RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 ZNF431Q8TF32 576 aaPredicted RBP8.5□□□□□ -1.05
CHD3-216ENST00000573936 ATP6V0BQ99437 205 aa8.5□□□□□ -1.05
CHD3-216ENST00000573936 ZMAT5Q9UDW3 170 aaKnown RBP8.5□□□□□ -1.05
CHD3-216ENST00000573936 ALG5Q9Y673 324 aa8.5□□□□□ -1.05
CHD3-216ENST00000573936 CEBPZOSA8MTT3 80 aa8.49□□□□□ -1.05
CHD3-216ENST00000573936 SNRPGP15A8MWD9 76 aa8.49□□□□□ -1.05
CHD3-216ENST00000573936 CORTO00230 105 aa8.49□□□□□ -1.05
CHD3-216ENST00000573936 OVOL1O14753 267 aa8.49□□□□□ -1.05
CHD3-216ENST00000573936 IFNA21P01568 189 aa8.49□□□□□ -1.05
CHD3-216ENST00000573936 IGLL1P15814 213 aa8.49□□□□□ -1.05
CHD3-216ENST00000573936 RPEL1Q2QD12 228 aa8.49□□□□□ -1.05
CHD3-216ENST00000573936 BEAN1Q3B7T3 259 aa8.49□□□□□ -1.05
CHD3-216ENST00000573936 C9orf66Q5T8R8 295 aa8.49□□□□□ -1.05
CHD3-216ENST00000573936 SAMD5Q5TGI4 173 aa8.49□□□□□ -1.05
CHD3-216ENST00000573936 OR1S1Q8NH92 325 aa8.49□□□□□ -1.05
CHD3-216ENST00000573936 MITD1Q8WV92 249 aa8.49□□□□□ -1.05
CHD3-216ENST00000573936 DCUN1D4Q92564 292 aa8.49□□□□□ -1.05
CHD3-216ENST00000573936 HIPK2Q9H2X6 1198 aa8.49□□□□□ -1.05
CHD3-216ENST00000573936 GPN1Q9HCN4 374 aaPredicted RBP8.49□□□□□ -1.05
CHD3-216ENST00000573936 TNCP24821 2201 aa8.49□□□□□ -1.05
CHD3-216ENST00000573936 KMT2CQ8NEZ4 4911 aaKnown RBP8.48□□□□□ -1.05
CHD3-216ENST00000573936 GGCTO75223 188 aaKnown RBP8.48□□□□□ -1.05
CHD3-216ENST00000573936 MED6O75586 246 aa8.48□□□□□ -1.05
CHD3-216ENST00000573936 HOXB5P09067 269 aa8.48□□□□□ -1.05
CHD3-216ENST00000573936 HOXD3P31249 432 aaPredicted RBP8.48□□□□□ -1.05
CHD3-216ENST00000573936 HTR2BP41595 481 aa8.48□□□□□ -1.05
CHD3-216ENST00000573936 INSL3P51460 131 aa8.48□□□□□ -1.05
CHD3-216ENST00000573936 SLURP1P55000 103 aa8.48□□□□□ -1.05
CHD3-216ENST00000573936 OXLD1Q5BKU9 147 aa8.48□□□□□ -1.05
CHD3-216ENST00000573936 SPINK9Q5DT21 86 aa8.48□□□□□ -1.05
CHD3-216ENST00000573936 NOXA1Q86UR1 476 aa8.48□□□□□ -1.05
CHD3-216ENST00000573936 C12orf45Q8N5I9 185 aaPredicted RBP8.48□□□□□ -1.05
CHD3-216ENST00000573936 DLX4Q92988 240 aaPredicted RBP8.48□□□□□ -1.05
CHD3-216ENST00000573936 ELOVL1Q9BW60 279 aa8.48□□□□□ -1.05
CHD3-216ENST00000573936 GAR1Q9NY12 217 aaKnown RBP8.48□□□□□ -1.05
CHD3-216ENST00000573936 COL7A1Q02388 2944 aa8.48□□□□□ -1.05
CHD3-216ENST00000573936 FAM90A26D6RGX4 464 aa8.47□□□□□ -1.05
CHD3-216ENST00000573936 PITX3O75364 302 aa8.47□□□□□ -1.05
CHD3-216ENST00000573936 ARL3P36405 182 aa8.47□□□□□ -1.05
CHD3-216ENST00000573936 MFAP2P55001 183 aa8.47□□□□□ -1.05
CHD3-216ENST00000573936 TNFRSF9Q07011 255 aa8.47□□□□□ -1.05
CHD3-216ENST00000573936 KLF5Q13887 457 aaPredicted RBP8.47□□□□□ -1.05
CHD3-216ENST00000573936 GGNBP1Q5YKI7 109 aa8.47□□□□□ -1.05
CHD3-216ENST00000573936 CLEC19AQ6UXS0 136 aa8.47□□□□□ -1.05
CHD3-216ENST00000573936 ZNF502Q8TBZ5 544 aa8.47□□□□□ -1.05
CHD3-216ENST00000573936 MISP3Q96FF7 219 aa8.47□□□□□ -1.05
CHD3-216ENST00000573936 TXN2Q99757 166 aa8.47□□□□□ -1.05
CHD3-216ENST00000573936 HEYLQ9NQ87 328 aaPredicted RBP8.47□□□□□ -1.05
CHD3-216ENST00000573936 C21orf62Q9NYP8 219 aa8.47□□□□□ -1.05
CHD3-216ENST00000573936 HSPB7Q9UBY9 170 aa8.47□□□□□ -1.05
CHD3-216ENST00000573936 DMRT1Q9Y5R6 373 aa8.47□□□□□ -1.05
CHD3-216ENST00000573936 DNAH9Q9NYC9 4486 aa8.46□□□□□ -1.05
CHD3-216ENST00000573936 A0A1B0GVG6 124 aa8.46□□□□□ -1.06
CHD3-216ENST00000573936 MFSD2BA6NFX1 497 aa8.46□□□□□ -1.06
CHD3-216ENST00000573936 SEC14L6B5MCN3 397 aa8.46□□□□□ -1.06
CHD3-216ENST00000573936 BMPR1BO00238 502 aa8.46□□□□□ -1.06
CHD3-216ENST00000573936 ADAP1O75689 374 aa8.46□□□□□ -1.06
CHD3-216ENST00000573936 LY86O95711 162 aa8.46□□□□□ -1.06
CHD3-216ENST00000573936 TRBV12-3P01733 135 aa8.46□□□□□ -1.06
CHD3-216ENST00000573936 IGHV3-23P01764 117 aa8.46□□□□□ -1.06
CHD3-216ENST00000573936 CLEC3BP05452 202 aa8.46□□□□□ -1.06
CHD3-216ENST00000573936 RNASE2P10153 161 aaKnown RBP8.46□□□□□ -1.06
CHD3-216ENST00000573936 MFAP4P55083 255 aa8.46□□□□□ -1.06
CHD3-216ENST00000573936 ATP5IP56385 69 aaPredicted RBP8.46□□□□□ -1.06
CHD3-216ENST00000573936 BSXQ3C1V8 233 aa8.46□□□□□ -1.06
CHD3-216ENST00000573936 FAM106AQ4KMX7 169 aa8.46□□□□□ -1.06
CHD3-216ENST00000573936 KPRPQ5T749 579 aaPredicted RBP8.46□□□□□ -1.06
CHD3-216ENST00000573936 PVRIGQ6DKI7 326 aa8.46□□□□□ -1.06
CHD3-216ENST00000573936 ACSM6Q6P461 480 aa8.46□□□□□ -1.06
CHD3-216ENST00000573936 SPSB3Q6PJ21 355 aa8.46□□□□□ -1.06
CHD3-216ENST00000573936 UXS1Q8NBZ7 420 aa8.46□□□□□ -1.06
CHD3-216ENST00000573936 DTD1Q8TEA8 209 aa8.46□□□□□ -1.06
CHD3-216ENST00000573936 SCARB1Q8WTV0 552 aa8.46□□□□□ -1.06
CHD3-216ENST00000573936 CCDC140Q96MF4 163 aa8.46□□□□□ -1.06
CHD3-216ENST00000573936 RBKSQ9H477 322 aa8.46□□□□□ -1.06
CHD3-216ENST00000573936 PEMTQ9UBM1 199 aa8.46□□□□□ -1.06
CHD3-216ENST00000573936 U3KQ87 197 aa8.46□□□□□ -1.06
CHD3-216ENST00000573936 hCG_2014768A0A024R1R8 64 aa8.45□□□□□ -1.06
CHD3-216ENST00000573936 RPS10-NUDT3A0A1W2PQS6 291 aa8.45□□□□□ -1.06
CHD3-216ENST00000573936 I3L2K1 104 aa8.45□□□□□ -1.06
CHD3-216ENST00000573936 K7EIM0 57 aa8.45□□□□□ -1.06
CHD3-216ENST00000573936 SSNA1O43805 119 aa8.45□□□□□ -1.06
CHD3-216ENST00000573936 NXPH3O95157 252 aa8.45□□□□□ -1.06
CHD3-216ENST00000573936 MT-CO2P00403 227 aa8.45□□□□□ -1.06
CHD3-216ENST00000573936 FCGR2BP31994 310 aaPredicted RBP8.45□□□□□ -1.06
CHD3-216ENST00000573936 NPBWR1P48145 328 aa8.45□□□□□ -1.06
CHD3-216ENST00000573936 SYNJ2BPP57105 145 aa8.45□□□□□ -1.06
CHD3-216ENST00000573936 RPP30P78346 268 aaKnown RBP8.45□□□□□ -1.06
CHD3-216ENST00000573936 C2orf83Q53S99 150 aa8.45□□□□□ -1.06
CHD3-216ENST00000573936 Q56UQ5 140 aa8.45□□□□□ -1.06
CHD3-216ENST00000573936 GPHB5Q86YW7 130 aa8.45□□□□□ -1.06
CHD3-216ENST00000573936 SLC24A4Q8NFF2 622 aa8.45□□□□□ -1.06
CHD3-216ENST00000573936 RNASEH2CQ8TDP1 164 aaKnown RBP8.45□□□□□ -1.06
CHD3-216ENST00000573936 PINX1Q96BK5 328 aaKnown RBP8.45□□□□□ -1.06
CHD3-216ENST00000573936 BSCL2Q96G97 398 aaPredicted RBP8.45□□□□□ -1.06
CHD3-216ENST00000573936 CIB3Q96Q77 187 aaPredicted RBP8.45□□□□□ -1.06
CHD3-216ENST00000573936 OR4C12Q96R67 309 aa8.45□□□□□ -1.06
CHD3-216ENST00000573936 S4R3C0 116 aa8.45□□□□□ -1.06
CHD3-216ENST00000573936 IGHV3-21A0A0B4J1V1 117 aa8.44□□□□□ -1.06
CHD3-216ENST00000573936 PPP5D1E7EU14 171 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms