RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 ZNF503Q96F45 646 aa13.45□□□□□ -0.26
LIG1-206ENST00000594067 RNF2Q99496 336 aa13.45□□□□□ -0.26
LIG1-206ENST00000594067 HELTA6NFD8 242 aa13.45□□□□□ -0.26
LIG1-206ENST00000594067 DIRC3C9JPN6 131 aa13.45□□□□□ -0.26
LIG1-206ENST00000594067 OR7C2O60412 319 aa13.45□□□□□ -0.26
LIG1-206ENST00000594067 OR10J4P0C629 311 aa13.45□□□□□ -0.26
LIG1-206ENST00000594067 KIAA1644Q3SXP7 199 aa13.45□□□□□ -0.26
LIG1-206ENST00000594067 PQLC2Q6ZP29 291 aa13.45□□□□□ -0.26
LIG1-206ENST00000594067 ZADH2Q8N4Q0 377 aa13.45□□□□□ -0.26
LIG1-206ENST00000594067 OR4B1Q8NGF8 309 aa13.45□□□□□ -0.26
LIG1-206ENST00000594067 NRN1Q9NPD7 142 aa13.45□□□□□ -0.26
LIG1-206ENST00000594067 TFPI2P48307 235 aa13.44□□□□□ -0.26
LIG1-206ENST00000594067 GNG4P50150 75 aa13.44□□□□□ -0.26
LIG1-206ENST00000594067 TMEM136Q6ZRR5 245 aa13.44□□□□□ -0.26
LIG1-206ENST00000594067 DOLPP1Q86YN1 238 aa13.44□□□□□ -0.26
LIG1-206ENST00000594067 OR10W1Q8NGF6 305 aa13.44□□□□□ -0.26
LIG1-206ENST00000594067 RCHY1Q96PM5 261 aa13.44□□□□□ -0.26
LIG1-206ENST00000594067 ZNF586Q9NXT0 402 aa13.44□□□□□ -0.26
LIG1-206ENST00000594067 SLC25A10Q9UBX3 287 aaPredicted RBP13.44□□□□□ -0.26
LIG1-206ENST00000594067 ZNF788Q6ZQV5 615 aa13.44□□□□□ -0.26
LIG1-206ENST00000594067 OR9G1Q8NH87 305 aa13.44□□□□□ -0.26
LIG1-206ENST00000594067 RNASE7Q9H1E1 156 aaKnown RBP13.44□□□□□ -0.26
LIG1-206ENST00000594067 TMEM167BQ9NRX6 74 aa13.44□□□□□ -0.26
LIG1-206ENST00000594067 IL19Q9UHD0 177 aa13.44□□□□□ -0.26
LIG1-206ENST00000594067 TNCP24821 2201 aa13.44□□□□□ -0.26
LIG1-206ENST00000594067 FAM27E3Q08E93 113 aa13.43□□□□□ -0.26
LIG1-206ENST00000594067 RTL8BQ17RB0 113 aa13.43□□□□□ -0.26
LIG1-206ENST00000594067 OR10J3Q5JRS4 329 aa13.43□□□□□ -0.26
LIG1-206ENST00000594067 SLC25A48Q6ZT89 311 aaKnown RBP13.43□□□□□ -0.26
LIG1-206ENST00000594067 TECRQ9NZ01 308 aaKnown RBP13.43□□□□□ -0.26
LIG1-206ENST00000594067 RPUSD1Q9UJJ7 312 aaKnown RBP13.43□□□□□ -0.26
LIG1-206ENST00000594067 A0A1W2PS18 150 aa13.43□□□□□ -0.26
LIG1-206ENST00000594067 FNDC10F2Z333 226 aa13.43□□□□□ -0.26
LIG1-206ENST00000594067 MT-ND6P03923 174 aa13.43□□□□□ -0.26
LIG1-206ENST00000594067 SAA1P0DJI8 122 aaPredicted RBP13.43□□□□□ -0.26
LIG1-206ENST00000594067 AMTP48728 403 aa13.43□□□□□ -0.26
LIG1-206ENST00000594067 SELENOVP59797 346 aa13.43□□□□□ -0.26
LIG1-206ENST00000594067 SLC35B1P78383 322 aa13.43□□□□□ -0.26
LIG1-206ENST00000594067 FXYD3Q14802 87 aa13.43□□□□□ -0.26
LIG1-206ENST00000594067 ZNF257Q9Y2Q1 563 aa13.43□□□□□ -0.26
LIG1-206ENST00000594067 DSCAML1Q8TD84 2053 aa13.42□□□□□ -0.26
LIG1-206ENST00000594067 MMDQ15546 238 aa13.42□□□□□ -0.26
LIG1-206ENST00000594067 COL5A1-AS1Q5SY13 56 aa13.42□□□□□ -0.26
LIG1-206ENST00000594067 WDR73Q6P4I2 378 aa13.42□□□□□ -0.26
LIG1-206ENST00000594067 YLPM1P49750 1951 aaKnown RBP13.42□□□□□ -0.26
LIG1-206ENST00000594067 RNASE2P10153 161 aaKnown RBP13.42□□□□□ -0.26
LIG1-206ENST00000594067 SUMO1P63165 101 aaKnown RBP13.42□□□□□ -0.26
LIG1-206ENST00000594067 OSTCQ9NRP0 149 aa13.42□□□□□ -0.26
LIG1-206ENST00000594067 ARL2-SNX15V9GYD0 113 aa13.42□□□□□ -0.26
LIG1-206ENST00000594067 RAI1Q7Z5J4 1906 aaPredicted RBP13.42□□□□□ -0.26
LIG1-206ENST00000594067 GGTLC3B5MD39 225 aa13.41□□□□□ -0.26
LIG1-206ENST00000594067 SPATA45Q537H7 98 aa13.41□□□□□ -0.26
LIG1-206ENST00000594067 C2orf83Q53S99 150 aa13.41□□□□□ -0.26
LIG1-206ENST00000594067 DMRTA1Q5VZB9 504 aa13.41□□□□□ -0.26
LIG1-206ENST00000594067 KCNS1Q96KK3 526 aa13.41□□□□□ -0.26
LIG1-206ENST00000594067 EP300Q09472 2414 aaPredicted RBP13.41□□□□□ -0.26
LIG1-206ENST00000594067 SMG1Q96Q15 3661 aaKnown RBP13.41□□□□□ -0.26
LIG1-206ENST00000594067 ZNF253O75346 499 aa13.41□□□□□ -0.26
LIG1-206ENST00000594067 TCL1AP56279 114 aa13.41□□□□□ -0.26
LIG1-206ENST00000594067 CCL8P80075 99 aa13.41□□□□□ -0.26
LIG1-206ENST00000594067 C1orf185Q5T7R7 199 aa13.41□□□□□ -0.26
LIG1-206ENST00000594067 SLC35E1Q96K37 410 aa13.41□□□□□ -0.26
LIG1-206ENST00000594067 MRPL20Q9BYC9 149 aaKnown RBP13.41□□□□□ -0.26
LIG1-206ENST00000594067 LAMA5O15230 3695 aa13.41□□□□□ -0.26
LIG1-206ENST00000594067 CEACAM4O75871 244 aa13.4□□□□□ -0.26
LIG1-206ENST00000594067 RPL19P84098 196 aaKnown RBP13.4□□□□□ -0.26
LIG1-206ENST00000594067 OR2T6Q8NHC8 308 aa13.4□□□□□ -0.26
LIG1-206ENST00000594067 ZFP30Q9Y2G7 519 aa13.4□□□□□ -0.26
LIG1-206ENST00000594067 PLCE1Q9P212 2302 aa13.4□□□□□ -0.26
LIG1-206ENST00000594067 TANC2Q9HCD6 1990 aa13.4□□□□□ -0.26
LIG1-206ENST00000594067 TRAV5A0A0B4J249 113 aa13.4□□□□□ -0.26
LIG1-206ENST00000594067 BMPR1BO00238 502 aa13.4□□□□□ -0.26
LIG1-206ENST00000594067 IGLV2-8P01709 118 aa13.4□□□□□ -0.26
LIG1-206ENST00000594067 OR5G3P0C626 314 aa13.4□□□□□ -0.26
LIG1-206ENST00000594067 PMCHP20382 165 aa13.4□□□□□ -0.26
LIG1-206ENST00000594067 TNFSF4P23510 183 aa13.4□□□□□ -0.26
LIG1-206ENST00000594067 CHRNB4P30926 498 aa13.4□□□□□ -0.26
LIG1-206ENST00000594067 REG1BP48304 166 aa13.4□□□□□ -0.26
LIG1-206ENST00000594067 LINC00574Q9H8X3 128 aa13.4□□□□□ -0.26
LIG1-206ENST00000594067 BET1LQ9NYM9 111 aa13.4□□□□□ -0.26
LIG1-206ENST00000594067 PPIAL4AQ9Y536 164 aa13.4□□□□□ -0.26
LIG1-206ENST00000594067 CACNA1HO95180 2353 aa13.4□□□□□ -0.27
LIG1-206ENST00000594067 hADV38S2A0JD32 116 aa13.39□□□□□ -0.27
LIG1-206ENST00000594067 ISLRO14498 428 aa13.39□□□□□ -0.27
LIG1-206ENST00000594067 TM4SF5O14894 197 aa13.39□□□□□ -0.27
LIG1-206ENST00000594067 ZNF324O75467 553 aaPredicted RBP13.39□□□□□ -0.27
LIG1-206ENST00000594067 IGLC2P0DOY2 106 aa13.39□□□□□ -0.27
LIG1-206ENST00000594067 IGLC3P0DOY3 106 aa13.39□□□□□ -0.27
LIG1-206ENST00000594067 SRIP30626 198 aa13.39□□□□□ -0.27
LIG1-206ENST00000594067 TIGITQ495A1 244 aa13.39□□□□□ -0.27
LIG1-206ENST00000594067 COX19Q49B96 90 aa13.39□□□□□ -0.27
LIG1-206ENST00000594067 MORN5Q5VZ52 161 aa13.39□□□□□ -0.27
LIG1-206ENST00000594067 NIT1Q86X76 327 aa13.39□□□□□ -0.27
LIG1-206ENST00000594067 ZCCHC24Q8N2G6 241 aaKnown RBP13.39□□□□□ -0.27
LIG1-206ENST00000594067 HARBI1Q96MB7 349 aa13.39□□□□□ -0.27
LIG1-206ENST00000594067 MGST1P10620 155 aaKnown RBP13.39□□□□□ -0.27
LIG1-206ENST00000594067 CCL3L1P16619 93 aa13.39□□□□□ -0.27
LIG1-206ENST00000594067 CD40P25942 277 aa13.39□□□□□ -0.27
LIG1-206ENST00000594067 PRRX1P54821 245 aa13.39□□□□□ -0.27
LIG1-206ENST00000594067 TAS2R45P59539 299 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms