RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 SSX2Q16385 188 aa22.14■■□□□ 1.14
LIMD2-203ENST00000578067 ZNF843Q8N446 348 aa22.14■■□□□ 1.14
LIMD2-203ENST00000578067 ABHD5Q8WTS1 349 aa22.14■■□□□ 1.14
LIMD2-203ENST00000578067 FNDC4Q9H6D8 234 aaPredicted RBP22.14■■□□□ 1.14
LIMD2-203ENST00000578067 TOX4O94842 621 aa22.14■■□□□ 1.13
LIMD2-203ENST00000578067 LGALS4P56470 323 aa22.14■■□□□ 1.13
LIMD2-203ENST00000578067 RHOBP62745 196 aa22.14■■□□□ 1.13
LIMD2-203ENST00000578067 PVRIGQ6DKI7 326 aa22.14■■□□□ 1.13
LIMD2-203ENST00000578067 TVP23CQ96ET8 276 aa22.14■■□□□ 1.13
LIMD2-203ENST00000578067 ACY3Q96HD9 319 aa22.14■■□□□ 1.13
LIMD2-203ENST00000578067 FCN1O00602 326 aa22.13■■□□□ 1.13
LIMD2-203ENST00000578067 NDUFS6O75380 124 aaKnown RBP22.13■■□□□ 1.13
LIMD2-203ENST00000578067 FOXH1O75593 365 aa22.13■■□□□ 1.13
LIMD2-203ENST00000578067 AREGP15514 252 aa22.13■■□□□ 1.13
LIMD2-203ENST00000578067 NBR2O15453 112 aa22.13■■□□□ 1.13
LIMD2-203ENST00000578067 PAGE4O60829 102 aa22.13■■□□□ 1.13
LIMD2-203ENST00000578067 CXorf1O96002 111 aa22.13■■□□□ 1.13
LIMD2-203ENST00000578067 PAX6P26367 422 aa22.13■■□□□ 1.13
LIMD2-203ENST00000578067 NPBQ8NG41 125 aa22.13■■□□□ 1.13
LIMD2-203ENST00000578067 TEX22C9J3V5 150 aa22.12■■□□□ 1.13
LIMD2-203ENST00000578067 ATF4P18848 351 aaPredicted RBP22.12■■□□□ 1.13
LIMD2-203ENST00000578067 SSBP2P81877 361 aaPredicted RBP22.12■■□□□ 1.13
LIMD2-203ENST00000578067 EAF1Q96JC9 268 aaPredicted RBP22.12■■□□□ 1.13
LIMD2-203ENST00000578067 SEPSECSQ9HD40 501 aaKnown RBP22.12■■□□□ 1.13
LIMD2-203ENST00000578067 ARL14EPLP0DKL9 152 aa22.11■■□□□ 1.13
LIMD2-203ENST00000578067 SRSF12Q8WXF0 261 aaKnown RBP22.11■■□□□ 1.13
LIMD2-203ENST00000578067 SPNS3Q6ZMD2 512 aa22.11■■□□□ 1.13
LIMD2-203ENST00000578067 DYNAPQ8N1N2 210 aa22.11■■□□□ 1.13
LIMD2-203ENST00000578067 OR2T10Q8NGZ9 312 aa22.11■■□□□ 1.13
LIMD2-203ENST00000578067 FAM168AQ92567 244 aa22.11■■□□□ 1.13
LIMD2-203ENST00000578067 TBX15Q96SF7 602 aa22.11■■□□□ 1.13
LIMD2-203ENST00000578067 PIMREGQ9BSJ6 248 aa22.11■■□□□ 1.13
LIMD2-203ENST00000578067 DOPEY1Q5JWR5 2465 aa22.1■■□□□ 1.13
LIMD2-203ENST00000578067 TMEM250H0YL14 139 aa22.1■■□□□ 1.13
LIMD2-203ENST00000578067 NDUFA3O95167 84 aa22.1■■□□□ 1.13
LIMD2-203ENST00000578067 APELAP0DMC3 54 aa22.1■■□□□ 1.13
LIMD2-203ENST00000578067 CD24P25063 80 aa22.1■■□□□ 1.13
LIMD2-203ENST00000578067 HES1Q14469 280 aa22.1■■□□□ 1.13
LIMD2-203ENST00000578067 ETFRF1Q6IPR1 90 aa22.1■■□□□ 1.13
LIMD2-203ENST00000578067 OR1P1Q8NH06 330 aa22.1■■□□□ 1.13
LIMD2-203ENST00000578067 OR4F5Q8NH21 305 aa22.1■■□□□ 1.13
LIMD2-203ENST00000578067 OR4F4Q96R69 305 aa22.1■■□□□ 1.13
LIMD2-203ENST00000578067 UBE2E1P51965 193 aa22.09■■□□□ 1.13
LIMD2-203ENST00000578067 TUBA4BQ9H853 241 aa22.09■■□□□ 1.13
LIMD2-203ENST00000578067 TBL2Q9Y4P3 447 aaKnown RBP22.09■■□□□ 1.13
LIMD2-203ENST00000578067 GATA2P23769 480 aaPredicted RBP22.09■■□□□ 1.13
LIMD2-203ENST00000578067 MFAP2P55001 183 aa22.09■■□□□ 1.13
LIMD2-203ENST00000578067 SPATA31B1PQ5VZV4 182 aa22.09■■□□□ 1.13
LIMD2-203ENST00000578067 CYP2G1PQ6ZSU1 146 aa22.09■■□□□ 1.13
LIMD2-203ENST00000578067 NANPQ8TBE9 248 aa22.09■■□□□ 1.13
LIMD2-203ENST00000578067 NPIPB3Q92617 1050 aa22.09■■□□□ 1.13
LIMD2-203ENST00000578067 SRSF8Q9BRL6 282 aaKnown RBP22.09■■□□□ 1.13
LIMD2-203ENST00000578067 MISP3Q96FF7 219 aa22.08■■□□□ 1.13
LIMD2-203ENST00000578067 C19orf24Q9BVV8 132 aa22.08■■□□□ 1.13
LIMD2-203ENST00000578067 POLR3KQ9Y2Y1 108 aaPredicted RBP22.08■■□□□ 1.13
LIMD2-203ENST00000578067 CNIH1O95406 144 aa22.07■■□□□ 1.12
LIMD2-203ENST00000578067 MT-CO2P00403 227 aa22.07■■□□□ 1.12
LIMD2-203ENST00000578067 FAM78BQ5VT40 261 aa22.07■■□□□ 1.12
LIMD2-203ENST00000578067 THAP8Q8NA92 274 aa22.07■■□□□ 1.12
LIMD2-203ENST00000578067 C10orf105Q8TEF2 133 aa22.07■■□□□ 1.12
LIMD2-203ENST00000578067 C17orf50Q8WW18 174 aa22.07■■□□□ 1.12
LIMD2-203ENST00000578067 F11RQ9Y624 299 aaKnown RBP22.07■■□□□ 1.12
LIMD2-203ENST00000578067 ZNF727A8MUV8 499 aa22.07■■□□□ 1.12
LIMD2-203ENST00000578067 C11orf94C9JXX5 98 aa22.07■■□□□ 1.12
LIMD2-203ENST00000578067 NDUFS8O00217 210 aa22.07■■□□□ 1.12
LIMD2-203ENST00000578067 CORTO00230 105 aa22.07■■□□□ 1.12
LIMD2-203ENST00000578067 CRYGCP07315 174 aa22.07■■□□□ 1.12
LIMD2-203ENST00000578067 C15orf54Q8N8G6 183 aa22.07■■□□□ 1.12
LIMD2-203ENST00000578067 FUT9Q9Y231 359 aa22.07■■□□□ 1.12
LIMD2-203ENST00000578067 COLCA2A8K830 154 aa22.06■■□□□ 1.12
LIMD2-203ENST00000578067 IGHV3-48P01763 117 aa22.06■■□□□ 1.12
LIMD2-203ENST00000578067 MRPL36Q9P0J6 103 aaKnown RBP22.06■■□□□ 1.12
LIMD2-203ENST00000578067 ATP5J2P56134 94 aa22.06■■□□□ 1.12
LIMD2-203ENST00000578067 UBE2G2P60604 165 aa22.06■■□□□ 1.12
LIMD2-203ENST00000578067 PNRC1Q12796 327 aaPredicted RBP22.06■■□□□ 1.12
LIMD2-203ENST00000578067 EBI3Q14213 229 aa22.06■■□□□ 1.12
LIMD2-203ENST00000578067 C19orf35Q6ZS72 473 aa22.06■■□□□ 1.12
LIMD2-203ENST00000578067 MALSU1Q96EH3 234 aa22.06■■□□□ 1.12
LIMD2-203ENST00000578067 PLXNB1O43157 2135 aa22.05■■□□□ 1.12
LIMD2-203ENST00000578067 GCHFRP30047 84 aa22.05■■□□□ 1.12
LIMD2-203ENST00000578067 RND2P52198 227 aa22.05■■□□□ 1.12
LIMD2-203ENST00000578067 C5orf64Q2M2E5 130 aa22.05■■□□□ 1.12
LIMD2-203ENST00000578067 FBLN7Q53RD9 439 aa22.05■■□□□ 1.12
LIMD2-203ENST00000578067 MIR17HGQ75NE6 70 aa22.05■■□□□ 1.12
LIMD2-203ENST00000578067 A0A087WWC5 75 aa22.04■■□□□ 1.12
LIMD2-203ENST00000578067 LOC105371267A0A1B0GV96 52 aa22.04■■□□□ 1.12
LIMD2-203ENST00000578067 TCRBV4S1A1TA0A5B7 111 aa22.04■■□□□ 1.12
LIMD2-203ENST00000578067 CLEC2AQ6UVW9 174 aa22.04■■□□□ 1.12
LIMD2-203ENST00000578067 SMIM7Q9BQ49 75 aa22.04■■□□□ 1.12
LIMD2-203ENST00000578067 SLC25A33Q9BSK2 321 aa22.04■■□□□ 1.12
LIMD2-203ENST00000578067 LPAR2Q9HBW0 351 aa22.04■■□□□ 1.12
LIMD2-203ENST00000578067 SDF2L1Q9HCN8 221 aa22.04■■□□□ 1.12
LIMD2-203ENST00000578067 TACC2O95359 2948 aa22.04■■□□□ 1.12
LIMD2-203ENST00000578067 NAV3Q8IVL0 2385 aa22.04■■□□□ 1.12
LIMD2-203ENST00000578067 IGKV1D-37A0A075B6S9 117 aa22.04■■□□□ 1.12
LIMD2-203ENST00000578067 VWC2LB2RUY7 222 aa22.04■■□□□ 1.12
LIMD2-203ENST00000578067 CST9LP1Q5W188 147 aa22.04■■□□□ 1.12
LIMD2-203ENST00000578067 Q8N6K4 173 aa22.04■■□□□ 1.12
LIMD2-203ENST00000578067 B4DEV8 164 aa22.03■■□□□ 1.12
LIMD2-203ENST00000578067 OR5G3P0C626 314 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms