RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 NPBWR2P48146 333 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 RBP2P50120 134 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 FUT6P51993 359 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 RND2P52198 227 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 MTCP1P56278 107 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 RBM11P57052 281 aaKnown RBP6.04□□□□□ -1.44
SMAD4-209ENST00000589941 LINC00205P59089 165 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 RSU1Q15404 277 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 TWIST1Q15672 202 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 SNAI3Q3KNW1 292 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 SLC35E3Q7Z769 313 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 OSR2Q8N2R0 312 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 LY6G5BQ8NDX9 201 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 OR52M1Q8NGK5 317 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 OR1F12Q8NHA8 337 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 PLPPR1Q8TBJ4 325 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 GNPNAT1Q96EK6 184 aaPredicted RBP6.04□□□□□ -1.44
SMAD4-209ENST00000589941 TM2D3Q9BRN9 247 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 FAAP24Q9BTP7 215 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 PARD6GQ9BYG4 376 aaPredicted RBP6.04□□□□□ -1.44
SMAD4-209ENST00000589941 SMIM3Q9BZL3 60 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 SLC25A31Q9H0C2 315 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 SH3BGRL3Q9H299 93 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 NIT2Q9NQR4 276 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 GPR173Q9NS66 373 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 UFSP2Q9NUQ7 469 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 TMEM242Q9NWH2 141 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 SMAD5-AS1Q9Y6J3 95 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 IGHV3OR15-7A0A075B7D8 119 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 C3orf85A0A1B0GTC6 90 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 A0A1W2PPE2 198 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 LRRC30A6NM36 301 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 F5H5K5 113 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 PHOX2AO14813 284 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 XRCC2O43543 280 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 DIRAS3O95661 229 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 LY6G6CO95867 125 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 PPYP01298 95 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 HBE1P02100 147 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 SELLP14151 372 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 FUT3P21217 361 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 AADACP22760 399 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 GABRR1P24046 479 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 ATP6V0CP27449 155 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 GUCA1AP43080 201 aaPredicted RBP6.03□□□□□ -1.44
SMAD4-209ENST00000589941 FHITP49789 147 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 ZNF616Q08AN1 781 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 GNMTQ14749 295 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 ABCA11PQ4W5N1 156 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 KHDC3LQ587J8 217 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 SOHLH1Q5JUK2 328 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 OR2T2Q6IF00 324 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 DPPA2Q7Z7J5 298 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 FOXRED2Q8IWF2 684 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 SELENOHQ8IZQ5 122 aaKnown RBP6.03□□□□□ -1.44
SMAD4-209ENST00000589941 C1orf87Q8N0U7 546 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 FAM24BQ8N5W8 94 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 TMEM252Q8N6L7 170 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 ARL6IP6Q8N6S5 226 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 SLC35G3Q8N808 338 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 ZNF565Q8N9K5 539 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 SUMF2Q8NBJ7 301 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 ISOC2Q96AB3 205 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 REEP6Q96HR9 211 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 TP53RKQ96S44 253 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 MCRIP2Q9BUT9 160 aaKnown RBP6.03□□□□□ -1.44
SMAD4-209ENST00000589941 OR2H1Q9GZK4 316 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 EIF5A2Q9GZV4 153 aaKnown RBP6.03□□□□□ -1.44
SMAD4-209ENST00000589941 OPA3Q9H6K4 179 aa6.03□□□□□ -1.44
SMAD4-209ENST00000589941 FAM230AA0A1W2PPH8 454 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 A6NDX4 124 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 ZNF850A8MQ14 1090 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 SEC14L6B5MCN3 397 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 NPIPB11E5RHQ5 1161 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 H0Y980 276 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 H3BQ15 152 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 M0R036 132 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 GEMIN2O14893 280 aaKnown RBP6.02□□□□□ -1.45
SMAD4-209ENST00000589941 HSPA12AO43301 675 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 OR2C1O95371 312 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 TOMM40O96008 361 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 NRASP01111 189 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 ARG1P05089 322 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 NQO2P16083 231 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 GNRHRP30968 328 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 AKR1C3P42330 323 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 NKX2-1P43699 371 aaPredicted RBP6.02□□□□□ -1.45
SMAD4-209ENST00000589941 GLIPR1P48060 266 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 UBE2E1P51965 193 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 TAS2R30P59541 319 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 HERV-K104P61576 105 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 CCL20P78556 96 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 ZNF92Q03936 586 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 PNRC1Q12796 327 aaPredicted RBP6.02□□□□□ -1.45
SMAD4-209ENST00000589941 IL24Q13007 206 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 ELOBQ15370 118 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 SP6Q3SY56 376 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 KRBOX4Q5JUW0 171 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 ZNF880Q6PDB4 577 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 TMEM182Q6ZP80 229 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms