RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 ST8SIA3O43173 380 aa9.73□□□□□ -0.85
LIG1-212ENST00000596549 OR5AC1P0C628 307 aa9.73□□□□□ -0.85
LIG1-212ENST00000596549 TMBIM6P55061 237 aa9.73□□□□□ -0.85
LIG1-212ENST00000596549 SSBP1Q04837 148 aaKnown RBP9.73□□□□□ -0.85
LIG1-212ENST00000596549 CCDC71LQ8N9Z2 235 aa9.73□□□□□ -0.85
LIG1-212ENST00000596549 PINX1Q96BK5 328 aaKnown RBP9.73□□□□□ -0.85
LIG1-212ENST00000596549 BCL7BQ9BQE9 202 aa9.73□□□□□ -0.85
LIG1-212ENST00000596549 RTBDNQ9BSG5 229 aaPredicted RBP9.73□□□□□ -0.85
LIG1-212ENST00000596549 C20orf24Q9BUV8 137 aa9.73□□□□□ -0.85
LIG1-212ENST00000596549 SLIRPQ9GZT3 109 aaKnown RBP9.73□□□□□ -0.85
LIG1-212ENST00000596549 COPZ2Q9P299 210 aa9.73□□□□□ -0.85
LIG1-212ENST00000596549 SACSQ9NZJ4 4579 aa9.72□□□□□ -0.85
LIG1-212ENST00000596549 C15orf62A8K5M9 175 aa9.72□□□□□ -0.85
LIG1-212ENST00000596549 TSPAN4O14817 238 aa9.72□□□□□ -0.85
LIG1-212ENST00000596549 IL18Q14116 193 aa9.72□□□□□ -0.85
LIG1-212ENST00000596549 TRIM16LQ309B1 348 aa9.72□□□□□ -0.85
LIG1-212ENST00000596549 ODF3L2Q3SX64 289 aa9.72□□□□□ -0.85
LIG1-212ENST00000596549 PVRIGQ6DKI7 326 aa9.72□□□□□ -0.85
LIG1-212ENST00000596549 RBPMS2Q6ZRY4 209 aaKnown RBP9.72□□□□□ -0.85
LIG1-212ENST00000596549 SLC35G3Q8N808 338 aa9.72□□□□□ -0.85
LIG1-212ENST00000596549 ZFAND1Q8TCF1 268 aa9.72□□□□□ -0.85
LIG1-212ENST00000596549 DIRAS2Q96HU8 199 aa9.72□□□□□ -0.85
LIG1-212ENST00000596549 OR10C1Q96KK4 312 aa9.72□□□□□ -0.85
LIG1-212ENST00000596549 SPAG8Q99932 426 aaPredicted RBP9.72□□□□□ -0.85
LIG1-212ENST00000596549 NXF2Q9GZY0 626 aaKnown RBP9.72□□□□□ -0.85
LIG1-212ENST00000596549 UBQLN2Q9UHD9 624 aa9.72□□□□□ -0.85
LIG1-212ENST00000596549 RYR2Q92736 4967 aa9.71□□□□□ -0.85
LIG1-212ENST00000596549 K7EMT4 169 aa9.71□□□□□ -0.86
LIG1-212ENST00000596549 NUPL2O15504 423 aaKnown RBP9.71□□□□□ -0.86
LIG1-212ENST00000596549 AKAIN1P0CW23 69 aa9.71□□□□□ -0.86
LIG1-212ENST00000596549 RNASE2P10153 161 aaKnown RBP9.71□□□□□ -0.86
LIG1-212ENST00000596549 MFAP4P55083 255 aa9.71□□□□□ -0.86
LIG1-212ENST00000596549 MEF2DQ14814 521 aa9.71□□□□□ -0.86
LIG1-212ENST00000596549 Q6ZRM9 215 aa9.71□□□□□ -0.86
LIG1-212ENST00000596549 GLYATL2Q8WU03 294 aa9.71□□□□□ -0.86
LIG1-212ENST00000596549 GGTLC1Q9BX51 225 aa9.71□□□□□ -0.86
LIG1-212ENST00000596549 C6orf62Q9GZU0 229 aaPredicted RBP9.71□□□□□ -0.86
LIG1-212ENST00000596549 TMEM222Q9H0R3 208 aa9.71□□□□□ -0.86
LIG1-212ENST00000596549 NAA60Q9H7X0 242 aa9.71□□□□□ -0.86
LIG1-212ENST00000596549 MRPL36Q9P0J6 103 aaKnown RBP9.71□□□□□ -0.86
LIG1-212ENST00000596549 LYSTQ99698 3801 aa9.7□□□□□ -0.86
LIG1-212ENST00000596549 LOC102724200A0A096LPH7 203 aaPredicted RBP9.7□□□□□ -0.86
LIG1-212ENST00000596549 IGHV3-49A0A0A0MS15 119 aa9.7□□□□□ -0.86
LIG1-212ENST00000596549 IGHV7-4-1A0A0J9YVY3 117 aa9.7□□□□□ -0.86
LIG1-212ENST00000596549 ANKRD20A5PA0PJZ0 165 aa9.7□□□□□ -0.86
LIG1-212ENST00000596549 GSTZ1O43708 216 aaPredicted RBP9.7□□□□□ -0.86
LIG1-212ENST00000596549 CDS2O95674 445 aa9.7□□□□□ -0.86
LIG1-212ENST00000596549 HOXA1P49639 335 aaPredicted RBP9.7□□□□□ -0.86
LIG1-212ENST00000596549 ERHP84090 104 aaKnown RBP9.7□□□□□ -0.86
LIG1-212ENST00000596549 RELQ04864 619 aaPredicted RBP9.7□□□□□ -0.86
LIG1-212ENST00000596549 SURF2Q15527 256 aaPredicted RBP9.7□□□□□ -0.86
LIG1-212ENST00000596549 BSXQ3C1V8 233 aa9.7□□□□□ -0.86
LIG1-212ENST00000596549 ANKRD55Q3KP44 614 aa9.7□□□□□ -0.86
LIG1-212ENST00000596549 AARDQ4LEZ3 155 aa9.7□□□□□ -0.86
LIG1-212ENST00000596549 TMEM230Q96A57 120 aa9.7□□□□□ -0.86
LIG1-212ENST00000596549 RNF2Q99496 336 aa9.7□□□□□ -0.86
LIG1-212ENST00000596549 TXN2Q99757 166 aa9.7□□□□□ -0.86
LIG1-212ENST00000596549 FNDC4Q9H6D8 234 aaPredicted RBP9.7□□□□□ -0.86
LIG1-212ENST00000596549 ZFAND3Q9H8U3 227 aa9.7□□□□□ -0.86
LIG1-212ENST00000596549 SMPXQ9UHP9 88 aa9.7□□□□□ -0.86
LIG1-212ENST00000596549 GPR132Q9UNW8 380 aa9.7□□□□□ -0.86
LIG1-212ENST00000596549 C14orf166Q9Y224 244 aaKnown RBP9.7□□□□□ -0.86
LIG1-212ENST00000596549 CRYM-AS1A6NIL9 109 aa9.69□□□□□ -0.86
LIG1-212ENST00000596549 DISC1C4P0D8 188 aa9.69□□□□□ -0.86
LIG1-212ENST00000596549 CHEK1O14757 476 aa9.69□□□□□ -0.86
LIG1-212ENST00000596549 GNG7O60262 68 aa9.69□□□□□ -0.86
LIG1-212ENST00000596549 B3GALNT1O75752 331 aa9.69□□□□□ -0.86
LIG1-212ENST00000596549 ATG12O94817 140 aa9.69□□□□□ -0.86
LIG1-212ENST00000596549 IFNA17P01571 189 aa9.69□□□□□ -0.86
LIG1-212ENST00000596549 ETV6P41212 452 aa9.69□□□□□ -0.86
LIG1-212ENST00000596549 RPL5P46777 297 aaKnown RBP9.69□□□□□ -0.86
LIG1-212ENST00000596549 OR51S1Q8NGJ8 323 aa9.69□□□□□ -0.86
LIG1-212ENST00000596549 RBPMSQ93062 196 aaKnown RBP9.69□□□□□ -0.86
LIG1-212ENST00000596549 SOSTQ9BQB4 213 aa9.69□□□□□ -0.86
LIG1-212ENST00000596549 PDCD10Q9BUL8 212 aa9.69□□□□□ -0.86
LIG1-212ENST00000596549 PRR13Q9NZ81 148 aa9.69□□□□□ -0.86
LIG1-212ENST00000596549 TENM2Q9NT68 2774 aa9.68□□□□□ -0.86
LIG1-212ENST00000596549 TEX13DA0A0J9YY54 714 aaPredicted RBP9.68□□□□□ -0.86
LIG1-212ENST00000596549 LCE6AA0A183 80 aa9.68□□□□□ -0.86
LIG1-212ENST00000596549 FAM90A2PQ658T7 463 aa9.68□□□□□ -0.86
LIG1-212ENST00000596549 SELENOHQ8IZQ5 122 aaKnown RBP9.68□□□□□ -0.86
LIG1-212ENST00000596549 RNASE11Q8TAA1 199 aaKnown RBP9.68□□□□□ -0.86
LIG1-212ENST00000596549 TRIM63Q969Q1 353 aa9.68□□□□□ -0.86
LIG1-212ENST00000596549 RRNAD1Q96FB5 475 aaKnown RBP9.68□□□□□ -0.86
LIG1-212ENST00000596549 OVOL2Q9BRP0 275 aa9.68□□□□□ -0.86
LIG1-212ENST00000596549 RHPN1-AS1Q9BWJ2 59 aa9.68□□□□□ -0.86
LIG1-212ENST00000596549 RABL2AQ9UBK7 228 aaPredicted RBP9.68□□□□□ -0.86
LIG1-212ENST00000596549 RABL2BQ9UNT1 228 aa9.68□□□□□ -0.86
LIG1-212ENST00000596549 IGHV3OR16-13A0A075B7E8 117 aa9.67□□□□□ -0.86
LIG1-212ENST00000596549 IGHV3-74A0A0B4J1X5 117 aa9.67□□□□□ -0.86
LIG1-212ENST00000596549 A0A1B0GU03 582 aa9.67□□□□□ -0.86
LIG1-212ENST00000596549 OR4C46A6NHA9 309 aa9.67□□□□□ -0.86
LIG1-212ENST00000596549 CORTO00230 105 aa9.67□□□□□ -0.86
LIG1-212ENST00000596549 NOL3O60936 208 aaKnown RBP9.67□□□□□ -0.86
LIG1-212ENST00000596549 YIF1AO95070 293 aa9.67□□□□□ -0.86
LIG1-212ENST00000596549 APOHP02749 345 aaPredicted RBP9.67□□□□□ -0.86
LIG1-212ENST00000596549 TNFSF8P32971 234 aa9.67□□□□□ -0.86
LIG1-212ENST00000596549 SNCAP37840 140 aa9.67□□□□□ -0.86
LIG1-212ENST00000596549 ZNF124Q15973 351 aa9.67□□□□□ -0.86
LIG1-212ENST00000596549 TMEM268Q5VZI3 342 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms