ 0.28
SSBP4-209ENST00000601357 PRRT1Q99946 306 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms