RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 AADACP22760 399 aa15.6■□□□□ 0.09
LSM4-203ENST00000593829 S100A2P29034 98 aa15.6■□□□□ 0.09
LSM4-203ENST00000593829 CCL20P78556 96 aa15.6■□□□□ 0.09
LSM4-203ENST00000593829 ZNF600Q6ZNG1 722 aa15.6■□□□□ 0.09
LSM4-203ENST00000593829 ZNF747Q9BV97 191 aa15.6■□□□□ 0.09
LSM4-203ENST00000593829 GAR1Q9NY12 217 aaKnown RBP15.6■□□□□ 0.09
LSM4-203ENST00000593829 TRAV1-1A0A0B4J248 108 aa15.59■□□□□ 0.09
LSM4-203ENST00000593829 PROP1O75360 226 aa15.59■□□□□ 0.09
LSM4-203ENST00000593829 SCAF4O95104 1147 aaKnown RBP15.59■□□□□ 0.09
LSM4-203ENST00000593829 AMY1AP04745 511 aa15.59■□□□□ 0.09
LSM4-203ENST00000593829 TAGLN2P37802 199 aaKnown RBP15.59■□□□□ 0.09
LSM4-203ENST00000593829 UBE2KP61086 200 aa15.59■□□□□ 0.09
LSM4-203ENST00000593829 ICAM4Q14773 271 aa15.59■□□□□ 0.09
LSM4-203ENST00000593829 KHDC3LQ587J8 217 aa15.59■□□□□ 0.09
LSM4-203ENST00000593829 PYY3Q5JQD4 70 aa15.59■□□□□ 0.09
LSM4-203ENST00000593829 DOK5Q9P104 306 aa15.59■□□□□ 0.09
LSM4-203ENST00000593829 PROK1P58294 105 aa15.58■□□□□ 0.09
LSM4-203ENST00000593829 ARSJQ5FYB0 599 aaPredicted RBP15.58■□□□□ 0.09
LSM4-203ENST00000593829 NCBP2LA6PVI3 153 aaKnown RBP15.58■□□□□ 0.08
LSM4-203ENST00000593829 HAX1O00165 279 aa15.58■□□□□ 0.08
LSM4-203ENST00000593829 MC5RP33032 325 aa15.58■□□□□ 0.08
LSM4-203ENST00000593829 ID3Q02535 119 aa15.58■□□□□ 0.08
LSM4-203ENST00000593829 Q6ZS46 218 aa15.58■□□□□ 0.08
LSM4-203ENST00000593829 ZNF429Q86V71 674 aa15.58■□□□□ 0.08
LSM4-203ENST00000593829 Q8WTZ3 238 aa15.58■□□□□ 0.08
LSM4-203ENST00000593829 WFDC12Q8WWY7 111 aa15.58■□□□□ 0.08
LSM4-203ENST00000593829 IL22RA2Q969J5 263 aa15.58■□□□□ 0.08
LSM4-203ENST00000593829 M0R1X1 148 aa15.57■□□□□ 0.08
LSM4-203ENST00000593829 TUSC2O75896 110 aa15.57■□□□□ 0.08
LSM4-203ENST00000593829 YIF1AO95070 293 aa15.57■□□□□ 0.08
LSM4-203ENST00000593829 DLK1P80370 383 aa15.57■□□□□ 0.08
LSM4-203ENST00000593829 SELENOHQ8IZQ5 122 aaKnown RBP15.57■□□□□ 0.08
LSM4-203ENST00000593829 C5orf56Q8N8D9 126 aa15.57■□□□□ 0.08
LSM4-203ENST00000593829 OR5AN1Q8NGI8 311 aa15.57■□□□□ 0.08
LSM4-203ENST00000593829 TMEM242Q9NWH2 141 aa15.57■□□□□ 0.08
LSM4-203ENST00000593829 PIGBOS1A0A0B4J2F0 54 aa15.56■□□□□ 0.08
LSM4-203ENST00000593829 H0YJW9 148 aa15.56■□□□□ 0.08
LSM4-203ENST00000593829 VAMP2P63027 116 aa15.56■□□□□ 0.08
LSM4-203ENST00000593829 NIPSNAP3BQ9BS92 247 aa15.56■□□□□ 0.08
LSM4-203ENST00000593829 WSB1Q9Y6I7 421 aa15.56■□□□□ 0.08
LSM4-203ENST00000593829 CXCL1P09341 107 aa15.56■□□□□ 0.08
LSM4-203ENST00000593829 GNRHRP30968 328 aa15.56■□□□□ 0.08
LSM4-203ENST00000593829 NDUFA6P56556 154 aa15.56■□□□□ 0.08
LSM4-203ENST00000593829 HAGHQ16775 308 aa15.56■□□□□ 0.08
LSM4-203ENST00000593829 NMSQ5H8A3 153 aa15.56■□□□□ 0.08
LSM4-203ENST00000593829 SHISA2Q6UWI4 295 aa15.56■□□□□ 0.08
LSM4-203ENST00000593829 ZNF695Q8IW36 515 aa15.56■□□□□ 0.08
LSM4-203ENST00000593829 ZNF383Q8NA42 475 aa15.56■□□□□ 0.08
LSM4-203ENST00000593829 SERTAD4Q9NUC0 356 aa15.56■□□□□ 0.08
LSM4-203ENST00000593829 WASHC3Q9Y3C0 194 aa15.56■□□□□ 0.08
LSM4-203ENST00000593829 SH2D7A6NKC9 451 aaPredicted RBP15.55■□□□□ 0.08
LSM4-203ENST00000593829 UCP1P25874 307 aa15.55■□□□□ 0.08
LSM4-203ENST00000593829 RND2P52198 227 aa15.55■□□□□ 0.08
LSM4-203ENST00000593829 PNRC1Q12796 327 aaPredicted RBP15.55■□□□□ 0.08
LSM4-203ENST00000593829 ZNF674Q2M3X9 581 aa15.55■□□□□ 0.08
LSM4-203ENST00000593829 C9orf152Q5JTZ5 239 aa15.55■□□□□ 0.08
LSM4-203ENST00000593829 ZNF645Q8N7E2 425 aa15.55■□□□□ 0.08
LSM4-203ENST00000593829 OR5C1Q8NGR4 320 aa15.55■□□□□ 0.08
LSM4-203ENST00000593829 C5orf30Q96GV9 206 aa15.55■□□□□ 0.08
LSM4-203ENST00000593829 IGKV1D-13A0A0B4J2D9 117 aa15.55■□□□□ 0.08
LSM4-203ENST00000593829 IGKV1-13P0DP09 117 aa15.55■□□□□ 0.08
LSM4-203ENST00000593829 HIST1H1BP16401 226 aaKnown RBP15.55■□□□□ 0.08
LSM4-203ENST00000593829 VDAC2P45880 294 aaPredicted RBP15.55■□□□□ 0.08
LSM4-203ENST00000593829 LINC00205P59089 165 aa15.55■□□□□ 0.08
LSM4-203ENST00000593829 TAS2R30P59541 319 aa15.55■□□□□ 0.08
LSM4-203ENST00000593829 AKR1C8PQ5T2L2 129 aa15.55■□□□□ 0.08
LSM4-203ENST00000593829 TBC1D26Q86UD7 250 aa15.55■□□□□ 0.08
LSM4-203ENST00000593829 Q8N9W7 124 aa15.55■□□□□ 0.08
LSM4-203ENST00000593829 DNHD1Q96M86 4753 aa15.54■□□□□ 0.08
LSM4-203ENST00000593829 LOC102723971A0A1B0GUV8 181 aa15.54■□□□□ 0.08
LSM4-203ENST00000593829 ZNF727A8MUV8 499 aa15.54■□□□□ 0.08
LSM4-203ENST00000593829 HIST1H2BKO60814 126 aa15.54■□□□□ 0.08
LSM4-203ENST00000593829 APOA2P02652 100 aa15.54■□□□□ 0.08
LSM4-203ENST00000593829 HIST1H2BJP06899 126 aa15.54■□□□□ 0.08
LSM4-203ENST00000593829 VDAC1P21796 283 aa15.54■□□□□ 0.08
LSM4-203ENST00000593829 HIST1H2BOP23527 126 aa15.54■□□□□ 0.08
LSM4-203ENST00000593829 HIST1H2BBP33778 126 aa15.54■□□□□ 0.08
LSM4-203ENST00000593829 HIST1H2BDP58876 126 aa15.54■□□□□ 0.08
LSM4-203ENST00000593829 HIST1H2BCP62807 126 aa15.54■□□□□ 0.08
LSM4-203ENST00000593829 MMDQ15546 238 aa15.54■□□□□ 0.08
LSM4-203ENST00000593829 HIST2H2BEQ16778 126 aa15.54■□□□□ 0.08
LSM4-203ENST00000593829 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.54■□□□□ 0.08
LSM4-203ENST00000593829 CYB561D1Q8N8Q1 229 aa15.54■□□□□ 0.08
LSM4-203ENST00000593829 HIST1H2BHQ93079 126 aa15.54■□□□□ 0.08
LSM4-203ENST00000593829 RITA1Q96K30 269 aa15.54■□□□□ 0.08
LSM4-203ENST00000593829 PFDN5Q99471 154 aa15.54■□□□□ 0.08
LSM4-203ENST00000593829 ATP5SQ99766 215 aa15.54■□□□□ 0.08
LSM4-203ENST00000593829 HIST1H2BNQ99877 126 aa15.54■□□□□ 0.08
LSM4-203ENST00000593829 HIST1H2BMQ99879 126 aa15.54■□□□□ 0.08
LSM4-203ENST00000593829 RASL11BQ9BPW5 248 aa15.54■□□□□ 0.08
LSM4-203ENST00000593829 LIN7CQ9NUP9 197 aaKnown RBP15.54■□□□□ 0.08
LSM4-203ENST00000593829 A0A1B0GV50 99 aa15.53■□□□□ 0.08
LSM4-203ENST00000593829 DFFBO76075 338 aa15.53■□□□□ 0.08
LSM4-203ENST00000593829 SLC25A6P12236 298 aa15.53■□□□□ 0.08
LSM4-203ENST00000593829 THBS3P49746 956 aa15.53■□□□□ 0.08
LSM4-203ENST00000593829 TMEM95Q3KNT9 176 aa15.53■□□□□ 0.08
LSM4-203ENST00000593829 HIST3H2BBQ8N257 126 aa15.53■□□□□ 0.08
LSM4-203ENST00000593829 RCC1LQ96I51 464 aaKnown RBP15.53■□□□□ 0.08
LSM4-203ENST00000593829 ADTRPQ96IZ2 230 aa15.53■□□□□ 0.08
LSM4-203ENST00000593829 SSSCA1O60232 199 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms