RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 PATZ1Q9HBE1 687 aaKnown RBP13.14□□□□□ -0.31
USP43-204ENST00000573955 PSENENQ9NZ42 101 aa13.14□□□□□ -0.31
USP43-204ENST00000573955 M0R1X1 148 aa13.13□□□□□ -0.31
USP43-204ENST00000573955 PLAUP00749 431 aa13.13□□□□□ -0.31
USP43-204ENST00000573955 SLC25A6P12236 298 aa13.13□□□□□ -0.31
USP43-204ENST00000573955 ZNF266Q14584 549 aa13.13□□□□□ -0.31
USP43-204ENST00000573955 SPANXN5Q5MJ07 72 aa13.13□□□□□ -0.31
USP43-204ENST00000573955 SP5Q6BEB4 398 aaPredicted RBP13.13□□□□□ -0.31
USP43-204ENST00000573955 OR5AU1Q8NGC0 362 aa13.13□□□□□ -0.31
USP43-204ENST00000573955 BTF3L4Q96K17 158 aa13.13□□□□□ -0.31
USP43-204ENST00000573955 SHISA9B4DS77 424 aa13.13□□□□□ -0.31
USP43-204ENST00000573955 FCGR3BO75015 233 aa13.13□□□□□ -0.31
USP43-204ENST00000573955 TNFRSF1AP19438 455 aa13.13□□□□□ -0.31
USP43-204ENST00000573955 TSPOP30536 169 aa13.13□□□□□ -0.31
USP43-204ENST00000573955 RPS16P62249 146 aaKnown RBP13.13□□□□□ -0.31
USP43-204ENST00000573955 KLRB1Q12918 225 aa13.13□□□□□ -0.31
USP43-204ENST00000573955 C17orf58Q2M2W7 97 aa13.13□□□□□ -0.31
USP43-204ENST00000573955 KLHDC1Q8N7A1 406 aa13.13□□□□□ -0.31
USP43-204ENST00000573955 ZNF665Q9H7R5 613 aa13.13□□□□□ -0.31
USP43-204ENST00000573955 DYNLRB1Q9NP97 96 aa13.13□□□□□ -0.31
USP43-204ENST00000573955 JPT1Q9UK76 154 aa13.13□□□□□ -0.31
USP43-204ENST00000573955 TRAPPC1Q9Y5R8 145 aa13.13□□□□□ -0.31
USP43-204ENST00000573955 E7EQL1 145 aa13.12□□□□□ -0.31
USP43-204ENST00000573955 RAB40CQ96S21 281 aa13.12□□□□□ -0.31
USP43-204ENST00000573955 NAT8Q9UHE5 227 aa13.12□□□□□ -0.31
USP43-204ENST00000573955 SCGB1A1P11684 91 aa13.12□□□□□ -0.31
USP43-204ENST00000573955 TAS2R30P59541 319 aa13.12□□□□□ -0.31
USP43-204ENST00000573955 SLAQ13239 276 aa13.12□□□□□ -0.31
USP43-204ENST00000573955 TCF23Q7RTU1 214 aa13.12□□□□□ -0.31
USP43-204ENST00000573955 CISD1Q9NZ45 108 aaKnown RBP13.12□□□□□ -0.31
USP43-204ENST00000573955 TRGV10A0A0A0MS01 117 aa13.11□□□□□ -0.31
USP43-204ENST00000573955 PIGBOS1A0A0B4J2F0 54 aa13.11□□□□□ -0.31
USP43-204ENST00000573955 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.11□□□□□ -0.31
USP43-204ENST00000573955 ZFP92A6NM28 416 aa13.11□□□□□ -0.31
USP43-204ENST00000573955 CA7P43166 264 aa13.11□□□□□ -0.31
USP43-204ENST00000573955 ARL16Q0P5N6 197 aa13.11□□□□□ -0.31
USP43-204ENST00000573955 ZNF788Q6ZQV5 615 aa13.11□□□□□ -0.31
USP43-204ENST00000573955 C1orf229Q6ZS94 237 aaPredicted RBP13.11□□□□□ -0.31
USP43-204ENST00000573955 VKORC1L1Q8N0U8 176 aa13.11□□□□□ -0.31
USP43-204ENST00000573955 Q8TCH9 128 aa13.11□□□□□ -0.31
USP43-204ENST00000573955 ATP6V0BQ99437 205 aa13.11□□□□□ -0.31
USP43-204ENST00000573955 HSD17B10Q99714 261 aaKnown RBP13.11□□□□□ -0.31
USP43-204ENST00000573955 ZNRD1Q9P1U0 126 aa13.11□□□□□ -0.31
USP43-204ENST00000573955 LRRC30A6NM36 301 aa13.11□□□□□ -0.31
USP43-204ENST00000573955 DIRC3C9JPN6 131 aa13.11□□□□□ -0.31
USP43-204ENST00000573955 RBFOX2O43251 390 aaKnown RBP eCLIP13.11□□□□□ -0.31
USP43-204ENST00000573955 DUTP33316 252 aaKnown RBP13.11□□□□□ -0.31
USP43-204ENST00000573955 BAXQ07812 192 aa13.11□□□□□ -0.31
USP43-204ENST00000573955 BSXQ3C1V8 233 aa13.11□□□□□ -0.31
USP43-204ENST00000573955 H2BFWTQ7Z2G1 175 aa13.11□□□□□ -0.31
USP43-204ENST00000573955 IFI27L2Q9H2X8 130 aa13.11□□□□□ -0.31
USP43-204ENST00000573955 NGBQ9NPG2 151 aa13.11□□□□□ -0.31
USP43-204ENST00000573955 MAP1AP78559 2803 aaPredicted RBP13.1□□□□□ -0.31
USP43-204ENST00000573955 G3V4G9 280 aa13.1□□□□□ -0.31
USP43-204ENST00000573955 F2RL2O00254 374 aa13.1□□□□□ -0.31
USP43-204ENST00000573955 ZDHHC16Q969W1 377 aa13.1□□□□□ -0.31
USP43-204ENST00000573955 DSCAML1Q8TD84 2053 aa13.1□□□□□ -0.31
USP43-204ENST00000573955 KBTBD11-OT1A0A1B0GTJ5 212 aa13.1□□□□□ -0.31
USP43-204ENST00000573955 IGLC7A0M8Q6 106 aa13.1□□□□□ -0.31
USP43-204ENST00000573955 BCL2P10415 239 aa13.1□□□□□ -0.31
USP43-204ENST00000573955 PRAMEF5Q5TYX0 476 aa13.1□□□□□ -0.31
USP43-204ENST00000573955 TCTEX1D1Q8N7M0 179 aa13.1□□□□□ -0.31
USP43-204ENST00000573955 RNASE6Q93091 150 aaKnown RBP13.1□□□□□ -0.31
USP43-204ENST00000573955 ATP5SQ99766 215 aa13.1□□□□□ -0.31
USP43-204ENST00000573955 TANC2Q9HCD6 1990 aa13.1□□□□□ -0.31
USP43-204ENST00000573955 KRTDAPP60985 99 aa13.09□□□□□ -0.31
USP43-204ENST00000573955 CR1LQ2VPA4 569 aa13.09□□□□□ -0.31
USP43-204ENST00000573955 LRRC10Q5BKY1 277 aa13.09□□□□□ -0.31
USP43-204ENST00000573955 CT45A1Q5HYN5 189 aa13.09□□□□□ -0.31
USP43-204ENST00000573955 FAM71F2Q6NXP2 309 aa13.09□□□□□ -0.31
USP43-204ENST00000573955 KCNIP4Q6PIL6 250 aa13.09□□□□□ -0.31
USP43-204ENST00000573955 ST6GALNAC3Q8NDV1 305 aa13.09□□□□□ -0.31
USP43-204ENST00000573955 CT45A3Q8NHU0 189 aa13.09□□□□□ -0.31
USP43-204ENST00000573955 SAMD10Q9BYL1 202 aa13.09□□□□□ -0.31
USP43-204ENST00000573955 PARLQ9H300 379 aa13.09□□□□□ -0.31
USP43-204ENST00000573955 MYO18BQ8IUG5 2567 aa13.09□□□□□ -0.31
USP43-204ENST00000573955 CGB3P0DN86 165 aa13.09□□□□□ -0.31
USP43-204ENST00000573955 CGB7P0DN87 165 aa13.09□□□□□ -0.31
USP43-204ENST00000573955 CRYBA4P53673 196 aa13.09□□□□□ -0.31
USP43-204ENST00000573955 MSMO1Q15800 293 aa13.09□□□□□ -0.31
USP43-204ENST00000573955 CENPVQ7Z7K6 275 aaPredicted RBP13.09□□□□□ -0.31
USP43-204ENST00000573955 HAPLN4Q86UW8 402 aa13.09□□□□□ -0.31
USP43-204ENST00000573955 PNKDQ8N490 385 aa13.09□□□□□ -0.31
USP43-204ENST00000573955 OR1N2Q8NGR9 330 aa13.09□□□□□ -0.31
USP43-204ENST00000573955 SMIM7Q9BQ49 75 aa13.09□□□□□ -0.31
USP43-204ENST00000573955 IGHV2-26A0A0B4J1V2 119 aa13.09□□□□□ -0.31
USP43-204ENST00000573955 ZG16O60844 167 aa13.09□□□□□ -0.31
USP43-204ENST00000573955 CD3EP07766 207 aa13.09□□□□□ -0.31
USP43-204ENST00000573955 SRP14P37108 136 aaKnown RBP13.09□□□□□ -0.31
USP43-204ENST00000573955 PSG3Q16557 428 aa13.09□□□□□ -0.31
USP43-204ENST00000573955 TEX36Q5VZQ5 186 aa13.09□□□□□ -0.31
USP43-204ENST00000573955 AMMECR1LQ6DCA0 310 aa13.09□□□□□ -0.31
USP43-204ENST00000573955 P2RX4Q99571 388 aa13.09□□□□□ -0.31
USP43-204ENST00000573955 SLC25A10Q9UBX3 287 aaPredicted RBP13.09□□□□□ -0.31
USP43-204ENST00000573955 SVEP1Q4LDE5 3571 aa13.08□□□□□ -0.31
USP43-204ENST00000573955 P0C879 139 aa13.08□□□□□ -0.32
USP43-204ENST00000573955 PPIAL4GP0DN37 164 aa13.08□□□□□ -0.32
USP43-204ENST00000573955 CD99P14209 185 aa13.08□□□□□ -0.32
USP43-204ENST00000573955 LYPD2Q6UXB3 125 aa13.08□□□□□ -0.32
USP43-204ENST00000573955 OR5B3Q8NH48 314 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms