RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 ZNF833PQ6ZTB9 187 aa15.17■□□□□ 0.02
DDX39A-206ENST00000587730 PIP4P1Q86T03 277 aa15.17■□□□□ 0.02
DDX39A-206ENST00000587730 ZADH2Q8N4Q0 377 aa15.17■□□□□ 0.02
DDX39A-206ENST00000587730 DEFB124Q8NES8 71 aa15.17■□□□□ 0.02
DDX39A-206ENST00000587730 CEACAM4O75871 244 aa15.16■□□□□ 0.02
DDX39A-206ENST00000587730 GPX1P07203 203 aa15.16■□□□□ 0.02
DDX39A-206ENST00000587730 SELLP14151 372 aa15.16■□□□□ 0.02
DDX39A-206ENST00000587730 SUB1P53999 127 aaKnown RBP eCLIP15.16■□□□□ 0.02
DDX39A-206ENST00000587730 TMEM136Q6ZRR5 245 aa15.16■□□□□ 0.02
DDX39A-206ENST00000587730 FAM231DQ6ZW35 169 aa15.16■□□□□ 0.02
DDX39A-206ENST00000587730 WIPF2Q8TF74 440 aaPredicted RBP15.16■□□□□ 0.02
DDX39A-206ENST00000587730 KCNS1Q96KK3 526 aa15.16■□□□□ 0.02
DDX39A-206ENST00000587730 IGF2BP2-AS1Q96M15 143 aa15.16■□□□□ 0.02
DDX39A-206ENST00000587730 HCFC1P51610 2035 aa15.16■□□□□ 0.02
DDX39A-206ENST00000587730 USF1P22415 310 aaPredicted RBP15.15■□□□□ 0.02
DDX39A-206ENST00000587730 BPIFB3P59826 476 aa15.15■□□□□ 0.02
DDX39A-206ENST00000587730 ZNF705AQ6ZN79 300 aaPredicted RBP15.15■□□□□ 0.02
DDX39A-206ENST00000587730 ST6GALNAC3Q8NDV1 305 aa15.15■□□□□ 0.02
DDX39A-206ENST00000587730 DIDO1Q9BTC0 2240 aaKnown RBP15.15■□□□□ 0.02
DDX39A-206ENST00000587730 IZUMO1RA6ND01 250 aa15.15■□□□□ 0.02
DDX39A-206ENST00000587730 GGTLC3B5MD39 225 aa15.15■□□□□ 0.02
DDX39A-206ENST00000587730 IGHV1-46P01743 117 aa15.15■□□□□ 0.02
DDX39A-206ENST00000587730 RPLP1P05386 114 aaKnown RBP15.15■□□□□ 0.02
DDX39A-206ENST00000587730 GNG10P50151 68 aa15.15■□□□□ 0.02
DDX39A-206ENST00000587730 OR5I1Q13606 314 aa15.15■□□□□ 0.02
DDX39A-206ENST00000587730 IGF2-ASQ6U949 168 aa15.15■□□□□ 0.02
DDX39A-206ENST00000587730 SEM1Q6ZVN7 128 aa15.15■□□□□ 0.02
DDX39A-206ENST00000587730 ZNF503Q96F45 646 aa15.15■□□□□ 0.02
DDX39A-206ENST00000587730 GNB4Q9HAV0 340 aa15.15■□□□□ 0.02
DDX39A-206ENST00000587730 DNAJC4Q9NNZ3 241 aa15.15■□□□□ 0.02
DDX39A-206ENST00000587730 NDUFA4L2Q9NRX3 87 aa15.15■□□□□ 0.02
DDX39A-206ENST00000587730 SAA1P0DJI8 122 aaPredicted RBP15.14■□□□□ 0.01
DDX39A-206ENST00000587730 TMEM177Q53S58 311 aa15.14■□□□□ 0.01
DDX39A-206ENST00000587730 C8orf31Q8N9H6 132 aa15.14■□□□□ 0.01
DDX39A-206ENST00000587730 SMIM12Q96EX1 92 aa15.14■□□□□ 0.01
DDX39A-206ENST00000587730 MRPL27Q9P0M9 148 aaKnown RBP15.14■□□□□ 0.01
DDX39A-206ENST00000587730 IGKV1OR2-108A0A075B7D4 117 aa15.13■□□□□ 0.01
DDX39A-206ENST00000587730 CRYABP02511 175 aaKnown RBP15.13■□□□□ 0.01
DDX39A-206ENST00000587730 TNFRSF1AP19438 455 aa15.13■□□□□ 0.01
DDX39A-206ENST00000587730 RPL8P62917 257 aaKnown RBP15.13■□□□□ 0.01
DDX39A-206ENST00000587730 SUMO1P63165 101 aaKnown RBP15.13■□□□□ 0.01
DDX39A-206ENST00000587730 UBE2L3P68036 154 aaKnown RBP15.13■□□□□ 0.01
DDX39A-206ENST00000587730 ZNF474Q6S9Z5 364 aaPredicted RBP15.13■□□□□ 0.01
DDX39A-206ENST00000587730 C19orf35Q6ZS72 473 aa15.13■□□□□ 0.01
DDX39A-206ENST00000587730 NUP37Q8NFH4 326 aa15.13■□□□□ 0.01
DDX39A-206ENST00000587730 STXBP6Q8NFX7 210 aa15.13■□□□□ 0.01
DDX39A-206ENST00000587730 ASCL3Q9NQ33 180 aa15.13■□□□□ 0.01
DDX39A-206ENST00000587730 ZNF331Q9NQX6 463 aaPredicted RBP15.13■□□□□ 0.01
DDX39A-206ENST00000587730 NCOR2Q9Y618 2525 aa15.13■□□□□ 0.01
DDX39A-206ENST00000587730 SPRNQ5BIV9 151 aa15.13■□□□□ 0.01
DDX39A-206ENST00000587730 C1orf185Q5T7R7 199 aa15.13■□□□□ 0.01
DDX39A-206ENST00000587730 VHLLQ6RSH7 139 aa15.13■□□□□ 0.01
DDX39A-206ENST00000587730 DOLPP1Q86YN1 238 aa15.13■□□□□ 0.01
DDX39A-206ENST00000587730 HARBI1Q96MB7 349 aa15.13■□□□□ 0.01
DDX39A-206ENST00000587730 SPAARA0A1B0GVQ0 90 aa15.12■□□□□ 0.01
DDX39A-206ENST00000587730 ZNF253O75346 499 aa15.12■□□□□ 0.01
DDX39A-206ENST00000587730 IGLV2-8P01709 118 aa15.12■□□□□ 0.01
DDX39A-206ENST00000587730 IGKV1-16P04430 117 aa15.12■□□□□ 0.01
DDX39A-206ENST00000587730 IGFL3Q6UXB1 125 aa15.12■□□□□ 0.01
DDX39A-206ENST00000587730 PDPNQ86YL7 162 aa15.12■□□□□ 0.01
DDX39A-206ENST00000587730 OR5AN1Q8NGI8 311 aa15.12■□□□□ 0.01
DDX39A-206ENST00000587730 TMEM167AQ8TBQ9 72 aa15.12■□□□□ 0.01
DDX39A-206ENST00000587730 VN1R17PQ8TDU5 208 aa15.12■□□□□ 0.01
DDX39A-206ENST00000587730 CCL13Q99616 98 aa15.12■□□□□ 0.01
DDX39A-206ENST00000587730 ZNF430Q9H8G1 570 aaPredicted RBP15.12■□□□□ 0.01
DDX39A-206ENST00000587730 PSMB11A5LHX3 300 aa15.11■□□□□ 0.01
DDX39A-206ENST00000587730 COX7A2P2O60397 106 aa15.11■□□□□ 0.01
DDX39A-206ENST00000587730 APCSP02743 223 aa15.11■□□□□ 0.01
DDX39A-206ENST00000587730 GAGE1Q13065 139 aa15.11■□□□□ 0.01
DDX39A-206ENST00000587730 SSX8Q7RTT4 187 aa15.11■□□□□ 0.01
DDX39A-206ENST00000587730 TMEM190Q8WZ59 177 aa15.11■□□□□ 0.01
DDX39A-206ENST00000587730 FLYWCH2Q96CP2 140 aaKnown RBP15.11■□□□□ 0.01
DDX39A-206ENST00000587730 RNASE7Q9H1E1 156 aaKnown RBP15.11■□□□□ 0.01
DDX39A-206ENST00000587730 ASPMQ8IZT6 3477 aa15.11■□□□□ 0.01
DDX39A-206ENST00000587730 SPTBN2O15020 2390 aa15.11■□□□□ 0.01
DDX39A-206ENST00000587730 SRRM4A7MD48 611 aaKnown RBP15.1■□□□□ 0.01
DDX39A-206ENST00000587730 DIRC3C9JPN6 131 aa15.1■□□□□ 0.01
DDX39A-206ENST00000587730 ZNF324O75467 553 aaPredicted RBP15.1■□□□□ 0.01
DDX39A-206ENST00000587730 MGST1P10620 155 aaKnown RBP15.1■□□□□ 0.01
DDX39A-206ENST00000587730 AMTP48728 403 aa15.1■□□□□ 0.01
DDX39A-206ENST00000587730 UTF1Q5T230 341 aa15.1■□□□□ 0.01
DDX39A-206ENST00000587730 OR4C13Q8NGP0 309 aa15.1■□□□□ 0.01
DDX39A-206ENST00000587730 OR9G1Q8NH87 305 aa15.1■□□□□ 0.01
DDX39A-206ENST00000587730 FAM167A-AS1Q96KT0 104 aa15.1■□□□□ 0.01
DDX39A-206ENST00000587730 SLC25A2Q9BXI2 301 aa15.1■□□□□ 0.01
DDX39A-206ENST00000587730 TBL2Q9Y4P3 447 aaKnown RBP15.1■□□□□ 0.01
DDX39A-206ENST00000587730 TET2Q6N021 2002 aaPredicted RBP15.1■□□□□ 0.01
DDX39A-206ENST00000587730 H0YJW9 148 aa15.1■□□□□ 0.01
DDX39A-206ENST00000587730 MYOD1P15172 320 aa15.1■□□□□ 0.01
DDX39A-206ENST00000587730 FAM201AQ5SY85 155 aa15.1■□□□□ 0.01
DDX39A-206ENST00000587730 FAM162BQ5T6X4 162 aa15.1■□□□□ 0.01
DDX39A-206ENST00000587730 C10orf113Q5VZT2 155 aa15.1■□□□□ 0.01
DDX39A-206ENST00000587730 ETFRF1Q6IPR1 90 aa15.1■□□□□ 0.01
DDX39A-206ENST00000587730 FAM216BQ8N7L0 139 aa15.1■□□□□ 0.01
DDX39A-206ENST00000587730 GRAMD2BQ96HH9 432 aa15.1■□□□□ 0.01
DDX39A-206ENST00000587730 NRN1Q9NPD7 142 aa15.1■□□□□ 0.01
DDX39A-206ENST00000587730 SERTAD4Q9NUC0 356 aa15.1■□□□□ 0.01
DDX39A-206ENST00000587730 AMMECR1Q9Y4X0 333 aaPredicted RBP15.1■□□□□ 0.01
DDX39A-206ENST00000587730 KNTC1P50748 2209 aa15.1■□□□□ 0.01
DDX39A-206ENST00000587730 DEFB109BQ30KR1 87 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms