RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 OR2T6Q8NHC8 308 aa11.3□□□□□ -0.6
VPS33B-208ENST00000574755 RNASEH2CQ8TDP1 164 aaKnown RBP11.3□□□□□ -0.6
VPS33B-208ENST00000574755 LOC105371242A0A075B767 164 aa11.3□□□□□ -0.6
VPS33B-208ENST00000574755 CXCL1P09341 107 aa11.3□□□□□ -0.6
VPS33B-208ENST00000574755 GCHFRP30047 84 aa11.3□□□□□ -0.6
VPS33B-208ENST00000574755 RPL23P62829 140 aaKnown RBP11.3□□□□□ -0.6
VPS33B-208ENST00000574755 PRSS8Q16651 343 aa11.3□□□□□ -0.6
VPS33B-208ENST00000574755 UBTD1Q9HAC8 227 aa11.3□□□□□ -0.6
VPS33B-208ENST00000574755 PRELID1Q9Y255 219 aa11.3□□□□□ -0.6
VPS33B-208ENST00000574755 TGIF2-C20orf24A0A0A6YYL0 155 aa11.29□□□□□ -0.6
VPS33B-208ENST00000574755 FOXH1O75593 365 aa11.29□□□□□ -0.6
VPS33B-208ENST00000574755 S100A6P06703 90 aa11.29□□□□□ -0.6
VPS33B-208ENST00000574755 NPPCP23582 126 aa11.29□□□□□ -0.6
VPS33B-208ENST00000574755 PSG5Q15238 335 aa11.29□□□□□ -0.6
VPS33B-208ENST00000574755 METTL1Q9UBP6 276 aaKnown RBP11.29□□□□□ -0.6
VPS33B-208ENST00000574755 FUT9Q9Y231 359 aa11.29□□□□□ -0.6
VPS33B-208ENST00000574755 SIGLEC9Q9Y336 463 aa11.29□□□□□ -0.6
VPS33B-208ENST00000574755 RPL27AP46776 148 aaKnown RBP11.28□□□□□ -0.6
VPS33B-208ENST00000574755 GNB1P62873 340 aa11.28□□□□□ -0.6
VPS33B-208ENST00000574755 MIR17HGQ75NE6 70 aa11.28□□□□□ -0.6
VPS33B-208ENST00000574755 PPP1R27Q86WC6 154 aa11.28□□□□□ -0.6
VPS33B-208ENST00000574755 MRPL41Q8IXM3 137 aaKnown RBP11.28□□□□□ -0.6
VPS33B-208ENST00000574755 TXNDC17Q9BRA2 123 aa11.28□□□□□ -0.6
VPS33B-208ENST00000574755 CTDSP1Q9GZU7 261 aa11.28□□□□□ -0.6
VPS33B-208ENST00000574755 FNDC4Q9H6D8 234 aaPredicted RBP11.28□□□□□ -0.6
VPS33B-208ENST00000574755 F6UZH7 168 aa11.28□□□□□ -0.6
VPS33B-208ENST00000574755 LY6LH3BQJ8 138 aa11.28□□□□□ -0.6
VPS33B-208ENST00000574755 NDUFB4O95168 129 aa11.28□□□□□ -0.6
VPS33B-208ENST00000574755 IGHV3-48P01763 117 aa11.28□□□□□ -0.6
VPS33B-208ENST00000574755 CRYGBP07316 175 aa11.28□□□□□ -0.6
VPS33B-208ENST00000574755 HTR1DP28221 377 aa11.28□□□□□ -0.6
VPS33B-208ENST00000574755 GPR6P46095 362 aaPredicted RBP11.28□□□□□ -0.6
VPS33B-208ENST00000574755 AKR1D1P51857 326 aa11.28□□□□□ -0.6
VPS33B-208ENST00000574755 SSX3Q99909 188 aa11.28□□□□□ -0.6
VPS33B-208ENST00000574755 IGLC7A0M8Q6 106 aa11.27□□□□□ -0.6
VPS33B-208ENST00000574755 NDUFS7O75251 213 aa11.27□□□□□ -0.6
VPS33B-208ENST00000574755 CLN5O75503 358 aa11.27□□□□□ -0.6
VPS33B-208ENST00000574755 APELAP0DMC3 54 aa11.27□□□□□ -0.6
VPS33B-208ENST00000574755 RND2P52198 227 aa11.27□□□□□ -0.6
VPS33B-208ENST00000574755 SNRPEP62304 92 aaKnown RBP11.27□□□□□ -0.6
VPS33B-208ENST00000574755 HCP5Q6MZN7 132 aa11.27□□□□□ -0.6
VPS33B-208ENST00000574755 DERL1Q9BUN8 251 aa11.27□□□□□ -0.6
VPS33B-208ENST00000574755 M0R1W7 72 aa11.27□□□□□ -0.61
VPS33B-208ENST00000574755 COMPP49747 757 aaPredicted RBP11.27□□□□□ -0.61
VPS33B-208ENST00000574755 LDLRAD2Q5SZI1 272 aa11.27□□□□□ -0.61
VPS33B-208ENST00000574755 TPTE2P1Q5T6R2 138 aa11.27□□□□□ -0.61
VPS33B-208ENST00000574755 C1QL4Q86Z23 238 aa11.27□□□□□ -0.61
VPS33B-208ENST00000574755 OR11H6Q8NGC7 330 aa11.27□□□□□ -0.61
VPS33B-208ENST00000574755 NPIPB3Q92617 1050 aa11.27□□□□□ -0.61
VPS33B-208ENST00000574755 C19orf24Q9BVV8 132 aa11.27□□□□□ -0.61
VPS33B-208ENST00000574755 FBXL15Q9H469 300 aa11.27□□□□□ -0.61
VPS33B-208ENST00000574755 YTHDF2Q9Y5A9 579 aaKnown RBP11.27□□□□□ -0.61
VPS33B-208ENST00000574755 HILPDAQ9Y5L2 63 aa11.27□□□□□ -0.61
VPS33B-208ENST00000574755 C19orf84I3L1E1 186 aa11.26□□□□□ -0.61
VPS33B-208ENST00000574755 TIMM23O14925 209 aa11.26□□□□□ -0.61
VPS33B-208ENST00000574755 VENTXO95231 258 aa11.26□□□□□ -0.61
VPS33B-208ENST00000574755 AREGP15514 252 aa11.26□□□□□ -0.61
VPS33B-208ENST00000574755 SSBP2P81877 361 aaPredicted RBP11.26□□□□□ -0.61
VPS33B-208ENST00000574755 KLRD1Q13241 179 aa11.26□□□□□ -0.61
VPS33B-208ENST00000574755 PLGLAQ15195 96 aa11.26□□□□□ -0.61
VPS33B-208ENST00000574755 C16orf82Q7Z2V1 217 aa11.26□□□□□ -0.61
VPS33B-208ENST00000574755 OR5T1Q8NG75 326 aa11.26□□□□□ -0.61
VPS33B-208ENST00000574755 MISP3Q96FF7 219 aa11.26□□□□□ -0.61
VPS33B-208ENST00000574755 DPM3Q9P2X0 92 aa11.26□□□□□ -0.61
VPS33B-208ENST00000574755 CEACAM3P40198 252 aa11.26□□□□□ -0.61
VPS33B-208ENST00000574755 RPL35P42766 123 aaKnown RBP11.26□□□□□ -0.61
VPS33B-208ENST00000574755 TECRQ9NZ01 308 aaKnown RBP11.26□□□□□ -0.61
VPS33B-208ENST00000574755 SCO2A0A1W2PP80 73 aa11.25□□□□□ -0.61
VPS33B-208ENST00000574755 OR7C2O60412 319 aa11.25□□□□□ -0.61
VPS33B-208ENST00000574755 OR5G3P0C626 314 aa11.25□□□□□ -0.61
VPS33B-208ENST00000574755 TAS2R45P59539 299 aa11.25□□□□□ -0.61
VPS33B-208ENST00000574755 TMEM37Q8WXS4 190 aa11.25□□□□□ -0.61
VPS33B-208ENST00000574755 KLF2Q9Y5W3 355 aaPredicted RBP11.25□□□□□ -0.61
VPS33B-208ENST00000574755 A6NNC1 897 aa11.25□□□□□ -0.61
VPS33B-208ENST00000574755 H7BYZ3 331 aa11.25□□□□□ -0.61
VPS33B-208ENST00000574755 PRTN3P24158 256 aa11.25□□□□□ -0.61
VPS33B-208ENST00000574755 ZNF114Q8NC26 417 aa11.25□□□□□ -0.61
VPS33B-208ENST00000574755 NECAP1Q8NC96 275 aa11.25□□□□□ -0.61
VPS33B-208ENST00000574755 FAM210BQ96KR6 192 aa11.25□□□□□ -0.61
VPS33B-208ENST00000574755 RNF5Q99942 180 aa11.25□□□□□ -0.61
VPS33B-208ENST00000574755 TMEM167BQ9NRX6 74 aa11.25□□□□□ -0.61
VPS33B-208ENST00000574755 DOK5Q9P104 306 aa11.25□□□□□ -0.61
VPS33B-208ENST00000574755 ASH1LQ9NR48 2969 aaKnown RBP11.24□□□□□ -0.61
VPS33B-208ENST00000574755 A0A1W2PRD5 423 aa11.24□□□□□ -0.61
VPS33B-208ENST00000574755 A0A1W2PRF3 423 aa11.24□□□□□ -0.61
VPS33B-208ENST00000574755 A0A1W2PRM7 423 aa11.24□□□□□ -0.61
VPS33B-208ENST00000574755 TCRBV4S1A1TA0A5B7 111 aa11.24□□□□□ -0.61
VPS33B-208ENST00000574755 ZNF90Q03938 601 aa11.24□□□□□ -0.61
VPS33B-208ENST00000574755 MMDQ15546 238 aa11.24□□□□□ -0.61
VPS33B-208ENST00000574755 ETFRF1Q6IPR1 90 aa11.24□□□□□ -0.61
VPS33B-208ENST00000574755 PQLC2Q6ZP29 291 aa11.24□□□□□ -0.61
VPS33B-208ENST00000574755 LHFPL4Q7Z7J7 247 aa11.24□□□□□ -0.61
VPS33B-208ENST00000574755 LINC01551Q86U37 167 aa11.24□□□□□ -0.61
VPS33B-208ENST00000574755 MRPL36Q9P0J6 103 aaKnown RBP11.24□□□□□ -0.61
VPS33B-208ENST00000574755 C5orf52A6NGY3 159 aa11.24□□□□□ -0.61
VPS33B-208ENST00000574755 MFAP2P55001 183 aa11.24□□□□□ -0.61
VPS33B-208ENST00000574755 C19orf35Q6ZS72 473 aa11.24□□□□□ -0.61
VPS33B-208ENST00000574755 SRSF12Q8WXF0 261 aaKnown RBP11.24□□□□□ -0.61
VPS33B-208ENST00000574755 OR5B12Q96R08 314 aa11.24□□□□□ -0.61
VPS33B-208ENST00000574755 AURKAIP1Q9NWT8 199 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms