RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 RAB3DO95716 219 aa8.41□□□□□ -1.06
ACTN4-209ENST00000586538 MT-CO2P00403 227 aa8.41□□□□□ -1.06
ACTN4-209ENST00000586538 CD3DP04234 171 aa8.41□□□□□ -1.06
ACTN4-209ENST00000586538 HOXA1P49639 335 aaPredicted RBP8.41□□□□□ -1.06
ACTN4-209ENST00000586538 SURF2Q15527 256 aaPredicted RBP8.41□□□□□ -1.06
ACTN4-209ENST00000586538 CTF1Q16619 201 aa8.41□□□□□ -1.06
ACTN4-209ENST00000586538 Q6ZWC4 215 aa8.41□□□□□ -1.06
ACTN4-209ENST00000586538 LHFPL1Q86WI0 220 aa8.41□□□□□ -1.06
ACTN4-209ENST00000586538 STPG3Q8N7X2 389 aa8.41□□□□□ -1.06
ACTN4-209ENST00000586538 TMEM116Q8NCL8 245 aa8.41□□□□□ -1.06
ACTN4-209ENST00000586538 TERB2Q8NHR7 220 aa8.41□□□□□ -1.06
ACTN4-209ENST00000586538 PINX1Q96BK5 328 aaKnown RBP8.41□□□□□ -1.06
ACTN4-209ENST00000586538 OR10C1Q96KK4 312 aa8.41□□□□□ -1.06
ACTN4-209ENST00000586538 BCL7BQ9BQE9 202 aa8.41□□□□□ -1.06
ACTN4-209ENST00000586538 TMEM231Q9H6L2 316 aa8.41□□□□□ -1.06
ACTN4-209ENST00000586538 RETNQ9HD89 108 aa8.41□□□□□ -1.06
ACTN4-209ENST00000586538 KLK11Q9UBX7 282 aa8.41□□□□□ -1.06
ACTN4-209ENST00000586538 TRAV14DV4A0A0A6YYC5 116 aa8.4□□□□□ -1.06
ACTN4-209ENST00000586538 IGHV3-21A0A0B4J1V1 117 aa8.4□□□□□ -1.06
ACTN4-209ENST00000586538 IGHV7-4-1A0A0J9YVY3 117 aa8.4□□□□□ -1.06
ACTN4-209ENST00000586538 I3L2K1 104 aa8.4□□□□□ -1.06
ACTN4-209ENST00000586538 CD74P04233 296 aa8.4□□□□□ -1.06
ACTN4-209ENST00000586538 CTSDP07339 412 aaPredicted RBP8.4□□□□□ -1.06
ACTN4-209ENST00000586538 CTSGP08311 255 aa8.4□□□□□ -1.06
ACTN4-209ENST00000586538 ADMP35318 185 aa8.4□□□□□ -1.06
ACTN4-209ENST00000586538 PPP5CP53041 499 aa8.4□□□□□ -1.06
ACTN4-209ENST00000586538 MFAP2P55001 183 aa8.4□□□□□ -1.06
ACTN4-209ENST00000586538 SCGB2B2Q4G0G5 96 aa8.4□□□□□ -1.06
ACTN4-209ENST00000586538 RNASE12Q5GAN4 147 aaKnown RBP8.4□□□□□ -1.06
ACTN4-209ENST00000586538 STEAP1BQ6NZ63 245 aa8.4□□□□□ -1.06
ACTN4-209ENST00000586538 WFDC3Q8IUB2 231 aa8.4□□□□□ -1.06
ACTN4-209ENST00000586538 OR52I2Q8NH67 350 aa8.4□□□□□ -1.06
ACTN4-209ENST00000586538 RAB2BQ8WUD1 216 aa8.4□□□□□ -1.06
ACTN4-209ENST00000586538 GALNT14Q96FL9 552 aa8.4□□□□□ -1.06
ACTN4-209ENST00000586538 NARS2Q96I59 477 aaKnown RBP8.4□□□□□ -1.06
ACTN4-209ENST00000586538 CHRDL1Q9BU40 450 aa8.4□□□□□ -1.06
ACTN4-209ENST00000586538 NXF2Q9GZY0 626 aaKnown RBP8.4□□□□□ -1.06
ACTN4-209ENST00000586538 SMPXQ9UHP9 88 aa8.4□□□□□ -1.06
ACTN4-209ENST00000586538 RPS10-NUDT3A0A1W2PQS6 291 aa8.39□□□□□ -1.07
ACTN4-209ENST00000586538 A0A1W2PS18 150 aa8.39□□□□□ -1.07
ACTN4-209ENST00000586538 DBX1A6NMT0 343 aa8.39□□□□□ -1.07
ACTN4-209ENST00000586538 F8W735 103 aaPredicted RBP8.39□□□□□ -1.07
ACTN4-209ENST00000586538 IGKV1-39P01597 117 aa8.39□□□□□ -1.07
ACTN4-209ENST00000586538 IGKV1D-39P04432 117 aa8.39□□□□□ -1.07
ACTN4-209ENST00000586538 ATF4P18848 351 aaPredicted RBP8.39□□□□□ -1.07
ACTN4-209ENST00000586538 UCP1P25874 307 aa8.39□□□□□ -1.07
ACTN4-209ENST00000586538 DHODHQ02127 395 aa8.39□□□□□ -1.07
ACTN4-209ENST00000586538 ZNF600Q6ZNG1 722 aa8.39□□□□□ -1.07
ACTN4-209ENST00000586538 NOXA1Q86UR1 476 aa8.39□□□□□ -1.07
ACTN4-209ENST00000586538 SCGB3A2Q96PL1 93 aa8.39□□□□□ -1.07
ACTN4-209ENST00000586538 PRRT1Q99946 306 aa8.39□□□□□ -1.07
ACTN4-209ENST00000586538 RHPN1-AS1Q9BWJ2 59 aa8.39□□□□□ -1.07
ACTN4-209ENST00000586538 TRAV30A0A087WSZ9 112 aa8.38□□□□□ -1.07
ACTN4-209ENST00000586538 TEX13DA0A0J9YY54 714 aaPredicted RBP8.38□□□□□ -1.07
ACTN4-209ENST00000586538 NUPR2A6NF83 97 aa8.38□□□□□ -1.07
ACTN4-209ENST00000586538 CHEK1O14757 476 aa8.38□□□□□ -1.07
ACTN4-209ENST00000586538 SPRY2O43597 315 aa8.38□□□□□ -1.07
ACTN4-209ENST00000586538 AKAIN1P0CW23 69 aa8.38□□□□□ -1.07
ACTN4-209ENST00000586538 SMIM18P0DKX4 95 aa8.38□□□□□ -1.07
ACTN4-209ENST00000586538 OPRK1P41145 380 aa8.38□□□□□ -1.07
ACTN4-209ENST00000586538 EIF2B2P49770 351 aaKnown RBP8.38□□□□□ -1.07
ACTN4-209ENST00000586538 IL18Q14116 193 aa8.38□□□□□ -1.07
ACTN4-209ENST00000586538 OR13C8Q8NGS7 320 aa8.38□□□□□ -1.07
ACTN4-209ENST00000586538 OR52E5Q8NH55 327 aa8.38□□□□□ -1.07
ACTN4-209ENST00000586538 SMIM4Q8WVI0 70 aa8.38□□□□□ -1.07
ACTN4-209ENST00000586538 RBPMSQ93062 196 aaKnown RBP8.38□□□□□ -1.07
ACTN4-209ENST00000586538 TP53RKQ96S44 253 aa8.38□□□□□ -1.07
ACTN4-209ENST00000586538 ABHD1Q96SE0 405 aa8.38□□□□□ -1.07
ACTN4-209ENST00000586538 OVOL2Q9BRP0 275 aa8.38□□□□□ -1.07
ACTN4-209ENST00000586538 CCDC59Q9P031 241 aaKnown RBP8.38□□□□□ -1.07
ACTN4-209ENST00000586538 UBQLN2Q9UHD9 624 aa8.38□□□□□ -1.07
ACTN4-209ENST00000586538 STARD9Q9P2P6 4700 aa8.37□□□□□ -1.07
ACTN4-209ENST00000586538 TRAV2A0A0B4J234 112 aa8.37□□□□□ -1.07
ACTN4-209ENST00000586538 DNASE2O00115 360 aaPredicted RBP8.37□□□□□ -1.07
ACTN4-209ENST00000586538 CTDSPLO15194 276 aa8.37□□□□□ -1.07
ACTN4-209ENST00000586538 ST8SIA3O43173 380 aa8.37□□□□□ -1.07
ACTN4-209ENST00000586538 DFFBO76075 338 aa8.37□□□□□ -1.07
ACTN4-209ENST00000586538 PI3P19957 117 aa8.37□□□□□ -1.07
ACTN4-209ENST00000586538 HTR2BP41595 481 aa8.37□□□□□ -1.07
ACTN4-209ENST00000586538 RPL5P46777 297 aaKnown RBP8.37□□□□□ -1.07
ACTN4-209ENST00000586538 SPCS3P61009 180 aa8.37□□□□□ -1.07
ACTN4-209ENST00000586538 TNFRSF9Q07011 255 aa8.37□□□□□ -1.07
ACTN4-209ENST00000586538 GRAMD2BQ96HH9 432 aa8.37□□□□□ -1.07
ACTN4-209ENST00000586538 DIRAS2Q96HU8 199 aa8.37□□□□□ -1.07
ACTN4-209ENST00000586538 RNF2Q99496 336 aa8.37□□□□□ -1.07
ACTN4-209ENST00000586538 NAA50Q9GZZ1 169 aaKnown RBP8.37□□□□□ -1.07
ACTN4-209ENST00000586538 TMEM222Q9H0R3 208 aa8.37□□□□□ -1.07
ACTN4-209ENST00000586538 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.37□□□□□ -1.07
ACTN4-209ENST00000586538 RSL24D1Q9UHA3 163 aaKnown RBP8.37□□□□□ -1.07
ACTN4-209ENST00000586538 SCP2D1Q9UJQ7 156 aa8.37□□□□□ -1.07
ACTN4-209ENST00000586538 KCNIP3Q9Y2W7 256 aa8.37□□□□□ -1.07
ACTN4-209ENST00000586538 SELENOKQ9Y6D0 94 aa8.37□□□□□ -1.07
ACTN4-209ENST00000586538 RYR2Q92736 4967 aa8.37□□□□□ -1.07
ACTN4-209ENST00000586538 A0A0B4J293 547 aa8.36□□□□□ -1.07
ACTN4-209ENST00000586538 ZNF207O43670 478 aaKnown RBP8.36□□□□□ -1.07
ACTN4-209ENST00000586538 CDS2O95674 445 aa8.36□□□□□ -1.07
ACTN4-209ENST00000586538 IGKV1-5P01602 117 aa8.36□□□□□ -1.07
ACTN4-209ENST00000586538 P0C879 139 aa8.36□□□□□ -1.07
ACTN4-209ENST00000586538 TMBIM6P55061 237 aa8.36□□□□□ -1.07
ACTN4-209ENST00000586538 DEFB135Q30KP9 77 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms