RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 SPINK9Q5DT21 86 aa11.8□□□□□ -0.52
CRLF3-203ENST00000578692 TMEM116Q8NCL8 245 aa11.8□□□□□ -0.52
CRLF3-203ENST00000578692 OR10C1Q96KK4 312 aa11.8□□□□□ -0.52
CRLF3-203ENST00000578692 NXF2Q9GZY0 626 aaKnown RBP11.8□□□□□ -0.52
CRLF3-203ENST00000578692 MIXL1Q9H2W2 232 aa11.8□□□□□ -0.52
CRLF3-203ENST00000578692 COPZ2Q9P299 210 aa11.8□□□□□ -0.52
CRLF3-203ENST00000578692 RYR2Q92736 4967 aa11.8□□□□□ -0.52
CRLF3-203ENST00000578692 A0A0B4J293 547 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 IGHV7-4-1A0A0J9YVY3 117 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 GABARAPH6UMI1 98 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 CHEK1O14757 476 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 RAB3DO95716 219 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 IFNA17P01571 189 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 APOC4P55056 127 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 ODF3L2Q3SX64 289 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 SP6Q3SY56 376 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 SCGB2B2Q4G0G5 96 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 STEAP1BQ6NZ63 245 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 GPR141Q7Z602 305 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 CCDC71LQ8N9Z2 235 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 RNF2Q99496 336 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 RHPN1-AS1Q9BWJ2 59 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 MRPS26Q9BYN8 205 aaKnown RBP11.79□□□□□ -0.52
CRLF3-203ENST00000578692 LYSTQ99698 3801 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 TRAV14DV4A0A0A6YYC5 116 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 INS-IGF2F8WCM5 200 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 CTDSP2O14595 271 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 ST8SIA3O43173 380 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 P0C879 139 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 ALDH3B2P48448 385 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 TRIM16LQ309B1 348 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 SLC35G3Q8N808 338 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 DUSP18Q8NEJ0 188 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 OR13C8Q8NGS7 320 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 MARCH1Q8TCQ1 289 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 PDCD10Q9BUL8 212 aa11.79□□□□□ -0.52
CRLF3-203ENST00000578692 IGHV3-49A0A0A0MS15 119 aa11.78□□□□□ -0.52
CRLF3-203ENST00000578692 UBE2CO00762 179 aa11.78□□□□□ -0.52
CRLF3-203ENST00000578692 UCP1P25874 307 aa11.78□□□□□ -0.52
CRLF3-203ENST00000578692 ETV6P41212 452 aa11.78□□□□□ -0.52
CRLF3-203ENST00000578692 NPBWR1P48145 328 aa11.78□□□□□ -0.52
CRLF3-203ENST00000578692 MRPS10P82664 201 aaKnown RBP11.78□□□□□ -0.52
CRLF3-203ENST00000578692 SSBP1Q04837 148 aaKnown RBP11.78□□□□□ -0.52
CRLF3-203ENST00000578692 Q6ZWC4 215 aa11.78□□□□□ -0.52
CRLF3-203ENST00000578692 WFDC3Q8IUB2 231 aa11.78□□□□□ -0.52
CRLF3-203ENST00000578692 RRNAD1Q96FB5 475 aaKnown RBP11.78□□□□□ -0.52
CRLF3-203ENST00000578692 TP53TG1Q9Y2A0 90 aa11.78□□□□□ -0.52
CRLF3-203ENST00000578692 KIR2DL5BA0A0G2JN68 375 aa11.77□□□□□ -0.53
CRLF3-203ENST00000578692 KIR2DL5BA0A0G2JPC4 375 aa11.77□□□□□ -0.53
CRLF3-203ENST00000578692 SPRY2O43597 315 aa11.77□□□□□ -0.53
CRLF3-203ENST00000578692 B3GALNT1O75752 331 aa11.77□□□□□ -0.53
CRLF3-203ENST00000578692 JTBO76095 146 aa11.77□□□□□ -0.53
CRLF3-203ENST00000578692 SUB1P53999 127 aaKnown RBP eCLIP11.77□□□□□ -0.53
CRLF3-203ENST00000578692 CMC4P56277 68 aaPredicted RBP11.77□□□□□ -0.53
CRLF3-203ENST00000578692 SPCS2Q15005 226 aa11.77□□□□□ -0.53
CRLF3-203ENST00000578692 KIR2DL5AQ8N109 375 aa11.77□□□□□ -0.53
CRLF3-203ENST00000578692 STPG3Q8N7X2 389 aa11.77□□□□□ -0.53
CRLF3-203ENST00000578692 KIR2DL5BQ8NHK3 375 aa11.77□□□□□ -0.53
CRLF3-203ENST00000578692 GALNT14Q96FL9 552 aa11.77□□□□□ -0.53
CRLF3-203ENST00000578692 IGKV3-7A0A075B6H7 116 aa11.76□□□□□ -0.53
CRLF3-203ENST00000578692 IGHV3OR16-13A0A075B7E8 117 aa11.76□□□□□ -0.53
CRLF3-203ENST00000578692 IGHV3-74A0A0B4J1X5 117 aa11.76□□□□□ -0.53
CRLF3-203ENST00000578692 A0A0G2JRQ6 117 aa11.76□□□□□ -0.53
CRLF3-203ENST00000578692 CORTO00230 105 aa11.76□□□□□ -0.53
CRLF3-203ENST00000578692 TMEM50AO95807 157 aa11.76□□□□□ -0.53
CRLF3-203ENST00000578692 RPL35AP18077 110 aaKnown RBP11.76□□□□□ -0.53
CRLF3-203ENST00000578692 BMI1P35226 326 aa11.76□□□□□ -0.53
CRLF3-203ENST00000578692 MEF2DQ14814 521 aa11.76□□□□□ -0.53
CRLF3-203ENST00000578692 FAM90A2PQ658T7 463 aa11.76□□□□□ -0.53
CRLF3-203ENST00000578692 PVRIGQ6DKI7 326 aa11.76□□□□□ -0.53
CRLF3-203ENST00000578692 TOMM20LQ6UXN7 152 aa11.76□□□□□ -0.53
CRLF3-203ENST00000578692 RNASE11Q8TAA1 199 aaKnown RBP11.76□□□□□ -0.53
CRLF3-203ENST00000578692 GINS3Q9BRX5 216 aa11.76□□□□□ -0.53
CRLF3-203ENST00000578692 ENY2Q9NPA8 101 aa11.76□□□□□ -0.53
CRLF3-203ENST00000578692 C14orf166Q9Y224 244 aaKnown RBP11.76□□□□□ -0.53
CRLF3-203ENST00000578692 DISC1C4P0D8 188 aa11.75□□□□□ -0.53
CRLF3-203ENST00000578692 CDS2O95674 445 aa11.75□□□□□ -0.53
CRLF3-203ENST00000578692 RNASE2P10153 161 aaKnown RBP11.75□□□□□ -0.53
CRLF3-203ENST00000578692 TFPI2P48307 235 aa11.75□□□□□ -0.53
CRLF3-203ENST00000578692 HOXA1P49639 335 aaPredicted RBP11.75□□□□□ -0.53
CRLF3-203ENST00000578692 DEFB135Q30KP9 77 aa11.75□□□□□ -0.53
CRLF3-203ENST00000578692 FAAP20Q6NZ36 180 aa11.75□□□□□ -0.53
CRLF3-203ENST00000578692 ZNF600Q6ZNG1 722 aa11.75□□□□□ -0.53
CRLF3-203ENST00000578692 Q6ZRM9 215 aa11.75□□□□□ -0.53
CRLF3-203ENST00000578692 CLVS1Q8IUQ0 354 aaPredicted RBP11.75□□□□□ -0.53
CRLF3-203ENST00000578692 APRG1Q8IVJ8 170 aa11.75□□□□□ -0.53
CRLF3-203ENST00000578692 DIRAS2Q96HU8 199 aa11.75□□□□□ -0.53
CRLF3-203ENST00000578692 RTBDNQ9BSG5 229 aaPredicted RBP11.75□□□□□ -0.53
CRLF3-203ENST00000578692 TMEM222Q9H0R3 208 aa11.75□□□□□ -0.53
CRLF3-203ENST00000578692 MAP6D1Q9H9H5 199 aa11.75□□□□□ -0.53
CRLF3-203ENST00000578692 A0A0J9YWU9 116 aa11.74□□□□□ -0.53
CRLF3-203ENST00000578692 TEX13DA0A0J9YY54 714 aaPredicted RBP11.74□□□□□ -0.53
CRLF3-203ENST00000578692 CTDSPLO15194 276 aa11.74□□□□□ -0.53
CRLF3-203ENST00000578692 CD5P06127 495 aa11.74□□□□□ -0.53
CRLF3-203ENST00000578692 OR5AC1P0C628 307 aa11.74□□□□□ -0.53
CRLF3-203ENST00000578692 PAFAH1B2P68402 229 aa11.74□□□□□ -0.53
CRLF3-203ENST00000578692 IL18Q14116 193 aa11.74□□□□□ -0.53
CRLF3-203ENST00000578692 SURF2Q15527 256 aaPredicted RBP11.74□□□□□ -0.53
CRLF3-203ENST00000578692 MLANAQ16655 118 aa11.74□□□□□ -0.53
CRLF3-203ENST00000578692 TCF24Q7RTU0 167 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms