RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 DBX1A6NMT0 343 aa10.72□□□□□ -0.69
LIG1-218ENST00000599322 NDUFA4O00483 81 aa10.72□□□□□ -0.69
LIG1-218ENST00000599322 ST8SIA3O43173 380 aa10.72□□□□□ -0.69
LIG1-218ENST00000599322 GNG7O60262 68 aa10.72□□□□□ -0.69
LIG1-218ENST00000599322 IGKV1-5P01602 117 aa10.72□□□□□ -0.69
LIG1-218ENST00000599322 AKR1C4P17516 323 aa10.72□□□□□ -0.69
LIG1-218ENST00000599322 SRPXP78539 464 aa10.72□□□□□ -0.69
LIG1-218ENST00000599322 TMEM268Q5VZI3 342 aa10.72□□□□□ -0.69
LIG1-218ENST00000599322 NOXA1Q86UR1 476 aa10.72□□□□□ -0.69
LIG1-218ENST00000599322 ZNF114Q8NC26 417 aa10.72□□□□□ -0.69
LIG1-218ENST00000599322 DUSP18Q8NEJ0 188 aa10.72□□□□□ -0.69
LIG1-218ENST00000599322 SOSTQ9BQB4 213 aa10.72□□□□□ -0.69
LIG1-218ENST00000599322 NEURL2Q9BR09 285 aa10.72□□□□□ -0.69
LIG1-218ENST00000599322 C20orf24Q9BUV8 137 aa10.72□□□□□ -0.69
LIG1-218ENST00000599322 C5orf66Q9H5L9 145 aa10.72□□□□□ -0.69
LIG1-218ENST00000599322 NDUFA13Q9P0J0 144 aa10.72□□□□□ -0.69
LIG1-218ENST00000599322 TRAV25A0A0B4J276 109 aa10.71□□□□□ -0.69
LIG1-218ENST00000599322 A0A0B4J293 547 aa10.71□□□□□ -0.69
LIG1-218ENST00000599322 IGHV3-35A0A0C4DH35 117 aa10.71□□□□□ -0.69
LIG1-218ENST00000599322 A8MZ25 164 aa10.71□□□□□ -0.69
LIG1-218ENST00000599322 YIF1AO95070 293 aa10.71□□□□□ -0.69
LIG1-218ENST00000599322 MT-CO2P00403 227 aa10.71□□□□□ -0.69
LIG1-218ENST00000599322 BMI1P35226 326 aa10.71□□□□□ -0.69
LIG1-218ENST00000599322 ETV6P41212 452 aa10.71□□□□□ -0.69
LIG1-218ENST00000599322 SPCS3P61009 180 aa10.71□□□□□ -0.69
LIG1-218ENST00000599322 IZUMO4Q1ZYL8 232 aa10.71□□□□□ -0.69
LIG1-218ENST00000599322 TM4SF20Q53R12 229 aa10.71□□□□□ -0.69
LIG1-218ENST00000599322 SPINK9Q5DT21 86 aa10.71□□□□□ -0.69
LIG1-218ENST00000599322 Q8N1Y9 231 aa10.71□□□□□ -0.69
LIG1-218ENST00000599322 GLYATL2Q8WU03 294 aa10.71□□□□□ -0.69
LIG1-218ENST00000599322 IL22RA2Q969J5 263 aa10.71□□□□□ -0.69
LIG1-218ENST00000599322 ZNF436Q9C0F3 470 aaPredicted RBP10.71□□□□□ -0.69
LIG1-218ENST00000599322 HEYLQ9NQ87 328 aaPredicted RBP10.71□□□□□ -0.69
LIG1-218ENST00000599322 DAZ1Q9NQZ3 744 aaKnown RBP10.71□□□□□ -0.69
LIG1-218ENST00000599322 TMEM213A2RRL7 107 aa10.7□□□□□ -0.7
LIG1-218ENST00000599322 CEBPZOSA8MTT3 80 aa10.7□□□□□ -0.7
LIG1-218ENST00000599322 INS-IGF2F8WCM5 200 aa10.7□□□□□ -0.7
LIG1-218ENST00000599322 K7EIM0 57 aa10.7□□□□□ -0.7
LIG1-218ENST00000599322 K7EMT4 169 aa10.7□□□□□ -0.7
LIG1-218ENST00000599322 MFAP2P55001 183 aa10.7□□□□□ -0.7
LIG1-218ENST00000599322 TRIQKQ629K1 86 aa10.7□□□□□ -0.7
LIG1-218ENST00000599322 SBSPONQ8IVN8 264 aa10.7□□□□□ -0.7
LIG1-218ENST00000599322 SELENOHQ8IZQ5 122 aaKnown RBP10.7□□□□□ -0.7
LIG1-218ENST00000599322 LGI3Q8N145 548 aa10.7□□□□□ -0.7
LIG1-218ENST00000599322 OR52B4Q8NGK2 314 aa10.7□□□□□ -0.7
LIG1-218ENST00000599322 OR52E5Q8NH55 327 aa10.7□□□□□ -0.7
LIG1-218ENST00000599322 TMEM190Q8WZ59 177 aa10.7□□□□□ -0.7
LIG1-218ENST00000599322 SLC25A21Q9BQT8 299 aaPredicted RBP10.7□□□□□ -0.7
LIG1-218ENST00000599322 HIPK2Q9H2X6 1198 aa10.7□□□□□ -0.7
LIG1-218ENST00000599322 TENM3Q9P273 2699 aa10.7□□□□□ -0.7
LIG1-218ENST00000599322 RPS10-NUDT3A0A1W2PQS6 291 aa10.69□□□□□ -0.7
LIG1-218ENST00000599322 IZUMO1RA6ND01 250 aa10.69□□□□□ -0.7
LIG1-218ENST00000599322 SULT1A3P0DMM9 295 aa10.69□□□□□ -0.7
LIG1-218ENST00000599322 SULT1A4P0DMN0 295 aa10.69□□□□□ -0.7
LIG1-218ENST00000599322 FCGR2BP31994 310 aaPredicted RBP10.69□□□□□ -0.7
LIG1-218ENST00000599322 HTR2BP41595 481 aa10.69□□□□□ -0.7
LIG1-218ENST00000599322 BTNL8Q6UX41 500 aa10.69□□□□□ -0.7
LIG1-218ENST00000599322 TMED4Q7Z7H5 227 aa10.69□□□□□ -0.7
LIG1-218ENST00000599322 CACNG8Q8WXS5 425 aa10.69□□□□□ -0.7
LIG1-218ENST00000599322 GALNT14Q96FL9 552 aa10.69□□□□□ -0.7
LIG1-218ENST00000599322 GINS3Q9BRX5 216 aa10.69□□□□□ -0.7
LIG1-218ENST00000599322 CACNG5Q9UF02 275 aa10.69□□□□□ -0.7
LIG1-218ENST00000599322 TMEM56-RWDD3S4R434 201 aa10.69□□□□□ -0.7
LIG1-218ENST00000599322 C15orf62A8K5M9 175 aa10.68□□□□□ -0.7
LIG1-218ENST00000599322 ZNF785A8K8V0 405 aa10.68□□□□□ -0.7
LIG1-218ENST00000599322 CENPXA8MT69 81 aa10.68□□□□□ -0.7
LIG1-218ENST00000599322 OR11H12B2RN74 326 aa10.68□□□□□ -0.7
LIG1-218ENST00000599322 I3L2K1 104 aa10.68□□□□□ -0.7
LIG1-218ENST00000599322 SCAF4O95104 1147 aaKnown RBP10.68□□□□□ -0.7
LIG1-218ENST00000599322 P0C879 139 aa10.68□□□□□ -0.7
LIG1-218ENST00000599322 OPRK1P41145 380 aa10.68□□□□□ -0.7
LIG1-218ENST00000599322 UNQ9165/PRO28630Q6UXU0 137 aa10.68□□□□□ -0.7
LIG1-218ENST00000599322 ADAMTSL5Q6ZMM2 481 aa10.68□□□□□ -0.7
LIG1-218ENST00000599322 WDR89Q96FK6 387 aaPredicted RBP10.68□□□□□ -0.7
LIG1-218ENST00000599322 RCHY1Q96PM5 261 aa10.68□□□□□ -0.7
LIG1-218ENST00000599322 SPATA25Q9BR10 227 aa10.68□□□□□ -0.7
LIG1-218ENST00000599322 CHRDL1Q9BU40 450 aa10.68□□□□□ -0.7
LIG1-218ENST00000599322 RBM38Q9H0Z9 239 aaKnown RBP10.68□□□□□ -0.7
LIG1-218ENST00000599322 C19orf73Q9NVV2 129 aa10.68□□□□□ -0.7
LIG1-218ENST00000599322 A0A0B4J2A0 478 aa10.67□□□□□ -0.7
LIG1-218ENST00000599322 CTSGP08311 255 aa10.67□□□□□ -0.7
LIG1-218ENST00000599322 C8orf88P0DMB2 117 aa10.67□□□□□ -0.7
LIG1-218ENST00000599322 CCR6P51684 374 aa10.67□□□□□ -0.7
LIG1-218ENST00000599322 KLF9Q13886 244 aaPredicted RBP10.67□□□□□ -0.7
LIG1-218ENST00000599322 TMEM128Q5BJH2 165 aa10.67□□□□□ -0.7
LIG1-218ENST00000599322 ETFRF1Q6IPR1 90 aa10.67□□□□□ -0.7
LIG1-218ENST00000599322 CCDC190Q86UF4 302 aa10.67□□□□□ -0.7
LIG1-218ENST00000599322 TMEM61Q8N0U2 210 aa10.67□□□□□ -0.7
LIG1-218ENST00000599322 GPR146Q96CH1 333 aa10.67□□□□□ -0.7
LIG1-218ENST00000599322 NARS2Q96I59 477 aaKnown RBP10.67□□□□□ -0.7
LIG1-218ENST00000599322 MLXQ9UH92 298 aa10.67□□□□□ -0.7
LIG1-218ENST00000599322 SHPKQ9UHJ6 478 aa10.67□□□□□ -0.7
LIG1-218ENST00000599322 V9GYH0 126 aa10.67□□□□□ -0.7
LIG1-218ENST00000599322 HUWE1Q7Z6Z7 4374 aaKnown RBP10.67□□□□□ -0.7
LIG1-218ENST00000599322 TRAV30A0A087WSZ9 112 aa10.66□□□□□ -0.7
LIG1-218ENST00000599322 TRAV14DV4A0A0A6YYC5 116 aa10.66□□□□□ -0.7
LIG1-218ENST00000599322 NAP1L6A6NFF2 107 aa10.66□□□□□ -0.7
LIG1-218ENST00000599322 CD5P06127 495 aa10.66□□□□□ -0.7
LIG1-218ENST00000599322 VAMP1P23763 118 aa10.66□□□□□ -0.7
LIG1-218ENST00000599322 CMC4P56277 68 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms