RNA–Protein interactions for RNA: ENST00000585543.6

GFAP-205, Transcript of glial fibrillary acidic protein, humanhuman

TSL 1 (best)

Gene GFAP, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-205ENST00000585543 GSG1LQ6UXU4 331 aa12.96□□□□□ -0.33
GFAP-205ENST00000585543 ETV3LQ6ZN32 361 aa12.96□□□□□ -0.33
GFAP-205ENST00000585543 PINX1Q96BK5 328 aaKnown RBP12.96□□□□□ -0.33
GFAP-205ENST00000585543 MCRIP2Q9BUT9 160 aaKnown RBP12.96□□□□□ -0.33
GFAP-205ENST00000585543 GPR61Q9BZJ8 451 aa12.96□□□□□ -0.33
GFAP-205ENST00000585543 GAR1Q9NY12 217 aaKnown RBP12.96□□□□□ -0.33
GFAP-205ENST00000585543 IGHV4OR15-8A0A075B7B6 117 aa12.95□□□□□ -0.34
GFAP-205ENST00000585543 A0A087WW49 117 aa12.95□□□□□ -0.34
GFAP-205ENST00000585543 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.95□□□□□ -0.34
GFAP-205ENST00000585543 RPS10-NUDT3A0A1W2PQS6 291 aa12.95□□□□□ -0.34
GFAP-205ENST00000585543 SCGB2A1O75556 95 aa12.95□□□□□ -0.34
GFAP-205ENST00000585543 SCGB1D2O95969 90 aa12.95□□□□□ -0.34
GFAP-205ENST00000585543 RNASE2P10153 161 aaKnown RBP12.95□□□□□ -0.34
GFAP-205ENST00000585543 NPY1RP25929 384 aa12.95□□□□□ -0.34
GFAP-205ENST00000585543 NKX2-1P43699 371 aaPredicted RBP12.95□□□□□ -0.34
GFAP-205ENST00000585543 ATP5IP56385 69 aaPredicted RBP12.95□□□□□ -0.34
GFAP-205ENST00000585543 FHL3Q13643 280 aa12.95□□□□□ -0.34
GFAP-205ENST00000585543 RPEL1Q2QD12 228 aa12.95□□□□□ -0.34
GFAP-205ENST00000585543 LINC00482Q8N8I6 264 aa12.95□□□□□ -0.34
GFAP-205ENST00000585543 C21orf62Q9NYP8 219 aa12.95□□□□□ -0.34
GFAP-205ENST00000585543 GSKIPQ9P0R6 139 aa12.95□□□□□ -0.34
GFAP-205ENST00000585543 U3KQ87 197 aa12.95□□□□□ -0.34
GFAP-205ENST00000585543 WNK1Q9H4A3 2382 aa12.95□□□□□ -0.34
GFAP-205ENST00000585543 MFSD2BA6NFX1 497 aa12.94□□□□□ -0.34
GFAP-205ENST00000585543 SYNGR2O43760 224 aa12.94□□□□□ -0.34
GFAP-205ENST00000585543 SSNA1O43805 119 aa12.94□□□□□ -0.34
GFAP-205ENST00000585543 ARL3P36405 182 aa12.94□□□□□ -0.34
GFAP-205ENST00000585543 C2orf83Q53S99 150 aa12.94□□□□□ -0.34
GFAP-205ENST00000585543 Q56UQ5 140 aa12.94□□□□□ -0.34
GFAP-205ENST00000585543 CLEC19AQ6UXS0 136 aa12.94□□□□□ -0.34
GFAP-205ENST00000585543 ZBTB8BQ8NAP8 495 aaPredicted RBP12.94□□□□□ -0.34
GFAP-205ENST00000585543 RCC1LQ96I51 464 aaKnown RBP12.94□□□□□ -0.34
GFAP-205ENST00000585543 ATP6V0BQ99437 205 aa12.94□□□□□ -0.34
GFAP-205ENST00000585543 CCSO14618 274 aa12.93□□□□□ -0.34
GFAP-205ENST00000585543 GGCTO75223 188 aaKnown RBP12.93□□□□□ -0.34
GFAP-205ENST00000585543 MT-CO2P00403 227 aa12.93□□□□□ -0.34
GFAP-205ENST00000585543 IGHV3-23P01764 117 aa12.93□□□□□ -0.34
GFAP-205ENST00000585543 IAPPP10997 89 aa12.93□□□□□ -0.34
GFAP-205ENST00000585543 OPRK1P41145 380 aa12.93□□□□□ -0.34
GFAP-205ENST00000585543 MFAP2P55001 183 aa12.93□□□□□ -0.34
GFAP-205ENST00000585543 MFAP4P55083 255 aa12.93□□□□□ -0.34
GFAP-205ENST00000585543 RAB11AP62491 216 aa12.93□□□□□ -0.34
GFAP-205ENST00000585543 UBAC2Q8NBM4 344 aa12.93□□□□□ -0.34
GFAP-205ENST00000585543 DMRT1Q9Y5R6 373 aa12.93□□□□□ -0.34
GFAP-205ENST00000585543 S4R3C0 116 aa12.93□□□□□ -0.34
GFAP-205ENST00000585543 IGHV3-21A0A0B4J1V1 117 aa12.92□□□□□ -0.34
GFAP-205ENST00000585543 MPTX1A8MV57 137 aa12.92□□□□□ -0.34
GFAP-205ENST00000585543 OVOL1O14753 267 aa12.92□□□□□ -0.34
GFAP-205ENST00000585543 IFNA4P05014 189 aa12.92□□□□□ -0.34
GFAP-205ENST00000585543 SPNP16150 400 aa12.92□□□□□ -0.34
GFAP-205ENST00000585543 HOXD3P31249 432 aaPredicted RBP12.92□□□□□ -0.34
GFAP-205ENST00000585543 GPR183P32249 361 aa12.92□□□□□ -0.34
GFAP-205ENST00000585543 SLURP1P55000 103 aa12.92□□□□□ -0.34
GFAP-205ENST00000585543 BSXQ3C1V8 233 aa12.92□□□□□ -0.34
GFAP-205ENST00000585543 ETFRF1Q6IPR1 90 aa12.92□□□□□ -0.34
GFAP-205ENST00000585543 ACSM6Q6P461 480 aa12.92□□□□□ -0.34
GFAP-205ENST00000585543 OR4D5Q8NGN0 318 aa12.92□□□□□ -0.34
GFAP-205ENST00000585543 ZNF502Q8TBZ5 544 aa12.92□□□□□ -0.34
GFAP-205ENST00000585543 RNASEH2CQ8TDP1 164 aaKnown RBP12.92□□□□□ -0.34
GFAP-205ENST00000585543 SCARB1Q8WTV0 552 aa12.92□□□□□ -0.34
GFAP-205ENST00000585543 OR10C1Q96KK4 312 aa12.92□□□□□ -0.34
GFAP-205ENST00000585543 C2orf50Q96LR7 162 aa12.92□□□□□ -0.34
GFAP-205ENST00000585543 TXN2Q99757 166 aa12.92□□□□□ -0.34
GFAP-205ENST00000585543 MAGT1Q9H0U3 335 aa12.92□□□□□ -0.34
GFAP-205ENST00000585543 PAIP2BQ9ULR5 123 aaKnown RBP12.92□□□□□ -0.34
GFAP-205ENST00000585543 DNHD1Q96M86 4753 aa12.91□□□□□ -0.34
GFAP-205ENST00000585543 K7EIM0 57 aa12.91□□□□□ -0.34
GFAP-205ENST00000585543 GOSR2O14653 212 aa12.91□□□□□ -0.34
GFAP-205ENST00000585543 CLEC3BP05452 202 aa12.91□□□□□ -0.34
GFAP-205ENST00000585543 NPBWR1P48145 328 aa12.91□□□□□ -0.34
GFAP-205ENST00000585543 ID3Q02535 119 aa12.91□□□□□ -0.34
GFAP-205ENST00000585543 SPSB3Q6PJ21 355 aa12.91□□□□□ -0.34
GFAP-205ENST00000585543 WFDC9Q8NEX5 89 aa12.91□□□□□ -0.34
GFAP-205ENST00000585543 DCUN1D4Q92564 292 aa12.91□□□□□ -0.34
GFAP-205ENST00000585543 BSCL2Q96G97 398 aaPredicted RBP12.91□□□□□ -0.34
GFAP-205ENST00000585543 CCDC140Q96MF4 163 aa12.91□□□□□ -0.34
GFAP-205ENST00000585543 ELOVL1Q9BW60 279 aa12.91□□□□□ -0.34
GFAP-205ENST00000585543 PPP5D1E7EU14 171 aa12.9□□□□□ -0.34
GFAP-205ENST00000585543 I3L2K1 104 aa12.9□□□□□ -0.34
GFAP-205ENST00000585543 L7N2F9 121 aa12.9□□□□□ -0.34
GFAP-205ENST00000585543 SSSCA1O60232 199 aa12.9□□□□□ -0.34
GFAP-205ENST00000585543 GNG7O60262 68 aa12.9□□□□□ -0.34
GFAP-205ENST00000585543 TRBV12-3P01733 135 aa12.9□□□□□ -0.34
GFAP-205ENST00000585543 PVALBP20472 110 aaPredicted RBP12.9□□□□□ -0.34
GFAP-205ENST00000585543 VAMP2P63027 116 aa12.9□□□□□ -0.34
GFAP-205ENST00000585543 FAM106AQ4KMX7 169 aa12.9□□□□□ -0.34
GFAP-205ENST00000585543 C1QL4Q86Z23 238 aa12.9□□□□□ -0.34
GFAP-205ENST00000585543 RAB40CQ96S21 281 aa12.9□□□□□ -0.34
GFAP-205ENST00000585543 PEMTQ9UBM1 199 aa12.9□□□□□ -0.34
GFAP-205ENST00000585543 STRAPQ9Y3F4 350 aaKnown RBP12.9□□□□□ -0.34
GFAP-205ENST00000585543 OR2T8A6NH00 312 aa12.89□□□□□ -0.35
GFAP-205ENST00000585543 BMPR1BO00238 502 aa12.89□□□□□ -0.35
GFAP-205ENST00000585543 NUPL2O15504 423 aaKnown RBP12.89□□□□□ -0.35
GFAP-205ENST00000585543 TGOLN2O43493 480 aa12.89□□□□□ -0.35
GFAP-205ENST00000585543 SLC25A4P12235 298 aa12.89□□□□□ -0.35
GFAP-205ENST00000585543 POLR2GP62487 172 aaKnown RBP eCLIP12.89□□□□□ -0.35
GFAP-205ENST00000585543 CYCSP99999 105 aaKnown RBP12.89□□□□□ -0.35
GFAP-205ENST00000585543 C9orf66Q5T8R8 295 aa12.89□□□□□ -0.35
GFAP-205ENST00000585543 PVRIGQ6DKI7 326 aa12.89□□□□□ -0.35
GFAP-205ENST00000585543 DLX4Q92988 240 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms