RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 PINX1Q96BK5 328 aaKnown RBP17.52■□□□□ 0.4
LSM4-204ENST00000594828 IGHV3-48P01763 117 aa17.51■□□□□ 0.39
LSM4-204ENST00000594828 P0C879 139 aa17.51■□□□□ 0.39
LSM4-204ENST00000594828 CLVS1Q8IUQ0 354 aaPredicted RBP17.51■□□□□ 0.39
LSM4-204ENST00000594828 MARCH1Q8TCQ1 289 aa17.51■□□□□ 0.39
LSM4-204ENST00000594828 ST8SIA3O43173 380 aa17.5■□□□□ 0.39
LSM4-204ENST00000594828 YIF1AO95070 293 aa17.5■□□□□ 0.39
LSM4-204ENST00000594828 IFNA17P01571 189 aa17.5■□□□□ 0.39
LSM4-204ENST00000594828 CTSDP07339 412 aaPredicted RBP17.5■□□□□ 0.39
LSM4-204ENST00000594828 SNCAP37840 140 aa17.5■□□□□ 0.39
LSM4-204ENST00000594828 MEF2DQ14814 521 aa17.5■□□□□ 0.39
LSM4-204ENST00000594828 SLC35G3Q8N808 338 aa17.5■□□□□ 0.39
LSM4-204ENST00000594828 IL17DQ8TAD2 202 aa17.5■□□□□ 0.39
LSM4-204ENST00000594828 PDCD10Q9BUL8 212 aa17.5■□□□□ 0.39
LSM4-204ENST00000594828 SMPXQ9UHP9 88 aa17.5■□□□□ 0.39
LSM4-204ENST00000594828 GNG7O60262 68 aa17.49■□□□□ 0.39
LSM4-204ENST00000594828 B3GALNT1O75752 331 aa17.49■□□□□ 0.39
LSM4-204ENST00000594828 UCP1P25874 307 aa17.49■□□□□ 0.39
LSM4-204ENST00000594828 RAB2BQ8WUD1 216 aa17.49■□□□□ 0.39
LSM4-204ENST00000594828 RRNAD1Q96FB5 475 aaKnown RBP17.49■□□□□ 0.39
LSM4-204ENST00000594828 DIRAS2Q96HU8 199 aa17.49■□□□□ 0.39
LSM4-204ENST00000594828 ZNF414Q96IQ9 312 aa17.49■□□□□ 0.39
LSM4-204ENST00000594828 NXF2Q9GZY0 626 aaKnown RBP17.49■□□□□ 0.39
LSM4-204ENST00000594828 UBQLN2Q9UHD9 624 aa17.49■□□□□ 0.39
LSM4-204ENST00000594828 INS-IGF2F8WCM5 200 aa17.48■□□□□ 0.39
LSM4-204ENST00000594828 ETV6P41212 452 aa17.48■□□□□ 0.39
LSM4-204ENST00000594828 FAAP20Q6NZ36 180 aa17.48■□□□□ 0.39
LSM4-204ENST00000594828 RNASE11Q8TAA1 199 aaKnown RBP17.48■□□□□ 0.39
LSM4-204ENST00000594828 SMIM4Q8WVI0 70 aa17.48■□□□□ 0.39
LSM4-204ENST00000594828 OR10C1Q96KK4 312 aa17.48■□□□□ 0.39
LSM4-204ENST00000594828 C14orf166Q9Y224 244 aaKnown RBP17.48■□□□□ 0.39
LSM4-204ENST00000594828 IGHV7-4-1A0A0J9YVY3 117 aa17.47■□□□□ 0.39
LSM4-204ENST00000594828 LCE6AA0A183 80 aa17.47■□□□□ 0.39
LSM4-204ENST00000594828 OR4C46A6NHA9 309 aa17.47■□□□□ 0.39
LSM4-204ENST00000594828 DISC1C4P0D8 188 aa17.47■□□□□ 0.39
LSM4-204ENST00000594828 SUB1P53999 127 aaKnown RBP eCLIP17.47■□□□□ 0.39
LSM4-204ENST00000594828 TMBIM6P55061 237 aa17.47■□□□□ 0.39
LSM4-204ENST00000594828 IL18Q14116 193 aa17.47■□□□□ 0.39
LSM4-204ENST00000594828 TMEM116Q8NCL8 245 aa17.47■□□□□ 0.39
LSM4-204ENST00000594828 DUSP18Q8NEJ0 188 aa17.47■□□□□ 0.39
LSM4-204ENST00000594828 DYNC2LI1Q8TCX1 351 aa17.47■□□□□ 0.39
LSM4-204ENST00000594828 RHPN1-AS1Q9BWJ2 59 aa17.47■□□□□ 0.39
LSM4-204ENST00000594828 RABL2AQ9UBK7 228 aaPredicted RBP17.47■□□□□ 0.39
LSM4-204ENST00000594828 RABL2BQ9UNT1 228 aa17.47■□□□□ 0.39
LSM4-204ENST00000594828 TRAV14DV4A0A0A6YYC5 116 aa17.46■□□□□ 0.39
LSM4-204ENST00000594828 CHEK1O14757 476 aa17.46■□□□□ 0.39
LSM4-204ENST00000594828 CTDSPLO15194 276 aa17.46■□□□□ 0.39
LSM4-204ENST00000594828 NPBWR1P48145 328 aa17.46■□□□□ 0.39
LSM4-204ENST00000594828 RNF2Q99496 336 aa17.46■□□□□ 0.39
LSM4-204ENST00000594828 BCL7BQ9BQE9 202 aa17.46■□□□□ 0.39
LSM4-204ENST00000594828 OVOL2Q9BRP0 275 aa17.46■□□□□ 0.39
LSM4-204ENST00000594828 RTBDNQ9BSG5 229 aaPredicted RBP17.46■□□□□ 0.39
LSM4-204ENST00000594828 TMEM222Q9H0R3 208 aa17.46■□□□□ 0.39
LSM4-204ENST00000594828 ENY2Q9NPA8 101 aa17.46■□□□□ 0.39
LSM4-204ENST00000594828 CCDC59Q9P031 241 aaKnown RBP17.46■□□□□ 0.39
LSM4-204ENST00000594828 IGHV3-49A0A0A0MS15 119 aa17.45■□□□□ 0.38
LSM4-204ENST00000594828 A0A0G2JRQ6 117 aa17.45■□□□□ 0.38
LSM4-204ENST00000594828 TEX13DA0A0J9YY54 714 aaPredicted RBP17.45■□□□□ 0.38
LSM4-204ENST00000594828 OR5AC1P0C628 307 aa17.45■□□□□ 0.38
LSM4-204ENST00000594828 AKAIN1P0CW23 69 aa17.45■□□□□ 0.38
LSM4-204ENST00000594828 HOXA1P49639 335 aaPredicted RBP17.45■□□□□ 0.38
LSM4-204ENST00000594828 SURF2Q15527 256 aaPredicted RBP17.45■□□□□ 0.38
LSM4-204ENST00000594828 TENM2Q9NT68 2774 aa17.44■□□□□ 0.38
LSM4-204ENST00000594828 DYNC2H1Q8NCM8 4307 aaKnown RBP17.44■□□□□ 0.38
LSM4-204ENST00000594828 CORTO00230 105 aa17.44■□□□□ 0.38
LSM4-204ENST00000594828 CDS2O95674 445 aa17.44■□□□□ 0.38
LSM4-204ENST00000594828 APOC4P55056 127 aa17.44■□□□□ 0.38
LSM4-204ENST00000594828 ODF3L2Q3SX64 289 aa17.44■□□□□ 0.38
LSM4-204ENST00000594828 OR4C16Q8NGL9 310 aa17.44■□□□□ 0.38
LSM4-204ENST00000594828 GLYATL2Q8WU03 294 aa17.44■□□□□ 0.38
LSM4-204ENST00000594828 NAA60Q9H7X0 242 aa17.44■□□□□ 0.38
LSM4-204ENST00000594828 RNASE2P10153 161 aaKnown RBP17.43■□□□□ 0.38
LSM4-204ENST00000594828 PVRIGQ6DKI7 326 aa17.43■□□□□ 0.38
LSM4-204ENST00000594828 TOMM20LQ6UXN7 152 aa17.43■□□□□ 0.38
LSM4-204ENST00000594828 Q6ZRM9 215 aa17.43■□□□□ 0.38
LSM4-204ENST00000594828 FAM219AQ8IW50 185 aa17.43■□□□□ 0.38
LSM4-204ENST00000594828 GINS3Q9BRX5 216 aa17.43■□□□□ 0.38
LSM4-204ENST00000594828 C6orf62Q9GZU0 229 aaPredicted RBP17.43■□□□□ 0.38
LSM4-204ENST00000594828 GPR132Q9UNW8 380 aa17.43■□□□□ 0.38
LSM4-204ENST00000594828 CSMD3Q7Z407 3707 aa17.43■□□□□ 0.38
LSM4-204ENST00000594828 STARD9Q9P2P6 4700 aa17.42■□□□□ 0.38
LSM4-204ENST00000594828 IGHV3OR16-13A0A075B7E8 117 aa17.42■□□□□ 0.38
LSM4-204ENST00000594828 IGHV3-74A0A0B4J1X5 117 aa17.42■□□□□ 0.38
LSM4-204ENST00000594828 TMEM50AO95807 157 aa17.42■□□□□ 0.38
LSM4-204ENST00000594828 DHODHQ02127 395 aa17.42■□□□□ 0.38
LSM4-204ENST00000594828 PRRT1Q99946 306 aa17.42■□□□□ 0.38
LSM4-204ENST00000594828 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.42■□□□□ 0.38
LSM4-204ENST00000594828 NOL3O60936 208 aaKnown RBP17.41■□□□□ 0.38
LSM4-204ENST00000594828 RPL5P46777 297 aaKnown RBP17.41■□□□□ 0.38
LSM4-204ENST00000594828 SPCS3P61009 180 aa17.41■□□□□ 0.38
LSM4-204ENST00000594828 ZNF600Q6ZNG1 722 aa17.41■□□□□ 0.38
LSM4-204ENST00000594828 Q6ZWC4 215 aa17.41■□□□□ 0.38
LSM4-204ENST00000594828 SELENOHQ8IZQ5 122 aaKnown RBP17.41■□□□□ 0.38
LSM4-204ENST00000594828 OR51S1Q8NGJ8 323 aa17.41■□□□□ 0.38
LSM4-204ENST00000594828 LHFPL5Q8TAF8 219 aa17.41■□□□□ 0.38
LSM4-204ENST00000594828 RBPMSQ93062 196 aaKnown RBP17.41■□□□□ 0.38
LSM4-204ENST00000594828 RSL24D1Q9UHA3 163 aaKnown RBP17.41■□□□□ 0.38
LSM4-204ENST00000594828 IGKV3-7A0A075B6H7 116 aa17.4■□□□□ 0.38
LSM4-204ENST00000594828 CRYM-AS1A6NIL9 109 aa17.4■□□□□ 0.38
LSM4-204ENST00000594828 UBE2CO00762 179 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 163.8 ms