RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 SOX15O60248 233 aa12.64□□□□□ -0.39
SS18-226ENST00000585241 CST7O76096 145 aa12.64□□□□□ -0.39
SS18-226ENST00000585241 NDUFA7O95182 113 aa12.64□□□□□ -0.39
SS18-226ENST00000585241 TMEM95Q3KNT9 176 aa12.64□□□□□ -0.39
SS18-226ENST00000585241 OR10P1Q8NGE3 313 aa12.64□□□□□ -0.39
SS18-226ENST00000585241 PINX1Q96BK5 328 aaKnown RBP12.64□□□□□ -0.39
SS18-226ENST00000585241 BSCL2Q96G97 398 aaPredicted RBP12.64□□□□□ -0.39
SS18-226ENST00000585241 NOL4LQ96MY1 436 aaPredicted RBP12.64□□□□□ -0.39
SS18-226ENST00000585241 GGACTQ9BVM4 153 aa12.64□□□□□ -0.39
SS18-226ENST00000585241 GON7Q9BXV9 100 aa12.64□□□□□ -0.39
SS18-226ENST00000585241 TEP1Q99973 2627 aaKnown RBP12.63□□□□□ -0.39
SS18-226ENST00000585241 TRBV9A0A0B4J1U6 114 aa12.63□□□□□ -0.39
SS18-226ENST00000585241 FNDC10F2Z333 226 aa12.63□□□□□ -0.39
SS18-226ENST00000585241 IFNA4P05014 189 aa12.63□□□□□ -0.39
SS18-226ENST00000585241 CRYBA1P05813 215 aa12.63□□□□□ -0.39
SS18-226ENST00000585241 HIST1H1BP16401 226 aaKnown RBP12.63□□□□□ -0.39
SS18-226ENST00000585241 S100A11P31949 105 aa12.63□□□□□ -0.39
SS18-226ENST00000585241 HBG1P69891 147 aa12.63□□□□□ -0.39
SS18-226ENST00000585241 HBG2P69892 147 aa12.63□□□□□ -0.39
SS18-226ENST00000585241 DLK1P80370 383 aa12.63□□□□□ -0.39
SS18-226ENST00000585241 EXOSC2Q13868 293 aaKnown RBP12.63□□□□□ -0.39
SS18-226ENST00000585241 OR5T1Q8NG75 326 aa12.63□□□□□ -0.39
SS18-226ENST00000585241 OR2T6Q8NHC8 308 aa12.63□□□□□ -0.39
SS18-226ENST00000585241 FBXL17Q9UF56 701 aa12.63□□□□□ -0.39
SS18-226ENST00000585241 LINC00527Q9UJ94 153 aa12.63□□□□□ -0.39
SS18-226ENST00000585241 PAIP2BQ9ULR5 123 aaKnown RBP12.63□□□□□ -0.39
SS18-226ENST00000585241 TMEM89A2RUT3 159 aa12.62□□□□□ -0.39
SS18-226ENST00000585241 TAAR5O14804 337 aa12.62□□□□□ -0.39
SS18-226ENST00000585241 CYB5BO43169 146 aa12.62□□□□□ -0.39
SS18-226ENST00000585241 IGLV1-40P01703 118 aa12.62□□□□□ -0.39
SS18-226ENST00000585241 IGHG4P01861 327 aa12.62□□□□□ -0.39
SS18-226ENST00000585241 DEFA4P12838 97 aa12.62□□□□□ -0.39
SS18-226ENST00000585241 GPX4P36969 197 aaPredicted RBP12.62□□□□□ -0.39
SS18-226ENST00000585241 CD69Q07108 199 aa12.62□□□□□ -0.39
SS18-226ENST00000585241 SLC38A11Q08AI6 406 aa12.62□□□□□ -0.39
SS18-226ENST00000585241 ATP6V1FQ16864 119 aa12.62□□□□□ -0.39
SS18-226ENST00000585241 VWC2Q2TAL6 325 aa12.62□□□□□ -0.39
SS18-226ENST00000585241 OR8G2PQ6IF36 304 aa12.62□□□□□ -0.39
SS18-226ENST00000585241 TMUB2Q71RG4 321 aa12.62□□□□□ -0.39
SS18-226ENST00000585241 TMEM217Q8N7C4 229 aa12.62□□□□□ -0.39
SS18-226ENST00000585241 OR1S2Q8NGQ3 325 aa12.62□□□□□ -0.39
SS18-226ENST00000585241 OR5C1Q8NGR4 320 aa12.62□□□□□ -0.39
SS18-226ENST00000585241 CACNG8Q8WXS5 425 aa12.62□□□□□ -0.39
SS18-226ENST00000585241 FNDC4Q9H6D8 234 aaPredicted RBP12.62□□□□□ -0.39
SS18-226ENST00000585241 ZC4H2Q9NQZ6 224 aa12.62□□□□□ -0.39
SS18-226ENST00000585241 I3L2K1 104 aa12.61□□□□□ -0.39
SS18-226ENST00000585241 K7EIM0 57 aa12.61□□□□□ -0.39
SS18-226ENST00000585241 BCL2L11O43521 198 aa12.61□□□□□ -0.39
SS18-226ENST00000585241 AP2S1P53680 142 aaPredicted RBP12.61□□□□□ -0.39
SS18-226ENST00000585241 SLC25A24Q6NUK1 477 aa12.61□□□□□ -0.39
SS18-226ENST00000585241 ARPC5LQ9BPX5 153 aa12.61□□□□□ -0.39
SS18-226ENST00000585241 TMEM147Q9BVK8 224 aa12.61□□□□□ -0.39
SS18-226ENST00000585241 ARL6Q9H0F7 186 aa12.61□□□□□ -0.39
SS18-226ENST00000585241 CUBNO60494 3623 aa12.6□□□□□ -0.39
SS18-226ENST00000585241 RPS10-NUDT3A0A1W2PQS6 291 aa12.6□□□□□ -0.39
SS18-226ENST00000585241 DFFBO76075 338 aa12.6□□□□□ -0.39
SS18-226ENST00000585241 PRH1P02810 166 aa12.6□□□□□ -0.39
SS18-226ENST00000585241 ARSJQ5FYB0 599 aaPredicted RBP12.6□□□□□ -0.39
SS18-226ENST00000585241 SLC16A13Q7RTY0 426 aa12.6□□□□□ -0.39
SS18-226ENST00000585241 WIPF2Q8TF74 440 aaPredicted RBP12.6□□□□□ -0.39
SS18-226ENST00000585241 MISP3Q96FF7 219 aa12.6□□□□□ -0.39
SS18-226ENST00000585241 ATP5SQ99766 215 aa12.6□□□□□ -0.39
SS18-226ENST00000585241 WFDC1Q9HC57 220 aa12.6□□□□□ -0.39
SS18-226ENST00000585241 CYTL1Q9NRR1 136 aa12.6□□□□□ -0.39
SS18-226ENST00000585241 THYN1Q9P016 225 aa12.6□□□□□ -0.39
SS18-226ENST00000585241 C2CD3Q4AC94 2353 aa12.6□□□□□ -0.39
SS18-226ENST00000585241 KANTRA0A1W2PQU2 76 aa12.59□□□□□ -0.39
SS18-226ENST00000585241 MT-CO2P00403 227 aa12.59□□□□□ -0.39
SS18-226ENST00000585241 C4BPBP20851 252 aa12.59□□□□□ -0.39
SS18-226ENST00000585241 PSMB8P28062 276 aa12.59□□□□□ -0.39
SS18-226ENST00000585241 OPRK1P41145 380 aa12.59□□□□□ -0.39
SS18-226ENST00000585241 SLC35B1P78383 322 aa12.59□□□□□ -0.39
SS18-226ENST00000585241 ETFRF1Q6IPR1 90 aa12.59□□□□□ -0.39
SS18-226ENST00000585241 LILRB2Q8N423 598 aa12.59□□□□□ -0.39
SS18-226ENST00000585241 RNF152Q8N8N0 203 aa12.59□□□□□ -0.39
SS18-226ENST00000585241 NECAP1Q8NC96 275 aa12.59□□□□□ -0.39
SS18-226ENST00000585241 PARD6GQ9BYG4 376 aaPredicted RBP12.59□□□□□ -0.39
SS18-226ENST00000585241 SMIM3Q9BZL3 60 aa12.59□□□□□ -0.39
SS18-226ENST00000585241 SLA2Q9H6Q3 261 aa12.59□□□□□ -0.39
SS18-226ENST00000585241 PSMB11A5LHX3 300 aa12.58□□□□□ -0.4
SS18-226ENST00000585241 FAM223BA6NKX1 122 aa12.58□□□□□ -0.4
SS18-226ENST00000585241 ELANEP08246 267 aa12.58□□□□□ -0.4
SS18-226ENST00000585241 MDKP21741 143 aaPredicted RBP12.58□□□□□ -0.4
SS18-226ENST00000585241 RHOGP84095 191 aa12.58□□□□□ -0.4
SS18-226ENST00000585241 FOXE3Q13461 319 aa12.58□□□□□ -0.4
SS18-226ENST00000585241 ZNF266Q14584 549 aa12.58□□□□□ -0.4
SS18-226ENST00000585241 CLINT1Q14677 625 aa12.58□□□□□ -0.4
SS18-226ENST00000585241 OPCMLQ14982 345 aa12.58□□□□□ -0.4
SS18-226ENST00000585241 MLANAQ16655 118 aa12.58□□□□□ -0.4
SS18-226ENST00000585241 FAM223AQ8IWN6 122 aa12.58□□□□□ -0.4
SS18-226ENST00000585241 COMMD1Q8N668 190 aa12.58□□□□□ -0.4
SS18-226ENST00000585241 TMEM116Q8NCL8 245 aa12.58□□□□□ -0.4
SS18-226ENST00000585241 LINC01006Q8NI28 216 aa12.58□□□□□ -0.4
SS18-226ENST00000585241 MYOZ3Q8TDC0 251 aa12.58□□□□□ -0.4
SS18-226ENST00000585241 VN1R17PQ8TDU5 208 aa12.58□□□□□ -0.4
SS18-226ENST00000585241 TAF15Q92804 592 aaKnown RBP eCLIP12.58□□□□□ -0.4
SS18-226ENST00000585241 UQCC1Q9NVA1 299 aa12.58□□□□□ -0.4
SS18-226ENST00000585241 FBXL7Q9UJT9 491 aa12.58□□□□□ -0.4
SS18-226ENST00000585241 OR2J3O76001 311 aa12.57□□□□□ -0.4
SS18-226ENST00000585241 NDUFB8O95169 186 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms