RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 CENPXA8MT69 81 aa10.06□□□□□ -0.8
TRAF4-214ENST00000580073 PPP5D1E7EU14 171 aa10.06□□□□□ -0.8
TRAF4-214ENST00000580073 PRH1P02810 166 aa10.06□□□□□ -0.8
TRAF4-214ENST00000580073 TCRBP04435 133 aa10.06□□□□□ -0.8
TRAF4-214ENST00000580073 RBMY1DP0C7P1 496 aaKnown RBP10.06□□□□□ -0.8
TRAF4-214ENST00000580073 ERVK-16P61578 105 aa10.06□□□□□ -0.8
TRAF4-214ENST00000580073 TMEM128Q5BJH2 165 aa10.06□□□□□ -0.8
TRAF4-214ENST00000580073 TMEM268Q5VZI3 342 aa10.06□□□□□ -0.8
TRAF4-214ENST00000580073 LYZL2Q7Z4W2 148 aa10.06□□□□□ -0.8
TRAF4-214ENST00000580073 CENPSQ8N2Z9 138 aa10.06□□□□□ -0.8
TRAF4-214ENST00000580073 MARC2Q969Z3 335 aa10.06□□□□□ -0.8
TRAF4-214ENST00000580073 CXorf58Q96LI9 332 aa10.06□□□□□ -0.8
TRAF4-214ENST00000580073 QTRT1Q9BXR0 403 aaKnown RBP10.06□□□□□ -0.8
TRAF4-214ENST00000580073 TMEM14BQ9NUH8 114 aa10.06□□□□□ -0.8
TRAF4-214ENST00000580073 LOC102724200A0A096LPH7 203 aaPredicted RBP10.05□□□□□ -0.8
TRAF4-214ENST00000580073 TRBV7-1A0A0A6YYK4 115 aa10.05□□□□□ -0.8
TRAF4-214ENST00000580073 C15orf61A6NNL5 157 aa10.05□□□□□ -0.8
TRAF4-214ENST00000580073 ZNF785A8K8V0 405 aa10.05□□□□□ -0.8
TRAF4-214ENST00000580073 B3GALNT1O75752 331 aa10.05□□□□□ -0.8
TRAF4-214ENST00000580073 SFT2D2O95562 160 aa10.05□□□□□ -0.8
TRAF4-214ENST00000580073 REG1AP05451 166 aa10.05□□□□□ -0.8
TRAF4-214ENST00000580073 WT1-ASQ06250 92 aa10.05□□□□□ -0.8
TRAF4-214ENST00000580073 H2BFWTQ7Z2G1 175 aa10.05□□□□□ -0.8
TRAF4-214ENST00000580073 SLC35G3Q8N808 338 aa10.05□□□□□ -0.8
TRAF4-214ENST00000580073 RBPMSQ93062 196 aaKnown RBP10.05□□□□□ -0.8
TRAF4-214ENST00000580073 WDR89Q96FK6 387 aaPredicted RBP10.05□□□□□ -0.8
TRAF4-214ENST00000580073 C20orf85Q9H1P6 137 aa10.05□□□□□ -0.8
TRAF4-214ENST00000580073 NDUFA4L2Q9NRX3 87 aa10.05□□□□□ -0.8
TRAF4-214ENST00000580073 THYN1Q9P016 225 aa10.05□□□□□ -0.8
TRAF4-214ENST00000580073 OR51B2Q9Y5P1 312 aa10.05□□□□□ -0.8
TRAF4-214ENST00000580073 DMRT1Q9Y5R6 373 aa10.05□□□□□ -0.8
TRAF4-214ENST00000580073 TRAV6A0A075B6T7 132 aa10.04□□□□□ -0.8
TRAF4-214ENST00000580073 TRAV25A0A0B4J276 109 aa10.04□□□□□ -0.8
TRAF4-214ENST00000580073 ZNF320A2RRD8 509 aa10.04□□□□□ -0.8
TRAF4-214ENST00000580073 C9orf170A2RU37 121 aa10.04□□□□□ -0.8
TRAF4-214ENST00000580073 FGF2P09038 288 aa10.04□□□□□ -0.8
TRAF4-214ENST00000580073 DEFA4P12838 97 aa10.04□□□□□ -0.8
TRAF4-214ENST00000580073 CBLN1P23435 193 aa10.04□□□□□ -0.8
TRAF4-214ENST00000580073 APOC4P55056 127 aa10.04□□□□□ -0.8
TRAF4-214ENST00000580073 SPINK9Q5DT21 86 aa10.04□□□□□ -0.8
TRAF4-214ENST00000580073 NMSQ5H8A3 153 aa10.04□□□□□ -0.8
TRAF4-214ENST00000580073 RBPMS2Q6ZRY4 209 aaKnown RBP10.04□□□□□ -0.8
TRAF4-214ENST00000580073 TMEM61Q8N0U2 210 aa10.04□□□□□ -0.8
TRAF4-214ENST00000580073 FANCD2OSQ96PS1 177 aa10.04□□□□□ -0.8
TRAF4-214ENST00000580073 WFDC10AQ9H1F0 79 aa10.04□□□□□ -0.8
TRAF4-214ENST00000580073 KCNIP3Q9Y2W7 256 aa10.04□□□□□ -0.8
TRAF4-214ENST00000580073 ALMS1Q8TCU4 4167 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 HYDINQ4G0P3 5121 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 ST8SIA3O43173 380 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 SNAPC5O75971 98 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 CRYGCP07315 174 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 OR4E1P0C645 316 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 TRAPPC2P0DI81 140 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 TRAPPC2BP0DI82 140 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 CTRB1P17538 263 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 VAMP1P23763 118 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 PSMB6P28072 239 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 AKR1C2P52895 323 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 MFAP2P55001 183 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 CTRB2Q6GPI1 263 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 THOC7Q6I9Y2 204 aaKnown RBP10.03□□□□□ -0.8
TRAF4-214ENST00000580073 CLEC19AQ6UXS0 136 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 NRARPQ7Z6K4 114 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 TMEM217Q8N7C4 229 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 LRTM2Q8N967 370 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 OR1L6Q8NGR2 347 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 OR1L8Q8NGR8 309 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 LINC00476Q8WZB0 136 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 IL22RA2Q969J5 263 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 COMMD5Q9GZQ3 224 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 NUDT15Q9NV35 164 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 PRNDQ9UKY0 176 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 TP53TG1Q9Y2A0 90 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 UFC1Q9Y3C8 167 aa10.03□□□□□ -0.8
TRAF4-214ENST00000580073 A0A0B4J2A0 478 aa10.02□□□□□ -0.81
TRAF4-214ENST00000580073 CXorf65A6NEN9 183 aa10.02□□□□□ -0.81
TRAF4-214ENST00000580073 OR2C1O95371 312 aa10.02□□□□□ -0.81
TRAF4-214ENST00000580073 ELLP55199 621 aaPredicted RBP10.02□□□□□ -0.81
TRAF4-214ENST00000580073 UBE2MP61081 183 aaKnown RBP10.02□□□□□ -0.81
TRAF4-214ENST00000580073 HSPE1P61604 102 aaKnown RBP10.02□□□□□ -0.81
TRAF4-214ENST00000580073 DHRS2Q13268 280 aa10.02□□□□□ -0.81
TRAF4-214ENST00000580073 KLK9Q2XQG4 91 aa10.02□□□□□ -0.81
TRAF4-214ENST00000580073 AARDQ4LEZ3 155 aa10.02□□□□□ -0.81
TRAF4-214ENST00000580073 LYG2Q86SG7 212 aa10.02□□□□□ -0.81
TRAF4-214ENST00000580073 LGI3Q8N145 548 aa10.02□□□□□ -0.81
TRAF4-214ENST00000580073 OR4A16Q8NH70 328 aa10.02□□□□□ -0.81
TRAF4-214ENST00000580073 LSM10Q969L4 123 aaKnown RBP10.02□□□□□ -0.81
TRAF4-214ENST00000580073 CCDC140Q96MF4 163 aa10.02□□□□□ -0.81
TRAF4-214ENST00000580073 TSC22D3Q99576 134 aa10.02□□□□□ -0.81
TRAF4-214ENST00000580073 SRSF8Q9BRL6 282 aaKnown RBP10.02□□□□□ -0.81
TRAF4-214ENST00000580073 SEC22CQ9BRL7 303 aa10.02□□□□□ -0.81
TRAF4-214ENST00000580073 HINT2Q9BX68 163 aa10.02□□□□□ -0.81
TRAF4-214ENST00000580073 CACNG5Q9UF02 275 aa10.02□□□□□ -0.81
TRAF4-214ENST00000580073 SHPKQ9UHJ6 478 aa10.02□□□□□ -0.81
TRAF4-214ENST00000580073 KLK9Q9UKQ9 250 aa10.02□□□□□ -0.81
TRAF4-214ENST00000580073 FAM240BA0A1B0GVZ2 78 aa10.01□□□□□ -0.81
TRAF4-214ENST00000580073 TMEM213A2RRL7 107 aa10.01□□□□□ -0.81
TRAF4-214ENST00000580073 MPTX1A8MV57 137 aa10.01□□□□□ -0.81
TRAF4-214ENST00000580073 UBE2CO00762 179 aa10.01□□□□□ -0.81
TRAF4-214ENST00000580073 ADAP1O75689 374 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms