RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 HERV-K104P61576 105 aa7.17□□□□□ -1.26
RFFL-208ENST00000581039 C12orf74Q32Q52 190 aa7.17□□□□□ -1.26
RFFL-208ENST00000581039 SOHLH1Q5JUK2 328 aa7.17□□□□□ -1.26
RFFL-208ENST00000581039 TOMM20LQ6UXN7 152 aa7.17□□□□□ -1.26
RFFL-208ENST00000581039 ZNF767PQ75MW2 155 aa7.17□□□□□ -1.26
RFFL-208ENST00000581039 ZNF367Q7RTV3 350 aa7.17□□□□□ -1.26
RFFL-208ENST00000581039 TRPT1Q86TN4 253 aaKnown RBP7.17□□□□□ -1.26
RFFL-208ENST00000581039 CADM3Q8N126 398 aa7.17□□□□□ -1.26
RFFL-208ENST00000581039 FAM24BQ8N5W8 94 aa7.17□□□□□ -1.26
RFFL-208ENST00000581039 PINX1Q96BK5 328 aaKnown RBP7.17□□□□□ -1.26
RFFL-208ENST00000581039 TMEM231Q9H6L2 316 aa7.17□□□□□ -1.26
RFFL-208ENST00000581039 TMEM14BQ9NUH8 114 aa7.17□□□□□ -1.26
RFFL-208ENST00000581039 NDUFB11Q9NX14 153 aa7.17□□□□□ -1.26
RFFL-208ENST00000581039 PLA2G2EQ9NZK7 142 aa7.17□□□□□ -1.26
RFFL-208ENST00000581039 DAPK2Q9UIK4 370 aa7.17□□□□□ -1.26
RFFL-208ENST00000581039 TBC1D24Q9ULP9 559 aa7.17□□□□□ -1.26
RFFL-208ENST00000581039 X6R8D5 127 aa7.17□□□□□ -1.26
RFFL-208ENST00000581039 A0A1W2PS18 150 aa7.16□□□□□ -1.26
RFFL-208ENST00000581039 PGLYRP1O75594 196 aaPredicted RBP7.16□□□□□ -1.26
RFFL-208ENST00000581039 MT-CO2P00403 227 aa7.16□□□□□ -1.26
RFFL-208ENST00000581039 RLN1P04808 185 aa7.16□□□□□ -1.26
RFFL-208ENST00000581039 FCER2P06734 321 aa7.16□□□□□ -1.26
RFFL-208ENST00000581039 GNRHRP30968 328 aa7.16□□□□□ -1.26
RFFL-208ENST00000581039 UBE2UQ5VVX9 321 aa7.16□□□□□ -1.26
RFFL-208ENST00000581039 ZNF575Q86XF7 245 aa7.16□□□□□ -1.26
RFFL-208ENST00000581039 OR5AP2Q8NGF4 316 aa7.16□□□□□ -1.26
RFFL-208ENST00000581039 FCAMRQ8WWV6 532 aa7.16□□□□□ -1.26
RFFL-208ENST00000581039 MOB3AQ96BX8 217 aa7.16□□□□□ -1.26
RFFL-208ENST00000581039 TSC22D3Q99576 134 aa7.16□□□□□ -1.26
RFFL-208ENST00000581039 RHBDL2Q9NX52 303 aa7.16□□□□□ -1.26
RFFL-208ENST00000581039 CLEC5AQ9NY25 188 aa7.16□□□□□ -1.26
RFFL-208ENST00000581039 IGLV2-18A0A075B6J9 118 aa7.15□□□□□ -1.26
RFFL-208ENST00000581039 KNCNA6PVL3 124 aa7.15□□□□□ -1.26
RFFL-208ENST00000581039 C4BPBP20851 252 aa7.15□□□□□ -1.26
RFFL-208ENST00000581039 NPPCP23582 126 aa7.15□□□□□ -1.26
RFFL-208ENST00000581039 NPBWR1P48145 328 aa7.15□□□□□ -1.26
RFFL-208ENST00000581039 TBCEQ15813 527 aaPredicted RBP7.15□□□□□ -1.26
RFFL-208ENST00000581039 ACTL10Q5JWF8 245 aa7.15□□□□□ -1.26
RFFL-208ENST00000581039 ZNF600Q6ZNG1 722 aa7.15□□□□□ -1.26
RFFL-208ENST00000581039 UBE2DNLQ8IWF7 75 aa7.15□□□□□ -1.26
RFFL-208ENST00000581039 CMTM1Q8IZ96 169 aa7.15□□□□□ -1.26
RFFL-208ENST00000581039 STXBP6Q8NFX7 210 aa7.15□□□□□ -1.26
RFFL-208ENST00000581039 LGALS14Q8TCE9 139 aa7.15□□□□□ -1.26
RFFL-208ENST00000581039 GRAMD2BQ96HH9 432 aa7.15□□□□□ -1.26
RFFL-208ENST00000581039 CELA1Q9UNI1 258 aa7.15□□□□□ -1.26
RFFL-208ENST00000581039 RRP15Q9Y3B9 282 aaKnown RBP7.15□□□□□ -1.26
RFFL-208ENST00000581039 PUS1Q9Y606 427 aaKnown RBP eCLIP7.15□□□□□ -1.26
RFFL-208ENST00000581039 PKD1P98161 4303 aa7.14□□□□□ -1.27
RFFL-208ENST00000581039 DBX1A6NMT0 343 aa7.14□□□□□ -1.27
RFFL-208ENST00000581039 K7EQG2 157 aa7.14□□□□□ -1.27
RFFL-208ENST00000581039 CBX5P45973 191 aa7.14□□□□□ -1.27
RFFL-208ENST00000581039 ERHP84090 104 aaKnown RBP7.14□□□□□ -1.27
RFFL-208ENST00000581039 DHRS11Q6UWP2 260 aa7.14□□□□□ -1.27
RFFL-208ENST00000581039 ZNF114Q8NC26 417 aa7.14□□□□□ -1.27
RFFL-208ENST00000581039 CSNK1G2-AS1Q8NCQ2 148 aa7.14□□□□□ -1.27
RFFL-208ENST00000581039 OR4A16Q8NH70 328 aa7.14□□□□□ -1.27
RFFL-208ENST00000581039 SCRT1Q9BWW7 348 aa7.14□□□□□ -1.27
RFFL-208ENST00000581039 A0A0A6YYH2 397 aa7.13□□□□□ -1.27
RFFL-208ENST00000581039 A6NJ64 397 aa7.13□□□□□ -1.27
RFFL-208ENST00000581039 TMEM50AO95807 157 aa7.13□□□□□ -1.27
RFFL-208ENST00000581039 ZNF688P0C7X2 276 aa7.13□□□□□ -1.27
RFFL-208ENST00000581039 FGF9P31371 208 aaPredicted RBP7.13□□□□□ -1.27
RFFL-208ENST00000581039 AQP4P55087 323 aa7.13□□□□□ -1.27
RFFL-208ENST00000581039 NUTF2P61970 127 aaKnown RBP7.13□□□□□ -1.27
RFFL-208ENST00000581039 PRCDQ00LT1 54 aa7.13□□□□□ -1.27
RFFL-208ENST00000581039 C1orf134Q5TEV5 83 aa7.13□□□□□ -1.27
RFFL-208ENST00000581039 SFXN4Q6P4A7 337 aa7.13□□□□□ -1.27
RFFL-208ENST00000581039 Q6ZR54 194 aa7.13□□□□□ -1.27
RFFL-208ENST00000581039 H2BFWTQ7Z2G1 175 aa7.13□□□□□ -1.27
RFFL-208ENST00000581039 NARS2Q96I59 477 aaKnown RBP7.13□□□□□ -1.27
RFFL-208ENST00000581039 METTL26Q96S19 204 aa7.13□□□□□ -1.27
RFFL-208ENST00000581039 RAB40CQ96S21 281 aa7.13□□□□□ -1.27
RFFL-208ENST00000581039 ZNF2Q9BSG1 426 aaPredicted RBP7.13□□□□□ -1.27
RFFL-208ENST00000581039 C1QTNF4Q9BXJ3 329 aa7.13□□□□□ -1.27
RFFL-208ENST00000581039 AUNIPQ9H7T9 357 aa7.13□□□□□ -1.27
RFFL-208ENST00000581039 ZFAND3Q9H8U3 227 aa7.13□□□□□ -1.27
RFFL-208ENST00000581039 DIABLOQ9NR28 239 aa7.13□□□□□ -1.27
RFFL-208ENST00000581039 TXNL4BQ9NX01 149 aaKnown RBP7.13□□□□□ -1.27
RFFL-208ENST00000581039 EHFQ9NZC4 300 aa7.13□□□□□ -1.27
RFFL-208ENST00000581039 A0A1B0GU03 582 aa7.12□□□□□ -1.27
RFFL-208ENST00000581039 MEIS3P1A6NDR6 274 aa7.12□□□□□ -1.27
RFFL-208ENST00000581039 GPR31O00270 319 aa7.12□□□□□ -1.27
RFFL-208ENST00000581039 CD74P04233 296 aa7.12□□□□□ -1.27
RFFL-208ENST00000581039 SPART-AS1P0CW21 52 aa7.12□□□□□ -1.27
RFFL-208ENST00000581039 SNCAP37840 140 aa7.12□□□□□ -1.27
RFFL-208ENST00000581039 P2RY1P47900 373 aa7.12□□□□□ -1.27
RFFL-208ENST00000581039 RFX2P48378 723 aa7.12□□□□□ -1.27
RFFL-208ENST00000581039 EIF2B2P49770 351 aaKnown RBP7.12□□□□□ -1.27
RFFL-208ENST00000581039 SCAND1P57086 179 aa7.12□□□□□ -1.27
RFFL-208ENST00000581039 HSPE1P61604 102 aaKnown RBP7.12□□□□□ -1.27
RFFL-208ENST00000581039 Q6ZRM9 215 aa7.12□□□□□ -1.27
RFFL-208ENST00000581039 OR5H6Q8NGV6 325 aa7.12□□□□□ -1.27
RFFL-208ENST00000581039 TMEM230Q96A57 120 aa7.12□□□□□ -1.27
RFFL-208ENST00000581039 FAM210BQ96KR6 192 aa7.12□□□□□ -1.27
RFFL-208ENST00000581039 IFT46Q9NQC8 304 aa7.12□□□□□ -1.27
RFFL-208ENST00000581039 BLOC1S6Q9UL45 172 aa7.12□□□□□ -1.27
RFFL-208ENST00000581039 AGRNO00468 2067 aa7.12□□□□□ -1.27
RFFL-208ENST00000581039 SCGB2A1O75556 95 aa7.11□□□□□ -1.27
RFFL-208ENST00000581039 PMP2P02689 132 aa7.11□□□□□ -1.27
RFFL-208ENST00000581039 CRYBB3P26998 211 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms