RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 GOLT1AQ6ZVE7 132 aa4.15□□□□□ -1.75
VMP1-208ENST00000588617 CENPHQ9H3R5 247 aa4.15□□□□□ -1.75
VMP1-208ENST00000588617 XAGE1AQ9HD64 81 aa4.15□□□□□ -1.75
VMP1-208ENST00000588617 IL36BQ9NZH7 164 aa4.15□□□□□ -1.75
VMP1-208ENST00000588617 PRO0461Q9UI25 63 aa4.15□□□□□ -1.75
VMP1-208ENST00000588617 KDM5AP29375 1690 aaKnown RBP4.15□□□□□ -1.75
VMP1-208ENST00000588617 NEXMIFQ5QGS0 1516 aa4.15□□□□□ -1.75
VMP1-208ENST00000588617 IFT172Q9UG01 1749 aa4.15□□□□□ -1.75
VMP1-208ENST00000588617 ADGRB1O14514 1584 aa4.14□□□□□ -1.75
VMP1-208ENST00000588617 MYO3AQ8NEV4 1616 aa4.14□□□□□ -1.75
VMP1-208ENST00000588617 NLRP1Q9C000 1473 aa4.14□□□□□ -1.75
VMP1-208ENST00000588617 A0A1W2PQD3 144 aa4.14□□□□□ -1.75
VMP1-208ENST00000588617 TMEM235A6NFC5 223 aa4.14□□□□□ -1.75
VMP1-208ENST00000588617 LEPROTO15243 131 aa4.14□□□□□ -1.75
VMP1-208ENST00000588617 S1PR2O95136 353 aa4.14□□□□□ -1.75
VMP1-208ENST00000588617 PRM2P04554 102 aa4.14□□□□□ -1.75
VMP1-208ENST00000588617 HIST1H2BOP23527 126 aa4.14□□□□□ -1.75
VMP1-208ENST00000588617 HIST1H2BBP33778 126 aa4.14□□□□□ -1.75
VMP1-208ENST00000588617 CA5AP35218 305 aa4.14□□□□□ -1.75
VMP1-208ENST00000588617 HIST1H2BDP58876 126 aa4.14□□□□□ -1.75
VMP1-208ENST00000588617 DEFA3P59666 94 aa4.14□□□□□ -1.75
VMP1-208ENST00000588617 HIST1H2BCP62807 126 aa4.14□□□□□ -1.75
VMP1-208ENST00000588617 CCL20P78556 96 aa4.14□□□□□ -1.75
VMP1-208ENST00000588617 HIST2H2BEQ16778 126 aa4.14□□□□□ -1.75
VMP1-208ENST00000588617 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.14□□□□□ -1.75
VMP1-208ENST00000588617 HIST1H2BHQ93079 126 aa4.14□□□□□ -1.75
VMP1-208ENST00000588617 TOMM6Q96B49 74 aa4.14□□□□□ -1.75
VMP1-208ENST00000588617 HIST1H2BNQ99877 126 aa4.14□□□□□ -1.75
VMP1-208ENST00000588617 HIST1H2BMQ99879 126 aa4.14□□□□□ -1.75
VMP1-208ENST00000588617 TMEM131LA2VDJ0 1609 aa4.13□□□□□ -1.75
VMP1-208ENST00000588617 RALGAPA2Q2PPJ7 1873 aa4.13□□□□□ -1.75
VMP1-208ENST00000588617 MROH2AA6NES4 1674 aa4.13□□□□□ -1.75
VMP1-208ENST00000588617 IQGAP1P46940 1657 aa4.13□□□□□ -1.75
VMP1-208ENST00000588617 PREX1Q8TCU6 1659 aa4.13□□□□□ -1.75
VMP1-208ENST00000588617 A2ML1A8K2U0 1454 aa4.13□□□□□ -1.75
VMP1-208ENST00000588617 SHANK3Q9BYB0 1731 aa4.13□□□□□ -1.75
VMP1-208ENST00000588617 GGT3PA6NGU5 568 aa4.13□□□□□ -1.75
VMP1-208ENST00000588617 H0YJX3 145 aa4.13□□□□□ -1.75
VMP1-208ENST00000588617 IGLV3-19P01714 112 aa4.13□□□□□ -1.75
VMP1-208ENST00000588617 IGLV6-57P01721 117 aa4.13□□□□□ -1.75
VMP1-208ENST00000588617 SMIM10L2AP0DMW4 78 aa4.13□□□□□ -1.75
VMP1-208ENST00000588617 SMIM10L2BP0DMW5 78 aa4.13□□□□□ -1.75
VMP1-208ENST00000588617 MIAQ16674 131 aa4.13□□□□□ -1.75
VMP1-208ENST00000588617 IBA57Q5T440 356 aaKnown RBP4.13□□□□□ -1.75
VMP1-208ENST00000588617 OR13C6PQ8NH95 151 aa4.13□□□□□ -1.75
VMP1-208ENST00000588617 TM2D3Q9BRN9 247 aa4.13□□□□□ -1.75
VMP1-208ENST00000588617 AICDAQ9GZX7 198 aa4.13□□□□□ -1.75
VMP1-208ENST00000588617 PYCARDQ9ULZ3 195 aa4.13□□□□□ -1.75
VMP1-208ENST00000588617 KIF1BO60333 1816 aa4.13□□□□□ -1.75
VMP1-208ENST00000588617 SIPA1L1O43166 1804 aa4.12□□□□□ -1.75
VMP1-208ENST00000588617 IGKV1D-43A0A0B4J1Z2 117 aa4.12□□□□□ -1.75
VMP1-208ENST00000588617 A0A1W2PNM2 257 aa4.12□□□□□ -1.75
VMP1-208ENST00000588617 TRAPPC13A5PLN9 417 aa4.12□□□□□ -1.75
VMP1-208ENST00000588617 SMIM17P0DL12 118 aa4.12□□□□□ -1.75
VMP1-208ENST00000588617 PPIBP23284 216 aaKnown RBP4.12□□□□□ -1.75
VMP1-208ENST00000588617 CRYBA4P53673 196 aa4.12□□□□□ -1.75
VMP1-208ENST00000588617 GNG3P63215 75 aa4.12□□□□□ -1.75
VMP1-208ENST00000588617 AADACL3Q5VUY0 350 aa4.12□□□□□ -1.75
VMP1-208ENST00000588617 RPL22L1Q6P5R6 122 aaKnown RBP4.12□□□□□ -1.75
VMP1-208ENST00000588617 SMIM20Q8N5G0 67 aa4.12□□□□□ -1.75
VMP1-208ENST00000588617 C20orf27Q9GZN8 174 aa4.12□□□□□ -1.75
VMP1-208ENST00000588617 TP73-AS1Q9UF72 201 aa4.12□□□□□ -1.75
VMP1-208ENST00000588617 CYSLTR1Q9Y271 337 aa4.12□□□□□ -1.75
VMP1-208ENST00000588617 PPLO60437 1756 aa4.12□□□□□ -1.75
VMP1-208ENST00000588617 DLC1Q96QB1 1528 aa4.11□□□□□ -1.75
VMP1-208ENST00000588617 IGKV2-24A0A0C4DH68 120 aa4.11□□□□□ -1.75
VMP1-208ENST00000588617 A0A1W2PNN7 141 aa4.11□□□□□ -1.75
VMP1-208ENST00000588617 C11orf86A6NJI1 115 aa4.11□□□□□ -1.75
VMP1-208ENST00000588617 G3V3Q6 166 aa4.11□□□□□ -1.75
VMP1-208ENST00000588617 IGKV1-5P01602 117 aa4.11□□□□□ -1.75
VMP1-208ENST00000588617 TFPTP0C1Z6 253 aa4.11□□□□□ -1.75
VMP1-208ENST00000588617 CD24P25063 80 aa4.11□□□□□ -1.75
VMP1-208ENST00000588617 HLA-DMBP28068 263 aa4.11□□□□□ -1.75
VMP1-208ENST00000588617 OR13C4Q8NGS5 318 aa4.11□□□□□ -1.75
VMP1-208ENST00000588617 SLC25A40Q8TBP6 338 aa4.11□□□□□ -1.75
VMP1-208ENST00000588617 GINS3Q9BRX5 216 aa4.11□□□□□ -1.75
VMP1-208ENST00000588617 PCBD2Q9H0N5 130 aa4.11□□□□□ -1.75
VMP1-208ENST00000588617 RBM7Q9Y580 266 aaKnown RBP4.11□□□□□ -1.75
VMP1-208ENST00000588617 TMEM2Q9UHN6 1383 aa4.11□□□□□ -1.75
VMP1-208ENST00000588617 TECPR2O15040 1411 aa4.11□□□□□ -1.75
VMP1-208ENST00000588617 A0A0J9YX75 114 aa4.1□□□□□ -1.75
VMP1-208ENST00000588617 BPGMP07738 259 aa4.1□□□□□ -1.75
VMP1-208ENST00000588617 ZNF728P0DKX0 622 aa4.1□□□□□ -1.75
VMP1-208ENST00000588617 SULT1A3P0DMM9 295 aa4.1□□□□□ -1.75
VMP1-208ENST00000588617 SULT1A4P0DMN0 295 aa4.1□□□□□ -1.75
VMP1-208ENST00000588617 MEF2BQ02080 365 aaPredicted RBP4.1□□□□□ -1.75
VMP1-208ENST00000588617 C3orf33Q6P1S2 294 aa4.1□□□□□ -1.75
VMP1-208ENST00000588617 IGFL3Q6UXB1 125 aa4.1□□□□□ -1.75
VMP1-208ENST00000588617 ZNF705AQ6ZN79 300 aaPredicted RBP4.1□□□□□ -1.75
VMP1-208ENST00000588617 ZNF767PQ75MW2 155 aa4.1□□□□□ -1.75
VMP1-208ENST00000588617 SMIM15Q7Z3B0 74 aa4.1□□□□□ -1.75
VMP1-208ENST00000588617 C12orf45Q8N5I9 185 aaPredicted RBP4.1□□□□□ -1.75
VMP1-208ENST00000588617 SLC7A6Q92536 515 aa4.1□□□□□ -1.75
VMP1-208ENST00000588617 GPR146Q96CH1 333 aa4.1□□□□□ -1.75
VMP1-208ENST00000588617 PKMYT1Q99640 499 aa4.1□□□□□ -1.75
VMP1-208ENST00000588617 DERL1Q9BUN8 251 aa4.1□□□□□ -1.75
VMP1-208ENST00000588617 BOLA2Q9H3K6 86 aa4.1□□□□□ -1.75
VMP1-208ENST00000588617 PARVBQ9HBI1 364 aa4.1□□□□□ -1.75
VMP1-208ENST00000588617 FAM135BQ49AJ0 1406 aa4.1□□□□□ -1.75
VMP1-208ENST00000588617 YTHDC2Q9H6S0 1430 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms