RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 SCTP09683 121 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 GSTT2P0CG29 244 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 GSTT2BP0CG30 244 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 SAA2P0DJI9 122 aaPredicted RBP2.9□□□□□ -1.95
NUP88-202ENST00000570937 RRASP10301 218 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 VDAC1P21796 283 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 CD40LGP29965 261 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 SLC6A1P30531 599 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 SSTP61278 116 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 TMEM267Q0VDI3 215 aaPredicted RBP2.9□□□□□ -1.95
NUP88-202ENST00000570937 PLGLAQ15195 96 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 MMDQ15546 238 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 RTL8BQ17RB0 113 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 UBE2NLQ5JXB2 153 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 TMEM69Q5SWH9 247 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 CNIH2Q6PI25 160 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 SLC35E3Q7Z769 313 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 NDUFA11Q86Y39 141 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 C5orf56Q8N8D9 126 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 SAMD12Q8N8I0 201 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 NHLRC2Q8NBF2 726 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 OR5AU1Q8NGC0 362 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 OR13F1Q8NGS4 319 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 LGALS14Q8TCE9 139 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 RAB2BQ8WUD1 216 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 C15orf40Q8WUR7 153 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 BORCS5Q969J3 196 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 SLC25A46Q96AG3 418 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 FLYWCH2Q96CP2 140 aaKnown RBP2.9□□□□□ -1.95
NUP88-202ENST00000570937 YIPF6Q96EC8 236 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 ADTRPQ96IZ2 230 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 TSNAXQ99598 290 aaKnown RBP2.9□□□□□ -1.95
NUP88-202ENST00000570937 ABCG5Q9H222 651 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 ZNF702PQ9H963 129 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 IFT46Q9NQC8 304 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 NECAP2Q9NVZ3 263 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 RDH8Q9NYR8 311 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 ANXA10Q9UJ72 324 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 SIGLEC9Q9Y336 463 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 WASHC3Q9Y3C0 194 aa2.9□□□□□ -1.95
NUP88-202ENST00000570937 STAB1Q9NY15 2570 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 IGHV3-72A0A0B4J1Y9 119 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 PSMB11A5LHX3 300 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 TMEM235A6NFC5 223 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 M0R1X1 148 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 SLC31A2O15432 143 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 NBR2O15453 112 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 CREBL2O60519 120 aaPredicted RBP2.89□□□□□ -1.95
NUP88-202ENST00000570937 IGHG2P01859 326 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 OR8U9P0C7N5 309 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 CTRB1P17538 263 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 S100GP29377 79 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 PRSS3P35030 304 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 RPL5P46777 297 aaKnown RBP2.89□□□□□ -1.95
NUP88-202ENST00000570937 LGALS7P47929 136 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 TMBIM6P55061 237 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 TAS2R46P59540 309 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 ACTBP60709 375 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 VBP1P61758 197 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 LSM3P62310 102 aaKnown RBP2.89□□□□□ -1.95
NUP88-202ENST00000570937 S100A12P80511 92 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 DIAPH2-AS1Q14236 149 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 GNMTQ14749 295 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 GPR107Q5VW38 600 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 ZNF660Q6AZW8 331 aaPredicted RBP2.89□□□□□ -1.95
NUP88-202ENST00000570937 CTRB2Q6GPI1 263 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 ZNF600Q6ZNG1 722 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 SLC51BQ86UW2 128 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 PDPNQ86YL7 162 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 FAM71E2Q8N5Q1 922 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 NPBQ8NG41 125 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 OR8U1Q8NH10 309 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 ENKURQ8TC29 256 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 ABHD14BQ96IU4 210 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 CYYR1Q96J86 154 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 NABP2Q9BQ15 211 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 BCL7BQ9BQE9 202 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 AGMATQ9BSE5 352 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 HDHD3Q9BSH5 251 aaPredicted RBP2.89□□□□□ -1.95
NUP88-202ENST00000570937 DCUN1D5Q9BTE7 237 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 TOLLIPQ9H0E2 274 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 OR2D2Q9H210 308 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 IFI27L2Q9H2X8 130 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 RNF167Q9H6Y7 350 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 AUNIPQ9H7T9 357 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 DHRS4-AS1Q9P1J3 65 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 OR1A1Q9P1Q5 309 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 COMMD3Q9UBI1 195 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 ZNF230Q9UIE0 474 aaPredicted RBP2.89□□□□□ -1.95
NUP88-202ENST00000570937 CELA1Q9UNI1 258 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 MRPS7Q9Y2R9 242 aaKnown RBP2.89□□□□□ -1.95
NUP88-202ENST00000570937 PRELID3BQ9Y3B1 194 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 FBXO7Q9Y3I1 522 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 TSSC4Q9Y5U2 329 aaPredicted RBP2.89□□□□□ -1.95
NUP88-202ENST00000570937 KIAA2026Q5HYC2 2103 aa2.89□□□□□ -1.95
NUP88-202ENST00000570937 DSCAML1Q8TD84 2053 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 IGKV1-6A0A0C4DH72 117 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 FAM25AB3EWG3 89 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 FAM25CB3EWG5 89 aa2.88□□□□□ -1.95
NUP88-202ENST00000570937 FAM25GB3EWG6 89 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms