RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 CIB3Q96Q77 187 aaPredicted RBP14.8□□□□□ -0.04
DDX39A-204ENST00000586558 ATP6V0BQ99437 205 aa14.8□□□□□ -0.04
DDX39A-204ENST00000586558 PEF1Q9UBV8 284 aaKnown RBP14.8□□□□□ -0.04
DDX39A-204ENST00000586558 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.79□□□□□ -0.04
DDX39A-204ENST00000586558 C7orf66A4D0T2 115 aa14.79□□□□□ -0.04
DDX39A-204ENST00000586558 LINC01619G3V211 115 aa14.79□□□□□ -0.04
DDX39A-204ENST00000586558 NKX2-1P43699 371 aaPredicted RBP14.79□□□□□ -0.04
DDX39A-204ENST00000586558 ID3Q02535 119 aa14.79□□□□□ -0.04
DDX39A-204ENST00000586558 MGAM2Q2M2H8 2515 aa14.79□□□□□ -0.04
DDX39A-204ENST00000586558 C2orf83Q53S99 150 aa14.79□□□□□ -0.04
DDX39A-204ENST00000586558 LINC00482Q8N8I6 264 aa14.79□□□□□ -0.04
DDX39A-204ENST00000586558 ZBTB8BQ8NAP8 495 aaPredicted RBP14.79□□□□□ -0.04
DDX39A-204ENST00000586558 SLC24A4Q8NFF2 622 aa14.79□□□□□ -0.04
DDX39A-204ENST00000586558 MISP3Q96FF7 219 aa14.79□□□□□ -0.04
DDX39A-204ENST00000586558 OR10C1Q96KK4 312 aa14.79□□□□□ -0.04
DDX39A-204ENST00000586558 U3KQ87 197 aa14.79□□□□□ -0.04
DDX39A-204ENST00000586558 MFSD2BA6NFX1 497 aa14.78□□□□□ -0.04
DDX39A-204ENST00000586558 K7EIM0 57 aa14.78□□□□□ -0.04
DDX39A-204ENST00000586558 CCSO14618 274 aa14.78□□□□□ -0.04
DDX39A-204ENST00000586558 SYNGR2O43760 224 aa14.78□□□□□ -0.04
DDX39A-204ENST00000586558 ZP3P21754 424 aa14.78□□□□□ -0.04
DDX39A-204ENST00000586558 TATDN3Q17R31 274 aa14.78□□□□□ -0.04
DDX39A-204ENST00000586558 ZNF502Q8TBZ5 544 aa14.78□□□□□ -0.04
DDX39A-204ENST00000586558 DUX3Q96PT4 197 aa14.78□□□□□ -0.04
DDX39A-204ENST00000586558 PKD1L1Q8TDX9 2849 aa14.78□□□□□ -0.04
DDX39A-204ENST00000586558 IGHV4OR15-8A0A075B7B6 117 aa14.77□□□□□ -0.05
DDX39A-204ENST00000586558 A0A087WW49 117 aa14.77□□□□□ -0.05
DDX39A-204ENST00000586558 ANKRD34BA5PLL1 514 aa14.77□□□□□ -0.05
DDX39A-204ENST00000586558 C5orf51A6NDU8 294 aa14.77□□□□□ -0.05
DDX39A-204ENST00000586558 FAM25EA8MYX2 175 aa14.77□□□□□ -0.05
DDX39A-204ENST00000586558 NPY1RP25929 384 aa14.77□□□□□ -0.05
DDX39A-204ENST00000586558 GSG1LQ6UXU4 331 aa14.77□□□□□ -0.05
DDX39A-204ENST00000586558 WFDC9Q8NEX5 89 aa14.77□□□□□ -0.05
DDX39A-204ENST00000586558 CCDC140Q96MF4 163 aa14.77□□□□□ -0.05
DDX39A-204ENST00000586558 GSKIPQ9P0R6 139 aa14.77□□□□□ -0.05
DDX39A-204ENST00000586558 I3L2K1 104 aa14.76□□□□□ -0.05
DDX39A-204ENST00000586558 WRBO00258 174 aa14.76□□□□□ -0.05
DDX39A-204ENST00000586558 IFNA10P01566 189 aa14.76□□□□□ -0.05
DDX39A-204ENST00000586558 OXA1LQ15070 435 aa14.76□□□□□ -0.05
DDX39A-204ENST00000586558 RNASEH2CQ8TDP1 164 aaKnown RBP14.76□□□□□ -0.05
DDX39A-204ENST00000586558 SCARB1Q8WTV0 552 aa14.76□□□□□ -0.05
DDX39A-204ENST00000586558 C2orf50Q96LR7 162 aa14.76□□□□□ -0.05
DDX39A-204ENST00000586558 MAGT1Q9H0U3 335 aa14.76□□□□□ -0.05
DDX39A-204ENST00000586558 GAR1Q9NY12 217 aaKnown RBP14.76□□□□□ -0.05
DDX39A-204ENST00000586558 C21orf62Q9NYP8 219 aa14.76□□□□□ -0.05
DDX39A-204ENST00000586558 SSNA1O43805 119 aa14.75□□□□□ -0.05
DDX39A-204ENST00000586558 MT-CO2P00403 227 aa14.75□□□□□ -0.05
DDX39A-204ENST00000586558 TRBV12-3P01733 135 aa14.75□□□□□ -0.05
DDX39A-204ENST00000586558 CD33P20138 364 aa14.75□□□□□ -0.05
DDX39A-204ENST00000586558 HOXD3P31249 432 aaPredicted RBP14.75□□□□□ -0.05
DDX39A-204ENST00000586558 RPP30P78346 268 aaKnown RBP14.75□□□□□ -0.05
DDX39A-204ENST00000586558 CLEC19AQ6UXS0 136 aa14.75□□□□□ -0.05
DDX39A-204ENST00000586558 PINX1Q96BK5 328 aaKnown RBP14.75□□□□□ -0.05
DDX39A-204ENST00000586558 TXN2Q99757 166 aa14.75□□□□□ -0.05
DDX39A-204ENST00000586558 S4R3C0 116 aa14.75□□□□□ -0.05
DDX39A-204ENST00000586558 TRRAPQ9Y4A5 3859 aa14.74□□□□□ -0.05
DDX39A-204ENST00000586558 RPS10-NUDT3A0A1W2PQS6 291 aa14.74□□□□□ -0.05
DDX39A-204ENST00000586558 BMPR1BO00238 502 aa14.74□□□□□ -0.05
DDX39A-204ENST00000586558 GGCTO75223 188 aaKnown RBP14.74□□□□□ -0.05
DDX39A-204ENST00000586558 IAPPP10997 89 aa14.74□□□□□ -0.05
DDX39A-204ENST00000586558 FCGR2BP31994 310 aaPredicted RBP14.74□□□□□ -0.05
DDX39A-204ENST00000586558 MFAP4P55083 255 aa14.74□□□□□ -0.05
DDX39A-204ENST00000586558 POLR2GP62487 172 aaKnown RBP eCLIP14.74□□□□□ -0.05
DDX39A-204ENST00000586558 RAB40CQ96S21 281 aa14.74□□□□□ -0.05
DDX39A-204ENST00000586558 ALG5Q9Y673 324 aa14.74□□□□□ -0.05
DDX39A-204ENST00000586558 GOSR2O14653 212 aa14.73□□□□□ -0.05
DDX39A-204ENST00000586558 SCGB1D2O95969 90 aa14.73□□□□□ -0.05
DDX39A-204ENST00000586558 IGHV3-23P01764 117 aa14.73□□□□□ -0.05
DDX39A-204ENST00000586558 MBPP02686 304 aaPredicted RBP14.73□□□□□ -0.05
DDX39A-204ENST00000586558 CLEC3BP05452 202 aa14.73□□□□□ -0.05
DDX39A-204ENST00000586558 ARL3P36405 182 aa14.73□□□□□ -0.05
DDX39A-204ENST00000586558 OPRK1P41145 380 aa14.73□□□□□ -0.05
DDX39A-204ENST00000586558 RPEL1Q2QD12 228 aa14.73□□□□□ -0.05
DDX39A-204ENST00000586558 C11orf87Q6NUJ2 197 aa14.73□□□□□ -0.05
DDX39A-204ENST00000586558 SPSB3Q6PJ21 355 aa14.73□□□□□ -0.05
DDX39A-204ENST00000586558 TMEM170AQ8WVE7 144 aa14.73□□□□□ -0.05
DDX39A-204ENST00000586558 BSCL2Q96G97 398 aaPredicted RBP14.73□□□□□ -0.05
DDX39A-204ENST00000586558 RCC1LQ96I51 464 aaKnown RBP14.73□□□□□ -0.05
DDX39A-204ENST00000586558 MCRIP2Q9BUT9 160 aaKnown RBP14.73□□□□□ -0.05
DDX39A-204ENST00000586558 IGHV3-21A0A0B4J1V1 117 aa14.72□□□□□ -0.05
DDX39A-204ENST00000586558 SSSCA1O60232 199 aa14.72□□□□□ -0.05
DDX39A-204ENST00000586558 GPR183P32249 361 aa14.72□□□□□ -0.05
DDX39A-204ENST00000586558 SLURP1P55000 103 aa14.72□□□□□ -0.05
DDX39A-204ENST00000586558 TAS2R30P59541 319 aa14.72□□□□□ -0.05
DDX39A-204ENST00000586558 RAB11AP62491 216 aa14.72□□□□□ -0.05
DDX39A-204ENST00000586558 CYCSP99999 105 aaKnown RBP14.72□□□□□ -0.05
DDX39A-204ENST00000586558 SMIM8Q96KF7 97 aa14.72□□□□□ -0.05
DDX39A-204ENST00000586558 C15orf62A8K5M9 175 aa14.71□□□□□ -0.05
DDX39A-204ENST00000586558 PPP5D1E7EU14 171 aa14.71□□□□□ -0.05
DDX39A-204ENST00000586558 TGOLN2O43493 480 aa14.71□□□□□ -0.05
DDX39A-204ENST00000586558 IFNA4P05014 189 aa14.71□□□□□ -0.05
DDX39A-204ENST00000586558 SLC25A4P12235 298 aa14.71□□□□□ -0.05
DDX39A-204ENST00000586558 NPBWR1P48145 328 aa14.71□□□□□ -0.05
DDX39A-204ENST00000586558 IL15RAQ13261 267 aa14.71□□□□□ -0.05
DDX39A-204ENST00000586558 KLF5Q13887 457 aaPredicted RBP14.71□□□□□ -0.05
DDX39A-204ENST00000586558 Q56UQ5 140 aa14.71□□□□□ -0.05
DDX39A-204ENST00000586558 ETFRF1Q6IPR1 90 aa14.71□□□□□ -0.05
DDX39A-204ENST00000586558 ACSM6Q6P461 480 aa14.71□□□□□ -0.05
DDX39A-204ENST00000586558 DCUN1D4Q92564 292 aa14.71□□□□□ -0.05
DDX39A-204ENST00000586558 DLX4Q92988 240 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms