RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14□□□□□ -0.17
LIG1-216ENST00000598938 MFSD2BA6NFX1 497 aa14□□□□□ -0.17
LIG1-216ENST00000598938 LINC01619G3V211 115 aa14□□□□□ -0.17
LIG1-216ENST00000598938 G3V4G9 280 aa14□□□□□ -0.17
LIG1-216ENST00000598938 HTR2BP41595 481 aa14□□□□□ -0.17
LIG1-216ENST00000598938 C11orf87Q6NUJ2 197 aa14□□□□□ -0.17
LIG1-216ENST00000598938 UXS1Q8NBZ7 420 aa14□□□□□ -0.17
LIG1-216ENST00000598938 WFDC9Q8NEX5 89 aa14□□□□□ -0.17
LIG1-216ENST00000598938 OR4D5Q8NGN0 318 aa14□□□□□ -0.17
LIG1-216ENST00000598938 VN1R17PQ8TDU5 208 aa14□□□□□ -0.17
LIG1-216ENST00000598938 DTD1Q8TEA8 209 aa14□□□□□ -0.17
LIG1-216ENST00000598938 EEF1AKMT3Q96AZ1 226 aa14□□□□□ -0.17
LIG1-216ENST00000598938 OR10C1Q96KK4 312 aa14□□□□□ -0.17
LIG1-216ENST00000598938 CXorf58Q96LI9 332 aa14□□□□□ -0.17
LIG1-216ENST00000598938 PEF1Q9UBV8 284 aaKnown RBP14□□□□□ -0.17
LIG1-216ENST00000598938 KMT2CQ8NEZ4 4911 aaKnown RBP13.99□□□□□ -0.17
LIG1-216ENST00000598938 ANKRD34BA5PLL1 514 aa13.99□□□□□ -0.17
LIG1-216ENST00000598938 K7EIM0 57 aa13.99□□□□□ -0.17
LIG1-216ENST00000598938 CCSO14618 274 aa13.99□□□□□ -0.17
LIG1-216ENST00000598938 TRBV12-3P01733 135 aa13.99□□□□□ -0.17
LIG1-216ENST00000598938 OR8U8P0C7N1 319 aa13.99□□□□□ -0.17
LIG1-216ENST00000598938 SUB1P53999 127 aaKnown RBP eCLIP13.99□□□□□ -0.17
LIG1-216ENST00000598938 IAH1Q2TAA2 248 aaPredicted RBP13.99□□□□□ -0.17
LIG1-216ENST00000598938 FAM209BQ5JX69 171 aa13.99□□□□□ -0.17
LIG1-216ENST00000598938 ZBTB8BQ8NAP8 495 aaPredicted RBP13.99□□□□□ -0.17
LIG1-216ENST00000598938 DPF1Q92782 380 aa13.99□□□□□ -0.17
LIG1-216ENST00000598938 CCDC140Q96MF4 163 aa13.99□□□□□ -0.17
LIG1-216ENST00000598938 HIPK2Q9H2X6 1198 aa13.99□□□□□ -0.17
LIG1-216ENST00000598938 RANGRFQ9HD47 186 aaPredicted RBP13.99□□□□□ -0.17
LIG1-216ENST00000598938 S4R3C0 116 aa13.99□□□□□ -0.17
LIG1-216ENST00000598938 TRBV7-1A0A0A6YYK4 115 aa13.98□□□□□ -0.17
LIG1-216ENST00000598938 I3L2K1 104 aa13.98□□□□□ -0.17
LIG1-216ENST00000598938 MED6O75586 246 aa13.98□□□□□ -0.17
LIG1-216ENST00000598938 ID3Q02535 119 aa13.98□□□□□ -0.17
LIG1-216ENST00000598938 RGS21Q2M5E4 152 aa13.98□□□□□ -0.17
LIG1-216ENST00000598938 C2orf83Q53S99 150 aa13.98□□□□□ -0.17
LIG1-216ENST00000598938 ZNF502Q8TBZ5 544 aa13.98□□□□□ -0.17
LIG1-216ENST00000598938 MISP3Q96FF7 219 aa13.98□□□□□ -0.17
LIG1-216ENST00000598938 C7orf66A4D0T2 115 aa13.97□□□□□ -0.17
LIG1-216ENST00000598938 SYNGR2O43760 224 aa13.97□□□□□ -0.17
LIG1-216ENST00000598938 IGHV3-23P01764 117 aa13.97□□□□□ -0.17
LIG1-216ENST00000598938 SLC24A4Q8NFF2 622 aa13.97□□□□□ -0.17
LIG1-216ENST00000598938 TMEM170AQ8WVE7 144 aa13.97□□□□□ -0.17
LIG1-216ENST00000598938 MAGT1Q9H0U3 335 aa13.97□□□□□ -0.17
LIG1-216ENST00000598938 U3KQ87 197 aa13.97□□□□□ -0.17
LIG1-216ENST00000598938 IGHV3-21A0A0B4J1V1 117 aa13.96□□□□□ -0.17
LIG1-216ENST00000598938 CORTO00230 105 aa13.96□□□□□ -0.17
LIG1-216ENST00000598938 BMPR1BO00238 502 aa13.96□□□□□ -0.17
LIG1-216ENST00000598938 MT-CO2P00403 227 aa13.96□□□□□ -0.17
LIG1-216ENST00000598938 CD33P20138 364 aa13.96□□□□□ -0.17
LIG1-216ENST00000598938 NPY1RP25929 384 aa13.96□□□□□ -0.17
LIG1-216ENST00000598938 HOXD3P31249 432 aaPredicted RBP13.96□□□□□ -0.17
LIG1-216ENST00000598938 NKX2-1P43699 371 aaPredicted RBP13.96□□□□□ -0.17
LIG1-216ENST00000598938 SLURP1P55000 103 aa13.96□□□□□ -0.17
LIG1-216ENST00000598938 TATDN3Q17R31 274 aa13.96□□□□□ -0.17
LIG1-216ENST00000598938 CLEC19AQ6UXS0 136 aa13.96□□□□□ -0.17
LIG1-216ENST00000598938 SCARB1Q8WTV0 552 aa13.96□□□□□ -0.17
LIG1-216ENST00000598938 ATP6V0BQ99437 205 aa13.96□□□□□ -0.17
LIG1-216ENST00000598938 C5orf51A6NDU8 294 aa13.95□□□□□ -0.18
LIG1-216ENST00000598938 FAM25EA8MYX2 175 aa13.95□□□□□ -0.18
LIG1-216ENST00000598938 IAPPP10997 89 aa13.95□□□□□ -0.18
LIG1-216ENST00000598938 ZP3P21754 424 aa13.95□□□□□ -0.18
LIG1-216ENST00000598938 ATP5IP56385 69 aaPredicted RBP13.95□□□□□ -0.18
LIG1-216ENST00000598938 NOXA1Q86UR1 476 aa13.95□□□□□ -0.18
LIG1-216ENST00000598938 CIB3Q96Q77 187 aaPredicted RBP13.95□□□□□ -0.18
LIG1-216ENST00000598938 C21orf62Q9NYP8 219 aa13.95□□□□□ -0.18
LIG1-216ENST00000598938 GSKIPQ9P0R6 139 aa13.95□□□□□ -0.18
LIG1-216ENST00000598938 PPP5D1E7EU14 171 aa13.94□□□□□ -0.18
LIG1-216ENST00000598938 F8W735 103 aaPredicted RBP13.94□□□□□ -0.18
LIG1-216ENST00000598938 LY86O95711 162 aa13.94□□□□□ -0.18
LIG1-216ENST00000598938 IFNA10P01566 189 aa13.94□□□□□ -0.18
LIG1-216ENST00000598938 POLR2GP62487 172 aaKnown RBP eCLIP13.94□□□□□ -0.18
LIG1-216ENST00000598938 OXA1LQ15070 435 aa13.94□□□□□ -0.18
LIG1-216ENST00000598938 GSG1LQ6UXU4 331 aa13.94□□□□□ -0.18
LIG1-216ENST00000598938 MRAPQ8TCY5 172 aa13.94□□□□□ -0.18
LIG1-216ENST00000598938 RNASEH2CQ8TDP1 164 aaKnown RBP13.94□□□□□ -0.18
LIG1-216ENST00000598938 DCUN1D4Q92564 292 aa13.94□□□□□ -0.18
LIG1-216ENST00000598938 DLX4Q92988 240 aaPredicted RBP13.94□□□□□ -0.18
LIG1-216ENST00000598938 PINX1Q96BK5 328 aaKnown RBP13.94□□□□□ -0.18
LIG1-216ENST00000598938 C2orf50Q96LR7 162 aa13.94□□□□□ -0.18
LIG1-216ENST00000598938 ALG5Q9Y673 324 aa13.94□□□□□ -0.18
LIG1-216ENST00000598938 DNAH3Q8TD57 4116 aa13.93□□□□□ -0.18
LIG1-216ENST00000598938 WRBO00258 174 aa13.93□□□□□ -0.18
LIG1-216ENST00000598938 GGCTO75223 188 aaKnown RBP13.93□□□□□ -0.18
LIG1-216ENST00000598938 MBPP02686 304 aaPredicted RBP13.93□□□□□ -0.18
LIG1-216ENST00000598938 CLEC3BP05452 202 aa13.93□□□□□ -0.18
LIG1-216ENST00000598938 FCGR2BP31994 310 aaPredicted RBP13.93□□□□□ -0.18
LIG1-216ENST00000598938 GPR183P32249 361 aa13.93□□□□□ -0.18
LIG1-216ENST00000598938 ARL3P36405 182 aa13.93□□□□□ -0.18
LIG1-216ENST00000598938 KLF5Q13887 457 aaPredicted RBP13.93□□□□□ -0.18
LIG1-216ENST00000598938 RCC1LQ96I51 464 aaKnown RBP13.93□□□□□ -0.18
LIG1-216ENST00000598938 TXN2Q99757 166 aa13.93□□□□□ -0.18
LIG1-216ENST00000598938 FNDC4Q9H6D8 234 aaPredicted RBP13.93□□□□□ -0.18
LIG1-216ENST00000598938 C15orf62A8K5M9 175 aa13.92□□□□□ -0.18
LIG1-216ENST00000598938 GOSR2O14653 212 aa13.92□□□□□ -0.18
LIG1-216ENST00000598938 SSNA1O43805 119 aa13.92□□□□□ -0.18
LIG1-216ENST00000598938 SCGB1D2O95969 90 aa13.92□□□□□ -0.18
LIG1-216ENST00000598938 MFAP4P55083 255 aa13.92□□□□□ -0.18
LIG1-216ENST00000598938 IL15RAQ13261 267 aa13.92□□□□□ -0.18
LIG1-216ENST00000598938 RPEL1Q2QD12 228 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms