RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 MDS2Q8NDY4 140 aa11.15□□□□□ -0.62
SMARCA4-216ENST00000591545 ZNF56Q15929 161 aa11.15□□□□□ -0.62
SMARCA4-216ENST00000591545 TEX45Q8NA69 505 aa11.15□□□□□ -0.62
SMARCA4-216ENST00000591545 FBXL15Q9H469 300 aa11.15□□□□□ -0.62
SMARCA4-216ENST00000591545 CGB1A6NKQ9 187 aa11.15□□□□□ -0.63
SMARCA4-216ENST00000591545 F8VVB4 439 aa11.15□□□□□ -0.63
SMARCA4-216ENST00000591545 F8VWA3 439 aa11.15□□□□□ -0.63
SMARCA4-216ENST00000591545 REG1AP05451 166 aa11.15□□□□□ -0.63
SMARCA4-216ENST00000591545 ICAM4Q14773 271 aa11.15□□□□□ -0.63
SMARCA4-216ENST00000591545 SAMD13Q5VXD3 122 aa11.15□□□□□ -0.63
SMARCA4-216ENST00000591545 RTN4RQ9BZR6 473 aa11.15□□□□□ -0.63
SMARCA4-216ENST00000591545 J3QKU1 62 aa11.14□□□□□ -0.63
SMARCA4-216ENST00000591545 ATOH7Q8N100 152 aa11.14□□□□□ -0.63
SMARCA4-216ENST00000591545 PRDM13Q9H4Q3 707 aa11.14□□□□□ -0.63
SMARCA4-216ENST00000591545 C1QTNF9BB2RNN3 333 aa11.14□□□□□ -0.63
SMARCA4-216ENST00000591545 DNAL4O96015 105 aa11.14□□□□□ -0.63
SMARCA4-216ENST00000591545 CGAP01215 116 aa11.14□□□□□ -0.63
SMARCA4-216ENST00000591545 VDAC2P45880 294 aaPredicted RBP11.14□□□□□ -0.63
SMARCA4-216ENST00000591545 TMEM170AQ8WVE7 144 aa11.14□□□□□ -0.63
SMARCA4-216ENST00000591545 A0A1B0GV72 72 aa11.14□□□□□ -0.63
SMARCA4-216ENST00000591545 PROB1E7EW31 1015 aa11.14□□□□□ -0.63
SMARCA4-216ENST00000591545 RPL39P5Q59GN2 51 aa11.14□□□□□ -0.63
SMARCA4-216ENST00000591545 C18orf12Q96KH6 178 aa11.14□□□□□ -0.63
SMARCA4-216ENST00000591545 ALKBH7Q9BT30 221 aaPredicted RBP11.14□□□□□ -0.63
SMARCA4-216ENST00000591545 ASIPP42127 132 aa11.14□□□□□ -0.63
SMARCA4-216ENST00000591545 COLCA1Q6ZS62 124 aa11.14□□□□□ -0.63
SMARCA4-216ENST00000591545 MESP1Q9BRJ9 268 aa11.14□□□□□ -0.63
SMARCA4-216ENST00000591545 SPTBN1Q01082 2364 aaKnown RBP11.14□□□□□ -0.63
SMARCA4-216ENST00000591545 ALPK2Q86TB3 2170 aa11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 FOXI3A8MTJ6 420 aaPredicted RBP11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 LINC00587B1AMM8 73 aa11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 EGR1P18146 543 aa11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 TFF3Q07654 80 aa11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 MYLKQ15746 1914 aa11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 IGFBP2P18065 325 aa11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 BTCP35070 178 aa11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 EMP1P54849 157 aa11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 ABCA4P78363 2273 aa11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 ARHGEF17Q96PE2 2063 aaPredicted RBP11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 NLRC5Q86WI3 1866 aa11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 SCO2A0A1W2PP80 73 aa11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 FGF16O43320 207 aa11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 APOHP02749 345 aaPredicted RBP11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 FAM166AQ6J272 317 aa11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 OR52E5Q8NH55 327 aa11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 PEMTQ9UBM1 199 aa11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 TRBV6-7A0A0A0MS04 114 aa11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 NPFFO15130 113 aa11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 CCL1P22362 96 aa11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 Q0VFX4 171 aa11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 ZNF672Q499Z4 452 aaPredicted RBP11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 ZNF324BQ6AW86 544 aaPredicted RBP11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 TMEM144Q7Z5S9 345 aa11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 NIT1Q86X76 327 aa11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 OR13A1Q8NGR1 328 aa11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 WBP1Q96G27 269 aa11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 FBXL7Q9UJT9 491 aa11.13□□□□□ -0.63
SMARCA4-216ENST00000591545 C17orf98A8MV24 154 aa11.12□□□□□ -0.63
SMARCA4-216ENST00000591545 SRSF6Q13247 344 aaKnown RBP11.12□□□□□ -0.63
SMARCA4-216ENST00000591545 PLA2G2CQ5R387 149 aa11.12□□□□□ -0.63
SMARCA4-216ENST00000591545 ARPC1AQ92747 370 aa11.12□□□□□ -0.63
SMARCA4-216ENST00000591545 PRSS33Q8NF86 280 aa11.12□□□□□ -0.63
SMARCA4-216ENST00000591545 SRCAPQ6ZRS2 3230 aa11.12□□□□□ -0.63
SMARCA4-216ENST00000591545 A0A0G2JNJ9 132 aa11.12□□□□□ -0.63
SMARCA4-216ENST00000591545 LYNX1G3V0Z9 82 aa11.12□□□□□ -0.63
SMARCA4-216ENST00000591545 LYNX1P0DP58 116 aa11.12□□□□□ -0.63
SMARCA4-216ENST00000591545 FOXA3P55318 350 aaPredicted RBP11.12□□□□□ -0.63
SMARCA4-216ENST00000591545 RPL23P62829 140 aaKnown RBP11.12□□□□□ -0.63
SMARCA4-216ENST00000591545 C8orf46Q8TAG6 207 aa11.12□□□□□ -0.63
SMARCA4-216ENST00000591545 SGK494Q96LW2 274 aa11.12□□□□□ -0.63
SMARCA4-216ENST00000591545 KLK15Q9H2R5 256 aa11.12□□□□□ -0.63
SMARCA4-216ENST00000591545 TMEM160Q9NX00 188 aa11.12□□□□□ -0.63
SMARCA4-216ENST00000591545 Q9UFV3 132 aa11.12□□□□□ -0.63
SMARCA4-216ENST00000591545 B4DSR2 109 aa11.12□□□□□ -0.63
SMARCA4-216ENST00000591545 H3BTX0 84 aa11.12□□□□□ -0.63
SMARCA4-216ENST00000591545 CCL20P78556 96 aa11.12□□□□□ -0.63
SMARCA4-216ENST00000591545 ZCCHC24Q8N2G6 241 aaKnown RBP11.12□□□□□ -0.63
SMARCA4-216ENST00000591545 PTPRDP23468 1912 aa11.12□□□□□ -0.63
SMARCA4-216ENST00000591545 PI4KAP42356 2102 aa11.12□□□□□ -0.63
SMARCA4-216ENST00000591545 A0A1W2PRX2 142 aa11.11□□□□□ -0.63
SMARCA4-216ENST00000591545 MBD3L4A6NDZ8 208 aaPredicted RBP11.11□□□□□ -0.63
SMARCA4-216ENST00000591545 MBD3L3A6NE82 208 aaPredicted RBP11.11□□□□□ -0.63
SMARCA4-216ENST00000591545 MBD3L5A6NJ08 208 aaPredicted RBP11.11□□□□□ -0.63
SMARCA4-216ENST00000591545 ORMDL3Q8N138 153 aa11.11□□□□□ -0.63
SMARCA4-216ENST00000591545 ARL6IP6Q8N6S5 226 aa11.11□□□□□ -0.63
SMARCA4-216ENST00000591545 MBD3L2Q8NHZ7 208 aaPredicted RBP11.11□□□□□ -0.63
SMARCA4-216ENST00000591545 RNF126Q9BV68 326 aa11.11□□□□□ -0.63
SMARCA4-216ENST00000591545 MRPL16Q9NX20 251 aaKnown RBP11.11□□□□□ -0.63
SMARCA4-216ENST00000591545 ESPL1Q14674 2120 aa11.11□□□□□ -0.63
SMARCA4-216ENST00000591545 FAM90A9PA6NNJ1 464 aa11.11□□□□□ -0.63
SMARCA4-216ENST00000591545 SLC17A3O00476 420 aa11.11□□□□□ -0.63
SMARCA4-216ENST00000591545 NDUFAF3Q9BU61 184 aa11.11□□□□□ -0.63
SMARCA4-216ENST00000591545 OTORQ9NRC9 128 aa11.11□□□□□ -0.63
SMARCA4-216ENST00000591545 JKAMPQ9P055 326 aa11.11□□□□□ -0.63
SMARCA4-216ENST00000591545 ATP5G3P48201 142 aa11.11□□□□□ -0.63
SMARCA4-216ENST00000591545 SP5Q6BEB4 398 aaPredicted RBP11.11□□□□□ -0.63
SMARCA4-216ENST00000591545 NBASA2RRP1 2371 aa11.11□□□□□ -0.63
SMARCA4-216ENST00000591545 TRAV24A0A0B4J272 114 aa11.11□□□□□ -0.63
SMARCA4-216ENST00000591545 CEACAM4O75871 244 aa11.11□□□□□ -0.63
SMARCA4-216ENST00000591545 PEAR1Q5VY43 1037 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms