RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 SEC22CQ9BRL7 303 aa11.04□□□□□ -0.64
LIG1-208ENST00000595758 HSPB7Q9UBY9 170 aa11.04□□□□□ -0.64
LIG1-208ENST00000595758 IGHV3-21A0A0B4J1V1 117 aa11.03□□□□□ -0.64
LIG1-208ENST00000595758 G3V4G9 280 aa11.03□□□□□ -0.64
LIG1-208ENST00000595758 K7EIM0 57 aa11.03□□□□□ -0.64
LIG1-208ENST00000595758 BMPR1BO00238 502 aa11.03□□□□□ -0.64
LIG1-208ENST00000595758 OVOL1O14753 267 aa11.03□□□□□ -0.64
LIG1-208ENST00000595758 CLEC3BP05452 202 aa11.03□□□□□ -0.64
LIG1-208ENST00000595758 RNASE2P10153 161 aaKnown RBP11.03□□□□□ -0.64
LIG1-208ENST00000595758 RPEL1Q2QD12 228 aa11.03□□□□□ -0.64
LIG1-208ENST00000595758 SAMD5Q5TGI4 173 aa11.03□□□□□ -0.64
LIG1-208ENST00000595758 PLET1Q6UQ28 207 aa11.03□□□□□ -0.64
LIG1-208ENST00000595758 C1QL4Q86Z23 238 aa11.03□□□□□ -0.64
LIG1-208ENST00000595758 ZNF502Q8TBZ5 544 aa11.03□□□□□ -0.64
LIG1-208ENST00000595758 ZNF431Q8TF32 576 aaPredicted RBP11.03□□□□□ -0.64
LIG1-208ENST00000595758 GPR61Q9BZJ8 451 aa11.03□□□□□ -0.64
LIG1-208ENST00000595758 HIPK2Q9H2X6 1198 aa11.03□□□□□ -0.64
LIG1-208ENST00000595758 RBKSQ9H477 322 aa11.03□□□□□ -0.64
LIG1-208ENST00000595758 PPP5D1E7EU14 171 aa11.02□□□□□ -0.65
LIG1-208ENST00000595758 IL5P05113 134 aa11.02□□□□□ -0.65
LIG1-208ENST00000595758 ARL3P36405 182 aa11.02□□□□□ -0.65
LIG1-208ENST00000595758 HTR2BP41595 481 aa11.02□□□□□ -0.65
LIG1-208ENST00000595758 KLF5Q13887 457 aaPredicted RBP11.02□□□□□ -0.65
LIG1-208ENST00000595758 SCARB1Q8WTV0 552 aa11.02□□□□□ -0.65
LIG1-208ENST00000595758 C21orf62Q9NYP8 219 aa11.02□□□□□ -0.65
LIG1-208ENST00000595758 SEC14L6B5MCN3 397 aa11.01□□□□□ -0.65
LIG1-208ENST00000595758 FAM90A26D6RGX4 464 aa11.01□□□□□ -0.65
LIG1-208ENST00000595758 INMT-MINDY4F8WBC2 141 aa11.01□□□□□ -0.65
LIG1-208ENST00000595758 I3L2K1 104 aa11.01□□□□□ -0.65
LIG1-208ENST00000595758 GGCTO75223 188 aaKnown RBP11.01□□□□□ -0.65
LIG1-208ENST00000595758 MT-CO2P00403 227 aa11.01□□□□□ -0.65
LIG1-208ENST00000595758 GPR183P32249 361 aa11.01□□□□□ -0.65
LIG1-208ENST00000595758 SYNJ2BPP57105 145 aa11.01□□□□□ -0.65
LIG1-208ENST00000595758 TATDN3Q17R31 274 aa11.01□□□□□ -0.65
LIG1-208ENST00000595758 BSXQ3C1V8 233 aa11.01□□□□□ -0.65
LIG1-208ENST00000595758 PVRIGQ6DKI7 326 aa11.01□□□□□ -0.65
LIG1-208ENST00000595758 C12orf45Q8N5I9 185 aaPredicted RBP11.01□□□□□ -0.65
LIG1-208ENST00000595758 UXS1Q8NBZ7 420 aa11.01□□□□□ -0.65
LIG1-208ENST00000595758 DTD1Q8TEA8 209 aa11.01□□□□□ -0.65
LIG1-208ENST00000595758 PINX1Q96BK5 328 aaKnown RBP11.01□□□□□ -0.65
LIG1-208ENST00000595758 MPTX1A8MV57 137 aa11□□□□□ -0.65
LIG1-208ENST00000595758 CORTO00230 105 aa11□□□□□ -0.65
LIG1-208ENST00000595758 MED6O75586 246 aa11□□□□□ -0.65
LIG1-208ENST00000595758 OR2C1O95371 312 aa11□□□□□ -0.65
LIG1-208ENST00000595758 MFAP4P55083 255 aa11□□□□□ -0.65
LIG1-208ENST00000595758 C9orf66Q5T8R8 295 aa11□□□□□ -0.65
LIG1-208ENST00000595758 C11orf87Q6NUJ2 197 aa11□□□□□ -0.65
LIG1-208ENST00000595758 SLC24A4Q8NFF2 622 aa11□□□□□ -0.65
LIG1-208ENST00000595758 ATP6V0BQ99437 205 aa11□□□□□ -0.65
LIG1-208ENST00000595758 MARVELD1Q9BSK0 173 aa11□□□□□ -0.65
LIG1-208ENST00000595758 GPN1Q9HCN4 374 aaPredicted RBP11□□□□□ -0.65
LIG1-208ENST00000595758 U3KQ87 197 aa11□□□□□ -0.65
LIG1-208ENST00000595758 OR2T8A6NH00 312 aa10.99□□□□□ -0.65
LIG1-208ENST00000595758 PRAF2O60831 178 aa10.99□□□□□ -0.65
LIG1-208ENST00000595758 IFNA10P01566 189 aa10.99□□□□□ -0.65
LIG1-208ENST00000595758 IGHV3-48P01763 117 aa10.99□□□□□ -0.65
LIG1-208ENST00000595758 NPY1RP25929 384 aa10.99□□□□□ -0.65
LIG1-208ENST00000595758 IAH1Q2TAA2 248 aaPredicted RBP10.99□□□□□ -0.65
LIG1-208ENST00000595758 BEAN1Q3B7T3 259 aa10.99□□□□□ -0.65
LIG1-208ENST00000595758 C2orf83Q53S99 150 aa10.99□□□□□ -0.65
LIG1-208ENST00000595758 Q56UQ5 140 aa10.99□□□□□ -0.65
LIG1-208ENST00000595758 KPRPQ5T749 579 aaPredicted RBP10.99□□□□□ -0.65
LIG1-208ENST00000595758 NOXA1Q86UR1 476 aa10.99□□□□□ -0.65
LIG1-208ENST00000595758 UBAC2Q8NBM4 344 aa10.99□□□□□ -0.65
LIG1-208ENST00000595758 ELOVL1Q9BW60 279 aa10.99□□□□□ -0.65
LIG1-208ENST00000595758 MAGT1Q9H0U3 335 aa10.99□□□□□ -0.65
LIG1-208ENST00000595758 ZC4H2Q9NQZ6 224 aa10.99□□□□□ -0.65
LIG1-208ENST00000595758 GAR1Q9NY12 217 aaKnown RBP10.99□□□□□ -0.65
LIG1-208ENST00000595758 TGOLN2O43493 480 aa10.98□□□□□ -0.65
LIG1-208ENST00000595758 SYNGR2O43760 224 aa10.98□□□□□ -0.65
LIG1-208ENST00000595758 SPNP16150 400 aa10.98□□□□□ -0.65
LIG1-208ENST00000595758 ATP5IP56385 69 aaPredicted RBP10.98□□□□□ -0.65
LIG1-208ENST00000595758 FAM106AQ4KMX7 169 aa10.98□□□□□ -0.65
LIG1-208ENST00000595758 ACSM6Q6P461 480 aa10.98□□□□□ -0.65
LIG1-208ENST00000595758 SPSB3Q6PJ21 355 aa10.98□□□□□ -0.65
LIG1-208ENST00000595758 GPHB5Q86YW7 130 aa10.98□□□□□ -0.65
LIG1-208ENST00000595758 OR9G4Q8NGQ1 327 aa10.98□□□□□ -0.65
LIG1-208ENST00000595758 RNASEH2CQ8TDP1 164 aaKnown RBP10.98□□□□□ -0.65
LIG1-208ENST00000595758 TMEM170AQ8WVE7 144 aa10.98□□□□□ -0.65
LIG1-208ENST00000595758 BSCL2Q96G97 398 aaPredicted RBP10.98□□□□□ -0.65
LIG1-208ENST00000595758 OR10C1Q96KK4 312 aa10.98□□□□□ -0.65
LIG1-208ENST00000595758 CIB3Q96Q77 187 aaPredicted RBP10.98□□□□□ -0.65
LIG1-208ENST00000595758 OR4C12Q96R67 309 aa10.98□□□□□ -0.65
LIG1-208ENST00000595758 TXN2Q99757 166 aa10.98□□□□□ -0.65
LIG1-208ENST00000595758 PALMDQ9NP74 551 aa10.98□□□□□ -0.65
LIG1-208ENST00000595758 GSKIPQ9P0R6 139 aa10.98□□□□□ -0.65
LIG1-208ENST00000595758 SNRPGP15A8MWD9 76 aa10.97□□□□□ -0.65
LIG1-208ENST00000595758 FAM25EA8MYX2 175 aa10.97□□□□□ -0.65
LIG1-208ENST00000595758 F8W735 103 aaPredicted RBP10.97□□□□□ -0.65
LIG1-208ENST00000595758 CCSO14618 274 aa10.97□□□□□ -0.65
LIG1-208ENST00000595758 WIPF1O43516 503 aa10.97□□□□□ -0.65
LIG1-208ENST00000595758 SAP30O75446 220 aa10.97□□□□□ -0.65
LIG1-208ENST00000595758 IAPPP10997 89 aa10.97□□□□□ -0.65
LIG1-208ENST00000595758 FCGR2BP31994 310 aaPredicted RBP10.97□□□□□ -0.65
LIG1-208ENST00000595758 OPRK1P41145 380 aa10.97□□□□□ -0.65
LIG1-208ENST00000595758 NKX2-1P43699 371 aaPredicted RBP10.97□□□□□ -0.65
LIG1-208ENST00000595758 NPBWR1P48145 328 aa10.97□□□□□ -0.65
LIG1-208ENST00000595758 INSL3P51460 131 aa10.97□□□□□ -0.65
LIG1-208ENST00000595758 ID3Q02535 119 aa10.97□□□□□ -0.65
LIG1-208ENST00000595758 ZBTB8BQ8NAP8 495 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms