RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 ZNF436Q9C0F3 470 aaPredicted RBP9.13□□□□□ -0.95
TPM4-212ENST00000590180 RBM38Q9H0Z9 239 aaKnown RBP9.13□□□□□ -0.95
TPM4-212ENST00000590180 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.13□□□□□ -0.95
TPM4-212ENST00000590180 GAR1Q9NY12 217 aaKnown RBP9.13□□□□□ -0.95
TPM4-212ENST00000590180 SLC2A8Q9NY64 477 aa9.13□□□□□ -0.95
TPM4-212ENST00000590180 IGHV3OR16-8A0A075B7F1 116 aa9.12□□□□□ -0.95
TPM4-212ENST00000590180 A0A0G2JRQ6 117 aa9.12□□□□□ -0.95
TPM4-212ENST00000590180 I3L2K1 104 aa9.12□□□□□ -0.95
TPM4-212ENST00000590180 ZNF701M0R085 212 aaPredicted RBP9.12□□□□□ -0.95
TPM4-212ENST00000590180 NUPL2O15504 423 aaKnown RBP9.12□□□□□ -0.95
TPM4-212ENST00000590180 YIF1AO95070 293 aa9.12□□□□□ -0.95
TPM4-212ENST00000590180 HOXA1P49639 335 aaPredicted RBP9.12□□□□□ -0.95
TPM4-212ENST00000590180 ELLP55199 621 aaPredicted RBP9.12□□□□□ -0.95
TPM4-212ENST00000590180 CD81P60033 236 aa9.12□□□□□ -0.95
TPM4-212ENST00000590180 SPANXN2Q5MJ10 180 aa9.12□□□□□ -0.95
TPM4-212ENST00000590180 RBPMS2Q6ZRY4 209 aaKnown RBP9.12□□□□□ -0.95
TPM4-212ENST00000590180 FAM219AQ8IW50 185 aa9.12□□□□□ -0.95
TPM4-212ENST00000590180 LHFPL5Q8TAF8 219 aa9.12□□□□□ -0.95
TPM4-212ENST00000590180 RBPMSQ93062 196 aaKnown RBP9.12□□□□□ -0.95
TPM4-212ENST00000590180 MARC2Q969Z3 335 aa9.12□□□□□ -0.95
TPM4-212ENST00000590180 ATP6V0BQ99437 205 aa9.12□□□□□ -0.95
TPM4-212ENST00000590180 NEURL2Q9BR09 285 aa9.12□□□□□ -0.95
TPM4-212ENST00000590180 ZMAT4Q9H898 229 aa9.12□□□□□ -0.95
TPM4-212ENST00000590180 C19orf73Q9NVV2 129 aa9.12□□□□□ -0.95
TPM4-212ENST00000590180 MRPL27Q9P0M9 148 aaKnown RBP9.12□□□□□ -0.95
TPM4-212ENST00000590180 A8MWP6 167 aa9.11□□□□□ -0.95
TPM4-212ENST00000590180 NDUFA4O00483 81 aa9.11□□□□□ -0.95
TPM4-212ENST00000590180 ZNF207O43670 478 aaKnown RBP9.11□□□□□ -0.95
TPM4-212ENST00000590180 SCAF4O95104 1147 aaKnown RBP9.11□□□□□ -0.95
TPM4-212ENST00000590180 CTSGP08311 255 aa9.11□□□□□ -0.95
TPM4-212ENST00000590180 CD7P09564 240 aa9.11□□□□□ -0.95
TPM4-212ENST00000590180 ADMP35318 185 aa9.11□□□□□ -0.95
TPM4-212ENST00000590180 SPCS3P61009 180 aa9.11□□□□□ -0.95
TPM4-212ENST00000590180 KLF9Q13886 244 aaPredicted RBP9.11□□□□□ -0.95
TPM4-212ENST00000590180 BTNL8Q6UX41 500 aa9.11□□□□□ -0.95
TPM4-212ENST00000590180 CCDC190Q86UF4 302 aa9.11□□□□□ -0.95
TPM4-212ENST00000590180 ZNF114Q8NC26 417 aa9.11□□□□□ -0.95
TPM4-212ENST00000590180 DUSP18Q8NEJ0 188 aa9.11□□□□□ -0.95
TPM4-212ENST00000590180 TMEM190Q8WZ59 177 aa9.11□□□□□ -0.95
TPM4-212ENST00000590180 TXN2Q99757 166 aa9.11□□□□□ -0.95
TPM4-212ENST00000590180 PRR13Q9NZ81 148 aa9.11□□□□□ -0.95
TPM4-212ENST00000590180 CACNG5Q9UF02 275 aa9.11□□□□□ -0.95
TPM4-212ENST00000590180 MLXQ9UH92 298 aa9.11□□□□□ -0.95
TPM4-212ENST00000590180 TMEM56-RWDD3S4R434 201 aa9.11□□□□□ -0.95
TPM4-212ENST00000590180 V9GYH0 126 aa9.11□□□□□ -0.95
TPM4-212ENST00000590180 DNAH9Q9NYC9 4486 aa9.11□□□□□ -0.95
TPM4-212ENST00000590180 COL7A1Q02388 2944 aa9.11□□□□□ -0.95
TPM4-212ENST00000590180 A8MZ25 164 aa9.1□□□□□ -0.95
TPM4-212ENST00000590180 OR11H12B2RN74 326 aa9.1□□□□□ -0.95
TPM4-212ENST00000590180 F8W735 103 aaPredicted RBP9.1□□□□□ -0.95
TPM4-212ENST00000590180 GNG7O60262 68 aa9.1□□□□□ -0.95
TPM4-212ENST00000590180 C8orf88P0DMB2 117 aa9.1□□□□□ -0.95
TPM4-212ENST00000590180 ANXA3P12429 323 aa9.1□□□□□ -0.95
TPM4-212ENST00000590180 NPBWR1P48145 328 aa9.1□□□□□ -0.95
TPM4-212ENST00000590180 INPP1P49441 399 aa9.1□□□□□ -0.95
TPM4-212ENST00000590180 RELQ04864 619 aaPredicted RBP9.1□□□□□ -0.95
TPM4-212ENST00000590180 TMEM187Q14656 261 aa9.1□□□□□ -0.95
TPM4-212ENST00000590180 ZNF79Q15937 498 aa9.1□□□□□ -0.95
TPM4-212ENST00000590180 SLC16A13Q7RTY0 426 aa9.1□□□□□ -0.95
TPM4-212ENST00000590180 TMED4Q7Z7H5 227 aa9.1□□□□□ -0.95
TPM4-212ENST00000590180 TMEM61Q8N0U2 210 aa9.1□□□□□ -0.95
TPM4-212ENST00000590180 DEFB125Q8N687 156 aa9.1□□□□□ -0.95
TPM4-212ENST00000590180 TMEM230Q96A57 120 aa9.1□□□□□ -0.95
TPM4-212ENST00000590180 GALNT14Q96FL9 552 aa9.1□□□□□ -0.95
TPM4-212ENST00000590180 RCHY1Q96PM5 261 aa9.1□□□□□ -0.95
TPM4-212ENST00000590180 HEYLQ9NQ87 328 aaPredicted RBP9.1□□□□□ -0.95
TPM4-212ENST00000590180 CEBPZOSA8MTT3 80 aa9.09□□□□□ -0.95
TPM4-212ENST00000590180 INS-IGF2F8WCM5 200 aa9.09□□□□□ -0.95
TPM4-212ENST00000590180 RNASE2P10153 161 aaKnown RBP9.09□□□□□ -0.95
TPM4-212ENST00000590180 MLANAQ16655 118 aa9.09□□□□□ -0.95
TPM4-212ENST00000590180 ANKRD55Q3KP44 614 aa9.09□□□□□ -0.95
TPM4-212ENST00000590180 LGI3Q8N145 548 aa9.09□□□□□ -0.95
TPM4-212ENST00000590180 OR52B4Q8NGK2 314 aa9.09□□□□□ -0.95
TPM4-212ENST00000590180 OR52E5Q8NH55 327 aa9.09□□□□□ -0.95
TPM4-212ENST00000590180 IL22RA2Q969J5 263 aa9.09□□□□□ -0.95
TPM4-212ENST00000590180 TRIM63Q969Q1 353 aa9.09□□□□□ -0.95
TPM4-212ENST00000590180 DAZ1Q9NQZ3 744 aaKnown RBP9.09□□□□□ -0.95
TPM4-212ENST00000590180 TRAV25A0A0B4J276 109 aa9.08□□□□□ -0.96
TPM4-212ENST00000590180 K7EMT4 169 aa9.08□□□□□ -0.96
TPM4-212ENST00000590180 CORTO00230 105 aa9.08□□□□□ -0.96
TPM4-212ENST00000590180 NXPH3O95157 252 aa9.08□□□□□ -0.96
TPM4-212ENST00000590180 SULT1A3P0DMM9 295 aa9.08□□□□□ -0.96
TPM4-212ENST00000590180 SULT1A4P0DMN0 295 aa9.08□□□□□ -0.96
TPM4-212ENST00000590180 FCGR2BP31994 310 aaPredicted RBP9.08□□□□□ -0.96
TPM4-212ENST00000590180 HAGHQ16775 308 aa9.08□□□□□ -0.96
TPM4-212ENST00000590180 LAMTOR1Q6IAA8 161 aa9.08□□□□□ -0.96
TPM4-212ENST00000590180 LYZL2Q7Z4W2 148 aa9.08□□□□□ -0.96
TPM4-212ENST00000590180 SLC25A21Q9BQT8 299 aaPredicted RBP9.08□□□□□ -0.96
TPM4-212ENST00000590180 NDUFA13Q9P0J0 144 aa9.08□□□□□ -0.96
TPM4-212ENST00000590180 TENM3Q9P273 2699 aa9.08□□□□□ -0.96
TPM4-212ENST00000590180 STAB2Q8WWQ8 2551 aa9.08□□□□□ -0.96
TPM4-212ENST00000590180 IGHV3-49A0A0A0MS15 119 aa9.07□□□□□ -0.96
TPM4-212ENST00000590180 A0A0B4J2A0 478 aa9.07□□□□□ -0.96
TPM4-212ENST00000590180 LINC00854A0A1B0GVQ3 168 aa9.07□□□□□ -0.96
TPM4-212ENST00000590180 C15orf62A8K5M9 175 aa9.07□□□□□ -0.96
TPM4-212ENST00000590180 TMEM50AO95807 157 aa9.07□□□□□ -0.96
TPM4-212ENST00000590180 VAMP1P23763 118 aa9.07□□□□□ -0.96
TPM4-212ENST00000590180 OPRK1P41145 380 aa9.07□□□□□ -0.96
TPM4-212ENST00000590180 HTR2BP41595 481 aa9.07□□□□□ -0.96
TPM4-212ENST00000590180 SUPT4H1P63272 117 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms