RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 COL8A1P27658 744 aa12.01□□□□□ -0.49
RETREG3-208ENST00000589797 PRNTQ86SH4 94 aa12.01□□□□□ -0.49
RETREG3-208ENST00000589797 Q8WTZ3 238 aa12.01□□□□□ -0.49
RETREG3-208ENST00000589797 RBM14Q96PK6 669 aaKnown RBP12.01□□□□□ -0.49
RETREG3-208ENST00000589797 SMDT1Q9H4I9 107 aa12.01□□□□□ -0.49
RETREG3-208ENST00000589797 ZNF672Q499Z4 452 aaPredicted RBP12□□□□□ -0.49
RETREG3-208ENST00000589797 KLF17Q5JT82 389 aaPredicted RBP12□□□□□ -0.49
RETREG3-208ENST00000589797 PACRGQ96M98 296 aaPredicted RBP12□□□□□ -0.49
RETREG3-208ENST00000589797 ABCA12Q86UK0 2595 aa12□□□□□ -0.49
RETREG3-208ENST00000589797 FASNP49327 2511 aaKnown RBP12□□□□□ -0.49
RETREG3-208ENST00000589797 AGAP20933 346 aa12□□□□□ -0.49
RETREG3-208ENST00000589797 BRS3P32247 399 aa12□□□□□ -0.49
RETREG3-208ENST00000589797 LGALS7P47929 136 aa12□□□□□ -0.49
RETREG3-208ENST00000589797 AMTP48728 403 aa12□□□□□ -0.49
RETREG3-208ENST00000589797 KLRD1Q13241 179 aa12□□□□□ -0.49
RETREG3-208ENST00000589797 RPEL1Q2QD12 228 aa12□□□□□ -0.49
RETREG3-208ENST00000589797 RNASEKQ6P5S7 137 aaKnown RBP12□□□□□ -0.49
RETREG3-208ENST00000589797 DERL1Q9BUN8 251 aa12□□□□□ -0.49
RETREG3-208ENST00000589797 LINC00527Q9UJ94 153 aa12□□□□□ -0.49
RETREG3-208ENST00000589797 TANC2Q9HCD6 1990 aa12□□□□□ -0.49
RETREG3-208ENST00000589797 IGHV3-66A0A0C4DH42 116 aa12□□□□□ -0.49
RETREG3-208ENST00000589797 TMEM178BH3BS89 294 aa12□□□□□ -0.49
RETREG3-208ENST00000589797 C1QTNF9P0C862 333 aa12□□□□□ -0.49
RETREG3-208ENST00000589797 CRIP3Q6Q6R5 217 aa12□□□□□ -0.49
RETREG3-208ENST00000589797 OR1L6Q8NGR2 347 aa12□□□□□ -0.49
RETREG3-208ENST00000589797 GAFA1Q96PS6 74 aa12□□□□□ -0.49
RETREG3-208ENST00000589797 ELOVL1Q9BW60 279 aa12□□□□□ -0.49
RETREG3-208ENST00000589797 TRAV5A0A0B4J249 113 aa11.99□□□□□ -0.49
RETREG3-208ENST00000589797 C8orf88P0DMB2 117 aa11.99□□□□□ -0.49
RETREG3-208ENST00000589797 ATP5J2P56134 94 aa11.99□□□□□ -0.49
RETREG3-208ENST00000589797 C11orf53Q8IXP5 236 aa11.99□□□□□ -0.49
RETREG3-208ENST00000589797 ZNF430Q9H8G1 570 aaPredicted RBP11.99□□□□□ -0.49
RETREG3-208ENST00000589797 CHODLQ9H9P2 273 aa11.99□□□□□ -0.49
RETREG3-208ENST00000589797 SEPSECSQ9HD40 501 aaKnown RBP11.99□□□□□ -0.49
RETREG3-208ENST00000589797 ZNF207O43670 478 aaKnown RBP11.99□□□□□ -0.49
RETREG3-208ENST00000589797 PYYP10082 97 aa11.99□□□□□ -0.49
RETREG3-208ENST00000589797 TREML4Q6UXN2 200 aa11.99□□□□□ -0.49
RETREG3-208ENST00000589797 SEM1Q6ZVN7 128 aa11.99□□□□□ -0.49
RETREG3-208ENST00000589797 PERPQ96FX8 193 aa11.99□□□□□ -0.49
RETREG3-208ENST00000589797 TXN2Q99757 166 aa11.99□□□□□ -0.49
RETREG3-208ENST00000589797 IFI27L2Q9H2X8 130 aa11.99□□□□□ -0.49
RETREG3-208ENST00000589797 NAGKQ9UJ70 344 aa11.99□□□□□ -0.49
RETREG3-208ENST00000589797 HIVEP2P31629 2446 aa11.99□□□□□ -0.49
RETREG3-208ENST00000589797 C15orf61A6NNL5 157 aa11.99□□□□□ -0.49
RETREG3-208ENST00000589797 CD81P60033 236 aa11.99□□□□□ -0.49
RETREG3-208ENST00000589797 MSMPQ1L6U9 139 aa11.99□□□□□ -0.49
RETREG3-208ENST00000589797 LINC00305Q7Z4B0 112 aa11.99□□□□□ -0.49
RETREG3-208ENST00000589797 OSR1Q8TAX0 266 aaPredicted RBP11.99□□□□□ -0.49
RETREG3-208ENST00000589797 UPK2O00526 184 aa11.98□□□□□ -0.49
RETREG3-208ENST00000589797 IMMP2LQ96T52 175 aa11.98□□□□□ -0.49
RETREG3-208ENST00000589797 LRP4O75096 1905 aa11.98□□□□□ -0.49
RETREG3-208ENST00000589797 Q6ZPA2 131 aa11.98□□□□□ -0.49
RETREG3-208ENST00000589797 SEC14L6B5MCN3 397 aa11.98□□□□□ -0.49
RETREG3-208ENST00000589797 CBLN1P23435 193 aa11.98□□□□□ -0.49
RETREG3-208ENST00000589797 DIAPH2-AS1Q14236 149 aa11.98□□□□□ -0.49
RETREG3-208ENST00000589797 UNQ5815/PRO19632Q6UWF5 114 aa11.98□□□□□ -0.49
RETREG3-208ENST00000589797 WFDC3Q8IUB2 231 aa11.98□□□□□ -0.49
RETREG3-208ENST00000589797 ANAPC16Q96DE5 110 aa11.98□□□□□ -0.49
RETREG3-208ENST00000589797 TRBV6-6A0A0A6YYG2 114 aa11.97□□□□□ -0.49
RETREG3-208ENST00000589797 MUC21A0A0G2JKD1 596 aa11.97□□□□□ -0.49
RETREG3-208ENST00000589797 MUC21A0A140T8X8 626 aa11.97□□□□□ -0.49
RETREG3-208ENST00000589797 OR2J3O76001 311 aa11.97□□□□□ -0.49
RETREG3-208ENST00000589797 IL15RAQ13261 267 aa11.97□□□□□ -0.49
RETREG3-208ENST00000589797 MUC21Q5SSG8 566 aa11.97□□□□□ -0.49
RETREG3-208ENST00000589797 ZNF788Q6ZQV5 615 aa11.97□□□□□ -0.49
RETREG3-208ENST00000589797 C22orf34Q6ZV56 151 aa11.97□□□□□ -0.49
RETREG3-208ENST00000589797 SLC25A33Q9BSK2 321 aa11.97□□□□□ -0.49
RETREG3-208ENST00000589797 DPM3Q9P2X0 92 aa11.97□□□□□ -0.49
RETREG3-208ENST00000589797 WNT2P09544 360 aa11.97□□□□□ -0.49
RETREG3-208ENST00000589797 HIST1H1BP16401 226 aaKnown RBP11.97□□□□□ -0.49
RETREG3-208ENST00000589797 TMEM133Q9H2Q1 129 aa11.97□□□□□ -0.49
RETREG3-208ENST00000589797 HIGD1AQ9Y241 93 aa11.97□□□□□ -0.49
RETREG3-208ENST00000589797 K7ENP7 123 aa11.97□□□□□ -0.49
RETREG3-208ENST00000589797 FOXH1O75593 365 aa11.97□□□□□ -0.49
RETREG3-208ENST00000589797 Q6ZS49 121 aa11.97□□□□□ -0.49
RETREG3-208ENST00000589797 P2RX4Q99571 388 aa11.97□□□□□ -0.49
RETREG3-208ENST00000589797 TEX50A0A1B0GTY4 177 aa11.96□□□□□ -0.49
RETREG3-208ENST00000589797 IL4P05112 153 aa11.96□□□□□ -0.49
RETREG3-208ENST00000589797 SRSF7Q16629 238 aaKnown RBP eCLIP11.96□□□□□ -0.49
RETREG3-208ENST00000589797 HLA-DRB5Q30154 266 aa11.96□□□□□ -0.49
RETREG3-208ENST00000589797 CENPWQ5EE01 88 aa11.96□□□□□ -0.49
RETREG3-208ENST00000589797 TMEM14EPQ6UXP3 125 aa11.96□□□□□ -0.49
RETREG3-208ENST00000589797 FOXA2Q9Y261 457 aaPredicted RBP11.96□□□□□ -0.49
RETREG3-208ENST00000589797 TRBV23-1A0A0A0MS06 115 aa11.96□□□□□ -0.49
RETREG3-208ENST00000589797 TIMM23O14925 209 aa11.96□□□□□ -0.49
RETREG3-208ENST00000589797 LYL1P12980 280 aa11.96□□□□□ -0.49
RETREG3-208ENST00000589797 C19orf35Q6ZS72 473 aa11.96□□□□□ -0.49
RETREG3-208ENST00000589797 OR51M1Q9H341 326 aa11.96□□□□□ -0.49
RETREG3-208ENST00000589797 ZNF586Q9NXT0 402 aa11.96□□□□□ -0.49
RETREG3-208ENST00000589797 C1RLQ9NZP8 487 aa11.96□□□□□ -0.49
RETREG3-208ENST00000589797 WDR83OSQ9Y284 106 aa11.96□□□□□ -0.49
RETREG3-208ENST00000589797 NUP210LQ5VU65 1888 aa11.96□□□□□ -0.49
RETREG3-208ENST00000589797 C15orf62A8K5M9 175 aa11.96□□□□□ -0.5
RETREG3-208ENST00000589797 HSBP1L1C9JCN9 74 aa11.96□□□□□ -0.5
RETREG3-208ENST00000589797 MEF2CQ06413 473 aaPredicted RBP11.96□□□□□ -0.5
RETREG3-208ENST00000589797 IBA57Q5T440 356 aaKnown RBP11.96□□□□□ -0.5
RETREG3-208ENST00000589797 HEPN1Q6WQI6 88 aa11.96□□□□□ -0.5
RETREG3-208ENST00000589797 SDF2L1Q9HCN8 221 aa11.96□□□□□ -0.5
RETREG3-208ENST00000589797 TGOLN2O43493 480 aa11.96□□□□□ -0.5
RETREG3-208ENST00000589797 P01737 135 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms