RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 MYCNOSP40205 109 aa12.87□□□□□ -0.35
TMEM88-202ENST00000574668 EXOSC2Q13868 293 aaKnown RBP12.87□□□□□ -0.35
TMEM88-202ENST00000574668 C15orf32Q32M92 178 aa12.87□□□□□ -0.35
TMEM88-202ENST00000574668 GSG1LQ6UXU4 331 aa12.87□□□□□ -0.35
TMEM88-202ENST00000574668 ZBTB8BQ8NAP8 495 aaPredicted RBP12.87□□□□□ -0.35
TMEM88-202ENST00000574668 ZNF114Q8NC26 417 aa12.87□□□□□ -0.35
TMEM88-202ENST00000574668 DTD1Q8TEA8 209 aa12.87□□□□□ -0.35
TMEM88-202ENST00000574668 MISP3Q96FF7 219 aa12.87□□□□□ -0.35
TMEM88-202ENST00000574668 ANKRD34BA5PLL1 514 aa12.86□□□□□ -0.35
TMEM88-202ENST00000574668 CCL24O00175 119 aa12.86□□□□□ -0.35
TMEM88-202ENST00000574668 SCGB1D2O95969 90 aa12.86□□□□□ -0.35
TMEM88-202ENST00000574668 NKX2-1P43699 371 aaPredicted RBP12.86□□□□□ -0.35
TMEM88-202ENST00000574668 KRTAP10-11P60412 298 aa12.86□□□□□ -0.35
TMEM88-202ENST00000574668 RUNX1Q01196 453 aa12.86□□□□□ -0.35
TMEM88-202ENST00000574668 TATDN3Q17R31 274 aa12.86□□□□□ -0.35
TMEM88-202ENST00000574668 KLK9Q2XQG4 91 aa12.86□□□□□ -0.35
TMEM88-202ENST00000574668 DEFB136Q30KP8 78 aa12.86□□□□□ -0.35
TMEM88-202ENST00000574668 OR11H1Q8NG94 326 aa12.86□□□□□ -0.35
TMEM88-202ENST00000574668 EEF1AKMT3Q96AZ1 226 aa12.86□□□□□ -0.35
TMEM88-202ENST00000574668 OR10C1Q96KK4 312 aa12.86□□□□□ -0.35
TMEM88-202ENST00000574668 CXorf58Q96LI9 332 aa12.86□□□□□ -0.35
TMEM88-202ENST00000574668 MAGT1Q9H0U3 335 aa12.86□□□□□ -0.35
TMEM88-202ENST00000574668 KLK9Q9UKQ9 250 aa12.86□□□□□ -0.35
TMEM88-202ENST00000574668 WI2-2373I1.2A0A1W2PRP0 233 aa12.85□□□□□ -0.35
TMEM88-202ENST00000574668 I3L521 148 aa12.85□□□□□ -0.35
TMEM88-202ENST00000574668 GOSR2O14653 212 aa12.85□□□□□ -0.35
TMEM88-202ENST00000574668 SYNGR2O43760 224 aa12.85□□□□□ -0.35
TMEM88-202ENST00000574668 IFNA10P01566 189 aa12.85□□□□□ -0.35
TMEM88-202ENST00000574668 HSPB1P04792 205 aaKnown RBP12.85□□□□□ -0.35
TMEM88-202ENST00000574668 RNASE2P10153 161 aaKnown RBP12.85□□□□□ -0.35
TMEM88-202ENST00000574668 IAPPP10997 89 aa12.85□□□□□ -0.35
TMEM88-202ENST00000574668 HTR2BP41595 481 aa12.85□□□□□ -0.35
TMEM88-202ENST00000574668 MFAP2P55001 183 aa12.85□□□□□ -0.35
TMEM88-202ENST00000574668 DEFB121Q5J5C9 76 aa12.85□□□□□ -0.35
TMEM88-202ENST00000574668 FAM209BQ5JX69 171 aa12.85□□□□□ -0.35
TMEM88-202ENST00000574668 NOXA1Q86UR1 476 aa12.85□□□□□ -0.35
TMEM88-202ENST00000574668 OR4D5Q8NGN0 318 aa12.85□□□□□ -0.35
TMEM88-202ENST00000574668 OR1N2Q8NGR9 330 aa12.85□□□□□ -0.35
TMEM88-202ENST00000574668 RAX2Q96IS3 184 aa12.85□□□□□ -0.35
TMEM88-202ENST00000574668 C2orf50Q96LR7 162 aa12.85□□□□□ -0.35
TMEM88-202ENST00000574668 DUX3Q96PT4 197 aa12.85□□□□□ -0.35
TMEM88-202ENST00000574668 CIB3Q96Q77 187 aaPredicted RBP12.85□□□□□ -0.35
TMEM88-202ENST00000574668 DMRT1Q9Y5R6 373 aa12.85□□□□□ -0.35
TMEM88-202ENST00000574668 ALG5Q9Y673 324 aa12.85□□□□□ -0.35
TMEM88-202ENST00000574668 LINC01619G3V211 115 aa12.84□□□□□ -0.35
TMEM88-202ENST00000574668 IGHV3-23P01764 117 aa12.84□□□□□ -0.35
TMEM88-202ENST00000574668 ID3Q02535 119 aa12.84□□□□□ -0.35
TMEM88-202ENST00000574668 ZNF616Q08AN1 781 aa12.84□□□□□ -0.35
TMEM88-202ENST00000574668 ZNF343Q6P1L6 599 aa12.84□□□□□ -0.35
TMEM88-202ENST00000574668 SLC24A4Q8NFF2 622 aa12.84□□□□□ -0.35
TMEM88-202ENST00000574668 VN1R17PQ8TDU5 208 aa12.84□□□□□ -0.35
TMEM88-202ENST00000574668 PINX1Q96BK5 328 aaKnown RBP12.84□□□□□ -0.35
TMEM88-202ENST00000574668 RANGRFQ9HD47 186 aaPredicted RBP12.84□□□□□ -0.35
TMEM88-202ENST00000574668 PEF1Q9UBV8 284 aaKnown RBP12.84□□□□□ -0.35
TMEM88-202ENST00000574668 S4R3C0 116 aa12.84□□□□□ -0.35
TMEM88-202ENST00000574668 U3KQ87 197 aa12.84□□□□□ -0.35
TMEM88-202ENST00000574668 IGHV4OR15-8A0A075B7B6 117 aa12.83□□□□□ -0.36
TMEM88-202ENST00000574668 A0A087WW49 117 aa12.83□□□□□ -0.36
TMEM88-202ENST00000574668 TRBV7-1A0A0A6YYK4 115 aa12.83□□□□□ -0.36
TMEM88-202ENST00000574668 IGHV3-21A0A0B4J1V1 117 aa12.83□□□□□ -0.36
TMEM88-202ENST00000574668 C7orf66A4D0T2 115 aa12.83□□□□□ -0.36
TMEM88-202ENST00000574668 CORTO00230 105 aa12.83□□□□□ -0.36
TMEM88-202ENST00000574668 LY86O95711 162 aa12.83□□□□□ -0.36
TMEM88-202ENST00000574668 NPY1RP25929 384 aa12.83□□□□□ -0.36
TMEM88-202ENST00000574668 RPP30P78346 268 aaKnown RBP12.83□□□□□ -0.36
TMEM88-202ENST00000574668 OXA1LQ15070 435 aa12.83□□□□□ -0.36
TMEM88-202ENST00000574668 C2orf83Q53S99 150 aa12.83□□□□□ -0.36
TMEM88-202ENST00000574668 PAIP2BQ9ULR5 123 aaKnown RBP12.83□□□□□ -0.36
TMEM88-202ENST00000574668 COL7A1Q02388 2944 aa12.83□□□□□ -0.36
TMEM88-202ENST00000574668 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.82□□□□□ -0.36
TMEM88-202ENST00000574668 MFSD2BA6NFX1 497 aa12.82□□□□□ -0.36
TMEM88-202ENST00000574668 OR8U8P0C7N1 319 aa12.82□□□□□ -0.36
TMEM88-202ENST00000574668 HOXD3P31249 432 aaPredicted RBP12.82□□□□□ -0.36
TMEM88-202ENST00000574668 ATP5IP56385 69 aaPredicted RBP12.82□□□□□ -0.36
TMEM88-202ENST00000574668 POLR2GP62487 172 aaKnown RBP eCLIP12.82□□□□□ -0.36
TMEM88-202ENST00000574668 CLEC19AQ6UXS0 136 aa12.82□□□□□ -0.36
TMEM88-202ENST00000574668 ETV3LQ6ZN32 361 aa12.82□□□□□ -0.36
TMEM88-202ENST00000574668 K7EIM0 57 aa12.81□□□□□ -0.36
TMEM88-202ENST00000574668 SSSCA1O60232 199 aa12.81□□□□□ -0.36
TMEM88-202ENST00000574668 SIX6O95475 246 aa12.81□□□□□ -0.36
TMEM88-202ENST00000574668 MT-CO2P00403 227 aa12.81□□□□□ -0.36
TMEM88-202ENST00000574668 RAB11AP62491 216 aa12.81□□□□□ -0.36
TMEM88-202ENST00000574668 BSXQ3C1V8 233 aa12.81□□□□□ -0.36
TMEM88-202ENST00000574668 Q56UQ5 140 aa12.81□□□□□ -0.36
TMEM88-202ENST00000574668 SCARB1Q8WTV0 552 aa12.81□□□□□ -0.36
TMEM88-202ENST00000574668 C21orf62Q9NYP8 219 aa12.81□□□□□ -0.36
TMEM88-202ENST00000574668 MGAT4CQ9UBM8 478 aa12.81□□□□□ -0.36
TMEM88-202ENST00000574668 LSM5Q9Y4Y9 91 aaKnown RBP12.81□□□□□ -0.36
TMEM88-202ENST00000574668 RPS10-NUDT3A0A1W2PQS6 291 aa12.8□□□□□ -0.36
TMEM88-202ENST00000574668 I3L2K1 104 aa12.8□□□□□ -0.36
TMEM88-202ENST00000574668 L7N2F9 121 aa12.8□□□□□ -0.36
TMEM88-202ENST00000574668 MBPP02686 304 aaPredicted RBP12.8□□□□□ -0.36
TMEM88-202ENST00000574668 IFNA4P05014 189 aa12.8□□□□□ -0.36
TMEM88-202ENST00000574668 ZP3P21754 424 aa12.8□□□□□ -0.36
TMEM88-202ENST00000574668 OPRK1P41145 380 aa12.8□□□□□ -0.36
TMEM88-202ENST00000574668 MFAP4P55083 255 aa12.8□□□□□ -0.36
TMEM88-202ENST00000574668 S100A10P60903 97 aa12.8□□□□□ -0.36
TMEM88-202ENST00000574668 VAMP2P63027 116 aa12.8□□□□□ -0.36
TMEM88-202ENST00000574668 RPEL1Q2QD12 228 aa12.8□□□□□ -0.36
TMEM88-202ENST00000574668 UBAC2Q8NBM4 344 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms