RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	KRAS	P01116	189 aa		12.53	□□□□□ -0.4
DDX39A-209	ENST00000589318	FOXL1	Q12952	345 aa		12.53	□□□□□ -0.4
DDX39A-209	ENST00000589318	TPTE2P1	Q5T6R2	138 aa		12.53	□□□□□ -0.4
DDX39A-209	ENST00000589318	LCN15	Q6UWW0	184 aa		12.53	□□□□□ -0.4
DDX39A-209	ENST00000589318	SMIM15	Q7Z3B0	74 aa		12.53	□□□□□ -0.4
DDX39A-209	ENST00000589318	NECAP1	Q8NC96	275 aa		12.53	□□□□□ -0.4
DDX39A-209	ENST00000589318	C8orf46	Q8TAG6	207 aa		12.53	□□□□□ -0.4
DDX39A-209	ENST00000589318	ZNF596	Q8TC21	504 aa		12.53	□□□□□ -0.4
DDX39A-209	ENST00000589318	TRAV9-1	A0A075B6T8	112 aa		12.52	□□□□□ -0.4
DDX39A-209	ENST00000589318	RBFOX2	O43251	390 aa	Known RBP eCLIP	12.52	□□□□□ -0.4	2e-7	■■□□□ 14.5
DDX39A-209	ENST00000589318	CHST1	O43916	411 aa		12.52	□□□□□ -0.4
DDX39A-209	ENST00000589318	EFNA4	P52798	201 aa		12.52	□□□□□ -0.4
DDX39A-209	ENST00000589318	HBG1	P69891	147 aa		12.52	□□□□□ -0.4
DDX39A-209	ENST00000589318	HBG2	P69892	147 aa		12.52	□□□□□ -0.4
DDX39A-209	ENST00000589318	ZNF295-AS1	Q8N0V1	137 aa		12.52	□□□□□ -0.4
DDX39A-209	ENST00000589318	OR8B3	Q8NGG8	313 aa		12.52	□□□□□ -0.4
DDX39A-209	ENST00000589318	OR8B2	Q96RD0	313 aa		12.52	□□□□□ -0.4
DDX39A-209	ENST00000589318	TACC2	O95359	2948 aa		12.52	□□□□□ -0.4
DDX39A-209	ENST00000589318	ARHGAP32	A7KAX9	2087 aa		12.52	□□□□□ -0.41
DDX39A-209	ENST00000589318	FCGR3B	O75015	233 aa		12.52	□□□□□ -0.41
DDX39A-209	ENST00000589318	IGHV1-8	P0DP01	117 aa		12.52	□□□□□ -0.41
DDX39A-209	ENST00000589318	PTTG1IP	P53801	180 aa		12.52	□□□□□ -0.41
DDX39A-209	ENST00000589318	C8orf31	Q8N9H6	132 aa		12.52	□□□□□ -0.41
DDX39A-209	ENST00000589318	SLC24A4	Q8NFF2	622 aa		12.52	□□□□□ -0.41
DDX39A-209	ENST00000589318	PATZ1	Q9HBE1	687 aa	Known RBP	12.52	□□□□□ -0.41
DDX39A-209	ENST00000589318	SLC45A2	Q9UMX9	530 aa		12.52	□□□□□ -0.41
DDX39A-209	ENST00000589318	ASH1L	Q9NR48	2969 aa	Known RBP	12.52	□□□□□ -0.41
DDX39A-209	ENST00000589318	PPBP	P02775	128 aa		12.51	□□□□□ -0.41
DDX39A-209	ENST00000589318	PAX9	P55771	341 aa		12.51	□□□□□ -0.41
DDX39A-209	ENST00000589318	RPS20	P60866	119 aa	Known RBP	12.51	□□□□□ -0.41
DDX39A-209	ENST00000589318	YPEL3	P61236	119 aa	Predicted RBP	12.51	□□□□□ -0.41
DDX39A-209	ENST00000589318	ZNF726P1	Q15940	193 aa		12.51	□□□□□ -0.41
DDX39A-209	ENST00000589318	ATP6V1F	Q16864	119 aa		12.51	□□□□□ -0.41
DDX39A-209	ENST00000589318	LRRC75B	Q2VPJ9	315 aa		12.51	□□□□□ -0.41
DDX39A-209	ENST00000589318	TMEM144	Q7Z5S9	345 aa		12.51	□□□□□ -0.41
DDX39A-209	ENST00000589318	LINC00311	Q8N616	119 aa		12.51	□□□□□ -0.41
DDX39A-209	ENST00000589318	LY6G5B	Q8NDX9	201 aa		12.51	□□□□□ -0.41
DDX39A-209	ENST00000589318	SLC39A9	Q9NUM3	307 aa		12.51	□□□□□ -0.41
DDX39A-209	ENST00000589318	C22orf46	C9J442	243 aa		12.5	□□□□□ -0.41
DDX39A-209	ENST00000589318	TOMM40	O96008	361 aa		12.5	□□□□□ -0.41
DDX39A-209	ENST00000589318	THBS3	P49746	956 aa		12.5	□□□□□ -0.41
DDX39A-209	ENST00000589318	ZNF833P	Q6ZTB9	187 aa		12.5	□□□□□ -0.41
DDX39A-209	ENST00000589318	LHX4	Q969G2	390 aa		12.5	□□□□□ -0.41
DDX39A-209	ENST00000589318	CIB3	Q96Q77	187 aa	Predicted RBP	12.5	□□□□□ -0.41
DDX39A-209	ENST00000589318	S1PR3	Q99500	378 aa		12.5	□□□□□ -0.41
DDX39A-209	ENST00000589318	PARL	Q9H300	379 aa		12.5	□□□□□ -0.41
DDX39A-209	ENST00000589318	UQCR10	Q9UDW1	63 aa		12.5	□□□□□ -0.41
DDX39A-209	ENST00000589318		J3QR06	171 aa		12.5	□□□□□ -0.41
DDX39A-209	ENST00000589318	CT45A6	P0DMU7	189 aa		12.5	□□□□□ -0.41
DDX39A-209	ENST00000589318	CT45A5	P0DMU8	189 aa		12.5	□□□□□ -0.41
DDX39A-209	ENST00000589318	CT45A7	P0DMV0	189 aa		12.5	□□□□□ -0.41
DDX39A-209	ENST00000589318	IL3RA	P26951	378 aa		12.5	□□□□□ -0.41
DDX39A-209	ENST00000589318	UBE2V1	Q13404	147 aa		12.5	□□□□□ -0.41
DDX39A-209	ENST00000589318	CRYBG3	Q68DQ2	2970 aa		12.5	□□□□□ -0.41
DDX39A-209	ENST00000589318	PPIAL4C	A0A0B4J2A2	164 aa		12.49	□□□□□ -0.41
DDX39A-209	ENST00000589318	PPIAL4G	P0DN37	164 aa		12.49	□□□□□ -0.41
DDX39A-209	ENST00000589318	HNF1A	P20823	631 aa		12.49	□□□□□ -0.41
DDX39A-209	ENST00000589318	KIR2DS2	P43631	304 aa		12.49	□□□□□ -0.41
DDX39A-209	ENST00000589318	GPR6	P46095	362 aa	Predicted RBP	12.49	□□□□□ -0.41
DDX39A-209	ENST00000589318	DLX1	P56177	255 aa		12.49	□□□□□ -0.41
DDX39A-209	ENST00000589318	ADTRP	Q96IZ2	230 aa		12.49	□□□□□ -0.41
DDX39A-209	ENST00000589318	ELOVL1	Q9BW60	279 aa		12.49	□□□□□ -0.41
DDX39A-209	ENST00000589318	TMEM133	Q9H2Q1	129 aa		12.49	□□□□□ -0.41
DDX39A-209	ENST00000589318	LRRK2	Q5S007	2527 aa		12.49	□□□□□ -0.41
DDX39A-209	ENST00000589318		F6UZH7	168 aa		12.49	□□□□□ -0.41
DDX39A-209	ENST00000589318	RBP4	P02753	201 aa		12.49	□□□□□ -0.41
DDX39A-209	ENST00000589318	BATF	Q16520	125 aa		12.49	□□□□□ -0.41
DDX39A-209	ENST00000589318	OR5AU1	Q8NGC0	362 aa		12.49	□□□□□ -0.41
DDX39A-209	ENST00000589318	RNASE8	Q8TDE3	154 aa	Known RBP	12.49	□□□□□ -0.41
DDX39A-209	ENST00000589318	ST6GALNAC6	Q969X2	333 aa		12.49	□□□□□ -0.41
DDX39A-209	ENST00000589318	RPUSD4	Q96CM3	377 aa	Known RBP	12.49	□□□□□ -0.41
DDX39A-209	ENST00000589318	RNF2	Q99496	336 aa		12.49	□□□□□ -0.41
DDX39A-209	ENST00000589318	CHD6	Q8TD26	2715 aa		12.48	□□□□□ -0.41
DDX39A-209	ENST00000589318		A0A0U1RQK1	487 aa		12.48	□□□□□ -0.41
DDX39A-209	ENST00000589318	CTXND1	A0A1B0GTU2	59 aa		12.48	□□□□□ -0.41
DDX39A-209	ENST00000589318	ZNF320	A2RRD8	509 aa		12.48	□□□□□ -0.41
DDX39A-209	ENST00000589318	FAM90A26	D6RGX4	464 aa		12.48	□□□□□ -0.41
DDX39A-209	ENST00000589318	ZNF137P	P52743	207 aa		12.48	□□□□□ -0.41
DDX39A-209	ENST00000589318	H2BFWT	Q7Z2G1	175 aa		12.48	□□□□□ -0.41
DDX39A-209	ENST00000589318	ABHD12	Q8N2K0	398 aa		12.48	□□□□□ -0.41
DDX39A-209	ENST00000589318	ZNF525	Q8N782	197 aa		12.48	□□□□□ -0.41
DDX39A-209	ENST00000589318	OR4S2	Q8NH73	311 aa		12.48	□□□□□ -0.41
DDX39A-209	ENST00000589318	OR9G1	Q8NH87	305 aa		12.48	□□□□□ -0.41
DDX39A-209	ENST00000589318	HSPB7	Q9UBY9	170 aa		12.48	□□□□□ -0.41
DDX39A-209	ENST00000589318	TET2	Q6N021	2002 aa	Predicted RBP	12.48	□□□□□ -0.41
DDX39A-209	ENST00000589318	SYNGR2	O43760	224 aa		12.47	□□□□□ -0.41
DDX39A-209	ENST00000589318	IGHV4-39	P01824	125 aa		12.47	□□□□□ -0.41
DDX39A-209	ENST00000589318	OR9G9	P0C7N8	305 aa		12.47	□□□□□ -0.41
DDX39A-209	ENST00000589318	FGF8	P55075	233 aa	Predicted RBP	12.47	□□□□□ -0.41
DDX39A-209	ENST00000589318	DIAPH2-AS1	Q14236	149 aa		12.47	□□□□□ -0.41
DDX39A-209	ENST00000589318	CST9LP1	Q5W188	147 aa		12.47	□□□□□ -0.41
DDX39A-209	ENST00000589318		Q6ZWC4	215 aa		12.47	□□□□□ -0.41
DDX39A-209	ENST00000589318	VKORC1L1	Q8N0U8	176 aa		12.47	□□□□□ -0.41
DDX39A-209	ENST00000589318	TMEM256	Q8N2U0	113 aa		12.47	□□□□□ -0.41
DDX39A-209	ENST00000589318	KLHDC1	Q8N7A1	406 aa		12.47	□□□□□ -0.41
DDX39A-209	ENST00000589318	ZNF738	Q8NE65	137 aa		12.47	□□□□□ -0.41
DDX39A-209	ENST00000589318	RSG1	Q9BU20	258 aa		12.47	□□□□□ -0.41
DDX39A-209	ENST00000589318	SSBP3	Q9BWW4	388 aa	Predicted RBP	12.47	□□□□□ -0.41
DDX39A-209	ENST00000589318	MRPL20	Q9BYC9	149 aa	Known RBP	12.47	□□□□□ -0.41
DDX39A-209	ENST00000589318	PAM16	Q9Y3D7	125 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms