RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 OR52B4Q8NGK2 314 aa7.25□□□□□ -1.25
NPLOC4-219ENST00000576713 OR1L8Q8NGR8 309 aa7.25□□□□□ -1.25
NPLOC4-219ENST00000576713 OR4A16Q8NH70 328 aa7.25□□□□□ -1.25
NPLOC4-219ENST00000576713 DCUN1D4Q92564 292 aa7.25□□□□□ -1.25
NPLOC4-219ENST00000576713 DLX4Q92988 240 aaPredicted RBP7.25□□□□□ -1.25
NPLOC4-219ENST00000576713 SLC25A21Q9BQT8 299 aaPredicted RBP7.25□□□□□ -1.25
NPLOC4-219ENST00000576713 CCDC32Q9BV29 185 aa7.25□□□□□ -1.25
NPLOC4-219ENST00000576713 PRNDQ9UKY0 176 aa7.25□□□□□ -1.25
NPLOC4-219ENST00000576713 IGHV3-21A0A0B4J1V1 117 aa7.24□□□□□ -1.25
NPLOC4-219ENST00000576713 C13orf42A0A1B0GVH6 325 aa7.24□□□□□ -1.25
NPLOC4-219ENST00000576713 NAP1L6A6NFF2 107 aa7.24□□□□□ -1.25
NPLOC4-219ENST00000576713 MPTX1A8MV57 137 aa7.24□□□□□ -1.25
NPLOC4-219ENST00000576713 PPP5D1E7EU14 171 aa7.24□□□□□ -1.25
NPLOC4-219ENST00000576713 BMPR1BO00238 502 aa7.24□□□□□ -1.25
NPLOC4-219ENST00000576713 B3GALNT1O75752 331 aa7.24□□□□□ -1.25
NPLOC4-219ENST00000576713 UPK1BO75841 260 aa7.24□□□□□ -1.25
NPLOC4-219ENST00000576713 SFT2D2O95562 160 aa7.24□□□□□ -1.25
NPLOC4-219ENST00000576713 HLA-AP01891 365 aaKnown RBP7.24□□□□□ -1.25
NPLOC4-219ENST00000576713 HOXD3P31249 432 aaPredicted RBP7.24□□□□□ -1.25
NPLOC4-219ENST00000576713 KRTAP10-11P60412 298 aa7.24□□□□□ -1.25
NPLOC4-219ENST00000576713 UBE2MP61081 183 aaKnown RBP7.24□□□□□ -1.25
NPLOC4-219ENST00000576713 HSPE1P61604 102 aaKnown RBP7.24□□□□□ -1.25
NPLOC4-219ENST00000576713 EXOSC2Q13868 293 aaKnown RBP7.24□□□□□ -1.25
NPLOC4-219ENST00000576713 ZNF429Q86V71 674 aa7.24□□□□□ -1.25
NPLOC4-219ENST00000576713 CENPSQ8N2Z9 138 aa7.24□□□□□ -1.25
NPLOC4-219ENST00000576713 NECAP1Q8NC96 275 aa7.24□□□□□ -1.25
NPLOC4-219ENST00000576713 OR5B3Q8NH48 314 aa7.24□□□□□ -1.25
NPLOC4-219ENST00000576713 S100ZQ8WXG8 99 aa7.24□□□□□ -1.25
NPLOC4-219ENST00000576713 LSM10Q969L4 123 aaKnown RBP7.24□□□□□ -1.25
NPLOC4-219ENST00000576713 SCGB3A2Q96PL1 93 aa7.24□□□□□ -1.25
NPLOC4-219ENST00000576713 CACNG5Q9UF02 275 aa7.24□□□□□ -1.25
NPLOC4-219ENST00000576713 F11RQ9Y624 299 aaKnown RBP7.24□□□□□ -1.25
NPLOC4-219ENST00000576713 COL7A1Q02388 2944 aa7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 TRAV6A0A075B6T7 132 aa7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 C9orf170A2RU37 121 aa7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 FAM223BA6NKX1 122 aa7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 LINC01619G3V211 115 aa7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 K7EIM0 57 aa7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 ADAP1O75689 374 aa7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 IGHV3-48P01763 117 aa7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 HSPB1P04792 205 aaKnown RBP7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 MALP21145 153 aa7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 DHRS2Q13268 280 aa7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 ASAH1Q13510 395 aa7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 ZNF846Q147U1 533 aa7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 PDLIM3Q53GG5 364 aaPredicted RBP7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 KPRPQ5T749 579 aaPredicted RBP7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 FAM223AQ8IWN6 122 aa7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 OR2C3Q8N628 320 aa7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 TMEM170AQ8WVE7 144 aa7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 IL22RA2Q969J5 263 aa7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 RRNAD1Q96FB5 475 aaKnown RBP7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 C8orf49Q96NF6 230 aa7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 TSC22D3Q99576 134 aa7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 C7orf50Q9BRJ6 194 aaKnown RBP7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 SRSF8Q9BRL6 282 aaKnown RBP7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 C20orf85Q9H1P6 137 aa7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 ZC4H2Q9NQZ6 224 aa7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 FAM30AQ9NZY2 134 aa7.23□□□□□ -1.25
NPLOC4-219ENST00000576713 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.22□□□□□ -1.25
NPLOC4-219ENST00000576713 A0A0B4J2A0 478 aa7.22□□□□□ -1.25
NPLOC4-219ENST00000576713 A0A0G2JLM5 398 aa7.22□□□□□ -1.25
NPLOC4-219ENST00000576713 TCRBP04435 133 aa7.22□□□□□ -1.25
NPLOC4-219ENST00000576713 OR4E1P0C645 316 aa7.22□□□□□ -1.25
NPLOC4-219ENST00000576713 RNASE2P10153 161 aaKnown RBP7.22□□□□□ -1.25
NPLOC4-219ENST00000576713 RAP2BP61225 183 aa7.22□□□□□ -1.25
NPLOC4-219ENST00000576713 ATP5G2Q06055 141 aa7.22□□□□□ -1.25
NPLOC4-219ENST00000576713 KLF5Q13887 457 aaPredicted RBP7.22□□□□□ -1.25
NPLOC4-219ENST00000576713 PVRIGQ6DKI7 326 aa7.22□□□□□ -1.25
NPLOC4-219ENST00000576713 CLEC19AQ6UXS0 136 aa7.22□□□□□ -1.25
NPLOC4-219ENST00000576713 IL34Q6ZMJ4 242 aa7.22□□□□□ -1.25
NPLOC4-219ENST00000576713 ADAMTSL5Q6ZMM2 481 aa7.22□□□□□ -1.25
NPLOC4-219ENST00000576713 HAPLN4Q86UW8 402 aa7.22□□□□□ -1.25
NPLOC4-219ENST00000576713 LRTM2Q8N967 370 aa7.22□□□□□ -1.25
NPLOC4-219ENST00000576713 RNASE11Q8TAA1 199 aaKnown RBP7.22□□□□□ -1.25
NPLOC4-219ENST00000576713 USMG5Q96IX5 58 aa7.22□□□□□ -1.25
NPLOC4-219ENST00000576713 WDR12Q9GZL7 423 aaKnown RBP7.22□□□□□ -1.25
NPLOC4-219ENST00000576713 FKBP11Q9NYL4 201 aa7.22□□□□□ -1.25
NPLOC4-219ENST00000576713 MRPL36Q9P0J6 103 aaKnown RBP7.22□□□□□ -1.25
NPLOC4-219ENST00000576713 PEF1Q9UBV8 284 aaKnown RBP7.22□□□□□ -1.25
NPLOC4-219ENST00000576713 SHPKQ9UHJ6 478 aa7.22□□□□□ -1.25
NPLOC4-219ENST00000576713 KCNIP3Q9Y2W7 256 aa7.22□□□□□ -1.25
NPLOC4-219ENST00000576713 TGP01266 2768 aa7.22□□□□□ -1.25
NPLOC4-219ENST00000576713 HUWE1Q7Z6Z7 4374 aaKnown RBP7.22□□□□□ -1.25
NPLOC4-219ENST00000576713 NOTCH3Q9UM47 2321 aa7.21□□□□□ -1.26
NPLOC4-219ENST00000576713 CENPXA8MT69 81 aa7.21□□□□□ -1.26
NPLOC4-219ENST00000576713 I3L2K1 104 aa7.21□□□□□ -1.26
NPLOC4-219ENST00000576713 PITX3O75364 302 aa7.21□□□□□ -1.26
NPLOC4-219ENST00000576713 IFNA17P01571 189 aa7.21□□□□□ -1.26
NPLOC4-219ENST00000576713 HOXB5P09067 269 aa7.21□□□□□ -1.26
NPLOC4-219ENST00000576713 OR8U8P0C7N1 319 aa7.21□□□□□ -1.26
NPLOC4-219ENST00000576713 DEFA4P12838 97 aa7.21□□□□□ -1.26
NPLOC4-219ENST00000576713 SPNP16150 400 aa7.21□□□□□ -1.26
NPLOC4-219ENST00000576713 SYNJ2BPP57105 145 aa7.21□□□□□ -1.26
NPLOC4-219ENST00000576713 BSXQ3C1V8 233 aa7.21□□□□□ -1.26
NPLOC4-219ENST00000576713 THOC7Q6I9Y2 204 aaKnown RBP7.21□□□□□ -1.26
NPLOC4-219ENST00000576713 SLC25A24Q6NUK1 477 aa7.21□□□□□ -1.26
NPLOC4-219ENST00000576713 LYG2Q86SG7 212 aa7.21□□□□□ -1.26
NPLOC4-219ENST00000576713 LGI3Q8N145 548 aa7.21□□□□□ -1.26
NPLOC4-219ENST00000576713 ZNF114Q8NC26 417 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms