RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 BAZ2BQ9UIF8 2168 aaKnown RBP0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 HEATR1Q9H583 2144 aaKnown RBP0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 FANCMQ8IYD8 2048 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 SCN8AQ9UQD0 1980 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 ANKRD31Q8N7Z5 1873 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 NUP210Q8TEM1 1887 aaPredicted RBP0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 CUL9Q8IWT3 2517 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 PCF11O94913 1555 aaKnown RBP0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 NCAPD3P42695 1498 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 FMN1Q68DA7 1419 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 NINQ8N4C6 2090 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 EIF3AQ14152 1382 aaKnown RBP0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 MTUS2Q5JR59 1369 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 TONSLQ96HA7 1378 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 PTPRFP10586 1907 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 TRAV9-1A0A075B6T8 112 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 TRAV7A0A075B6U4 112 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 IGKV2-40A0A087WW87 121 aaPredicted RBP0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 TRAV38-1A0A0B4J264 116 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 IGHV1-18A0A0C4DH31 117 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 A0A0D9SG52 128 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 A0A0J9YY10 115 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 TRBV10-2A0A0K0K1G8 114 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 A0A1B0GX78 115 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 DPRXA6NFQ7 191 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 GGT3PA6NGU5 568 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 H7C2G1 150 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 PIRO00625 290 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 LEPROTO15243 131 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 SULT1B1O43704 296 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 ATP5HO75947 161 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 CRYZL1O95825 349 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 IGKV2D-40P01614 121 aaPredicted RBP0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 IGHV3-7P01780 117 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 TCRBP04435 133 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 PRM2P04554 102 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 IFNA6P05013 189 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 REG1AP05451 166 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 COX6A1P12074 109 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 PPIBP23284 216 aaKnown RBP0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 RPL5P46777 297 aaKnown RBP0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 ZNF80P51504 273 aaPredicted RBP0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 AQP4P55087 323 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 RAB14P61106 215 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 ERVS71-1P61550 626 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 LSM6P62312 80 aaKnown RBP0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 RPL30P62888 115 aaKnown RBP0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 CTAG1AP78358 180 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 RPL18Q07020 188 aaKnown RBP0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 AESQ08117 197 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 CDK10Q15131 360 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 TEX36Q5VZQ5 186 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 ZNF705AQ6ZN79 300 aaPredicted RBP0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 TRAPPC6BQ86SZ2 158 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 RPS19BP1Q86WX3 136 aaKnown RBP0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 KRT222Q8N1A0 295 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 GDPD1Q8N9F7 314 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 OR8B12Q8NGG6 310 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 OR4D11Q8NGI4 311 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 SGMS2Q8NHU3 365 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 RASSF5Q8WWW0 418 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 C11orf40Q8WZ69 217 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 TOMM6Q96B49 74 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 C2orf50Q96LR7 162 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 Q96M85 177 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 PRAP1Q96NZ9 151 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 SCGB3A1Q96QR1 104 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 TSPAN32Q96QS1 320 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 NIPSNAP1Q9BPW8 284 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 PAIP2Q9BPZ3 127 aaKnown RBP0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 KIFC1Q9BW19 673 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 CCDC90BQ9GZT6 254 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 DCSTAMPQ9H295 470 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 VCX3BQ9H321 246 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 CXorf21Q9HAI6 301 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 PARVBQ9HBI1 364 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 PAQR5Q9NXK6 330 aaPredicted RBP0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 MRPL27Q9P0M9 148 aaKnown RBP0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 CKLFQ9UBR5 152 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 STOML2Q9UJZ1 356 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 FBXO5Q9UKT4 447 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 COQ4Q9Y3A0 265 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 ARL5AQ9Y689 179 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 SDK1Q7Z5N4 2213 aa0.49□□□□□ -2.33
SMCHD1-206ENST00000581631 ZFC3H1O60293 1989 aaKnown RBP0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 KIAA1549Q9HCM3 1950 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 SCAF11Q99590 1463 aaKnown RBP0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 FBN2P35556 2912 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 ZFYVE9O95405 1425 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 WRNQ14191 1432 aaPredicted RBP eCLIP0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 ROCK1Q13464 1354 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 TNRC6BQ9UPQ9 1833 aaKnown RBP0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 ARHGEF28Q8N1W1 1705 aaKnown RBP0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 TRAV26-2A0A0B4J265 109 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 IGKV3D-7A0A0C4DH55 119 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 IGKV3OR2-268A0A0C4DH90 116 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 EXOC1LA0A1B0GW35 172 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 hADV38S2A0JD32 116 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 MEIS3P1A6NDR6 274 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 OR51F1A6NGY5 319 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms