RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 ZMAT4Q9H898 229 aa12.55□□□□□ -0.4
SREBF1-219ENST00000580540 MLXQ9UH92 298 aa12.55□□□□□ -0.4
SREBF1-219ENST00000580540 CRYM-AS1A6NIL9 109 aa12.54□□□□□ -0.4
SREBF1-219ENST00000580540 SCAF4O95104 1147 aaKnown RBP12.54□□□□□ -0.4
SREBF1-219ENST00000580540 CDS2O95674 445 aa12.54□□□□□ -0.4
SREBF1-219ENST00000580540 CD7P09564 240 aa12.54□□□□□ -0.4
SREBF1-219ENST00000580540 AKR1C4P17516 323 aa12.54□□□□□ -0.4
SREBF1-219ENST00000580540 TMEM268Q5VZI3 342 aa12.54□□□□□ -0.4
SREBF1-219ENST00000580540 SELENOHQ8IZQ5 122 aaKnown RBP12.54□□□□□ -0.4
SREBF1-219ENST00000580540 ZNF114Q8NC26 417 aa12.54□□□□□ -0.4
SREBF1-219ENST00000580540 LHFPL5Q8TAF8 219 aa12.54□□□□□ -0.4
SREBF1-219ENST00000580540 TMEM190Q8WZ59 177 aa12.54□□□□□ -0.4
SREBF1-219ENST00000580540 RBPMSQ93062 196 aaKnown RBP12.54□□□□□ -0.4
SREBF1-219ENST00000580540 RCHY1Q96PM5 261 aa12.54□□□□□ -0.4
SREBF1-219ENST00000580540 RBM38Q9H0Z9 239 aaKnown RBP12.54□□□□□ -0.4
SREBF1-219ENST00000580540 C19orf73Q9NVV2 129 aa12.54□□□□□ -0.4
SREBF1-219ENST00000580540 KCNIP3Q9Y2W7 256 aa12.54□□□□□ -0.4
SREBF1-219ENST00000580540 F8W735 103 aaPredicted RBP12.53□□□□□ -0.4
SREBF1-219ENST00000580540 I3L2K1 104 aa12.53□□□□□ -0.4
SREBF1-219ENST00000580540 NUPL2O15504 423 aaKnown RBP12.53□□□□□ -0.4
SREBF1-219ENST00000580540 ZNF207O43670 478 aaKnown RBP12.53□□□□□ -0.4
SREBF1-219ENST00000580540 ADMP35318 185 aa12.53□□□□□ -0.4
SREBF1-219ENST00000580540 FAUP35544 74 aaKnown RBP12.53□□□□□ -0.4
SREBF1-219ENST00000580540 SUB1P53999 127 aaKnown RBP eCLIP12.53□□□□□ -0.48e-8■■□□□ 11.8
SREBF1-219ENST00000580540 ELLP55199 621 aaPredicted RBP12.53□□□□□ -0.4
SREBF1-219ENST00000580540 Q6ZRM9 215 aa12.53□□□□□ -0.4
SREBF1-219ENST00000580540 RBPMS2Q6ZRY4 209 aaKnown RBP12.53□□□□□ -0.4
SREBF1-219ENST00000580540 FAM219AQ8IW50 185 aa12.53□□□□□ -0.4
SREBF1-219ENST00000580540 TMEM61Q8N0U2 210 aa12.53□□□□□ -0.4
SREBF1-219ENST00000580540 TOMM5Q8N4H5 51 aa12.53□□□□□ -0.4
SREBF1-219ENST00000580540 MARC2Q969Z3 335 aa12.53□□□□□ -0.4
SREBF1-219ENST00000580540 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.53□□□□□ -0.4
SREBF1-219ENST00000580540 GAR1Q9NY12 217 aaKnown RBP12.53□□□□□ -0.4
SREBF1-219ENST00000580540 PRR13Q9NZ81 148 aa12.53□□□□□ -0.4
SREBF1-219ENST00000580540 MRPL27Q9P0M9 148 aaKnown RBP12.53□□□□□ -0.4
SREBF1-219ENST00000580540 V9GYH0 126 aa12.53□□□□□ -0.4
SREBF1-219ENST00000580540 A8MZ25 164 aa12.52□□□□□ -0.41
SREBF1-219ENST00000580540 NDUFA4O00483 81 aa12.52□□□□□ -0.41
SREBF1-219ENST00000580540 YIF1AO95070 293 aa12.52□□□□□ -0.41
SREBF1-219ENST00000580540 CTSGP08311 255 aa12.52□□□□□ -0.41
SREBF1-219ENST00000580540 AP3S2P59780 193 aa12.52□□□□□ -0.41
SREBF1-219ENST00000580540 DEFB125Q8N687 156 aa12.52□□□□□ -0.41
SREBF1-219ENST00000580540 TMEM230Q96A57 120 aa12.52□□□□□ -0.41
SREBF1-219ENST00000580540 GPR146Q96CH1 333 aa12.52□□□□□ -0.41
SREBF1-219ENST00000580540 ATP6V0BQ99437 205 aa12.52□□□□□ -0.41
SREBF1-219ENST00000580540 CACNG5Q9UF02 275 aa12.52□□□□□ -0.41
SREBF1-219ENST00000580540 OR11H12B2RN74 326 aa12.51□□□□□ -0.41
SREBF1-219ENST00000580540 GNG7O60262 68 aa12.51□□□□□ -0.41
SREBF1-219ENST00000580540 NXPH3O95157 252 aa12.51□□□□□ -0.41
SREBF1-219ENST00000580540 C8orf88P0DMB2 117 aa12.51□□□□□ -0.41
SREBF1-219ENST00000580540 SPCS3P61009 180 aa12.51□□□□□ -0.41
SREBF1-219ENST00000580540 RELQ04864 619 aaPredicted RBP12.51□□□□□ -0.41
SREBF1-219ENST00000580540 KLF9Q13886 244 aaPredicted RBP12.51□□□□□ -0.41
SREBF1-219ENST00000580540 ZNF79Q15937 498 aa12.51□□□□□ -0.41
SREBF1-219ENST00000580540 SLC16A13Q7RTY0 426 aa12.51□□□□□ -0.41
SREBF1-219ENST00000580540 OR52B4Q8NGK2 314 aa12.51□□□□□ -0.41
SREBF1-219ENST00000580540 WFDC10AQ9H1F0 79 aa12.51□□□□□ -0.41
SREBF1-219ENST00000580540 DAZ1Q9NQZ3 744 aaKnown RBP12.51□□□□□ -0.41
SREBF1-219ENST00000580540 CEBPZOSA8MTT3 80 aa12.5□□□□□ -0.41
SREBF1-219ENST00000580540 ZNF701M0R085 212 aaPredicted RBP12.5□□□□□ -0.41
SREBF1-219ENST00000580540 RNASE2P10153 161 aaKnown RBP12.5□□□□□ -0.41
SREBF1-219ENST00000580540 TMEM187Q14656 261 aa12.5□□□□□ -0.41
SREBF1-219ENST00000580540 HAGHQ16775 308 aa12.5□□□□□ -0.41
SREBF1-219ENST00000580540 SPANXN2Q5MJ10 180 aa12.5□□□□□ -0.41
SREBF1-219ENST00000580540 TMED4Q7Z7H5 227 aa12.5□□□□□ -0.41
SREBF1-219ENST00000580540 CCDC190Q86UF4 302 aa12.5□□□□□ -0.41
SREBF1-219ENST00000580540 DUSP18Q8NEJ0 188 aa12.5□□□□□ -0.41
SREBF1-219ENST00000580540 TRIM63Q969Q1 353 aa12.5□□□□□ -0.41
SREBF1-219ENST00000580540 TXN2Q99757 166 aa12.5□□□□□ -0.41
SREBF1-219ENST00000580540 HEYLQ9NQ87 328 aaPredicted RBP12.5□□□□□ -0.41
SREBF1-219ENST00000580540 TMEM56-RWDD3S4R434 201 aa12.5□□□□□ -0.41
SREBF1-219ENST00000580540 INS-IGF2F8WCM5 200 aa12.49□□□□□ -0.41
SREBF1-219ENST00000580540 ANXA3P12429 323 aa12.49□□□□□ -0.41
SREBF1-219ENST00000580540 NPBWR1P48145 328 aa12.49□□□□□ -0.41
SREBF1-219ENST00000580540 ANKRD55Q3KP44 614 aa12.49□□□□□ -0.41
SREBF1-219ENST00000580540 TM2D3Q9BRN9 247 aa12.49□□□□□ -0.41
SREBF1-219ENST00000580540 SRD5A3Q9H8P0 318 aa12.49□□□□□ -0.41
SREBF1-219ENST00000580540 IGHV3-49A0A0A0MS15 119 aa12.48□□□□□ -0.41
SREBF1-219ENST00000580540 TRAV25A0A0B4J276 109 aa12.48□□□□□ -0.41
SREBF1-219ENST00000580540 CORTO00230 105 aa12.48□□□□□ -0.41
SREBF1-219ENST00000580540 SULT1A3P0DMM9 295 aa12.48□□□□□ -0.41
SREBF1-219ENST00000580540 SULT1A4P0DMN0 295 aa12.48□□□□□ -0.41
SREBF1-219ENST00000580540 FCGR2BP31994 310 aaPredicted RBP12.48□□□□□ -0.41
SREBF1-219ENST00000580540 OPRK1P41145 380 aa12.48□□□□□ -0.41
SREBF1-219ENST00000580540 INPP1P49441 399 aa12.48□□□□□ -0.41
SREBF1-219ENST00000580540 LAMTOR1Q6IAA8 161 aa12.48□□□□□ -0.41
SREBF1-219ENST00000580540 OR52E5Q8NH55 327 aa12.48□□□□□ -0.41
SREBF1-219ENST00000580540 GALNT14Q96FL9 552 aa12.48□□□□□ -0.41
SREBF1-219ENST00000580540 C15orf62A8K5M9 175 aa12.47□□□□□ -0.41
SREBF1-219ENST00000580540 K7EMT4 169 aa12.47□□□□□ -0.41
SREBF1-219ENST00000580540 SUPT4H1P63272 117 aaKnown RBP12.47□□□□□ -0.41
SREBF1-219ENST00000580540 MLANAQ16655 118 aa12.47□□□□□ -0.41
SREBF1-219ENST00000580540 LYZL2Q7Z4W2 148 aa12.47□□□□□ -0.41
SREBF1-219ENST00000580540 LGI3Q8N145 548 aa12.47□□□□□ -0.41
SREBF1-219ENST00000580540 IL22RA2Q969J5 263 aa12.47□□□□□ -0.41
SREBF1-219ENST00000580540 SPATA25Q9BR10 227 aa12.47□□□□□ -0.41
SREBF1-219ENST00000580540 IGHV3OR16-13A0A075B7E8 117 aa12.46□□□□□ -0.41
SREBF1-219ENST00000580540 IGHV3-74A0A0B4J1X5 117 aa12.46□□□□□ -0.41
SREBF1-219ENST00000580540 RBMY1BA6NDE4 496 aaKnown RBP12.46□□□□□ -0.41
SREBF1-219ENST00000580540 RBMY1EA6NEQ0 496 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms