RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 Q8N1X5 172 aa8.1□□□□□ -1.11
VPS53-207ENST00000570510 DGCR14Q96DF8 476 aaKnown RBP8.1□□□□□ -1.11
VPS53-207ENST00000570510 DIRAS2Q96HU8 199 aa8.1□□□□□ -1.11
VPS53-207ENST00000570510 CCDC140Q96MF4 163 aa8.1□□□□□ -1.11
VPS53-207ENST00000570510 ABHD1Q96SE0 405 aa8.1□□□□□ -1.11
VPS53-207ENST00000570510 ATP6V0BQ99437 205 aa8.1□□□□□ -1.11
VPS53-207ENST00000570510 SOSTQ9BQB4 213 aa8.1□□□□□ -1.11
VPS53-207ENST00000570510 NDUFAF3Q9BU61 184 aa8.1□□□□□ -1.11
VPS53-207ENST00000570510 ZNF430Q9H8G1 570 aaPredicted RBP8.1□□□□□ -1.11
VPS53-207ENST00000570510 CACFD1Q9UGQ2 172 aa8.1□□□□□ -1.11
VPS53-207ENST00000570510 IGLV2-18A0A075B6J9 118 aa8.09□□□□□ -1.11
VPS53-207ENST00000570510 HMX3A6NHT5 357 aa8.09□□□□□ -1.11
VPS53-207ENST00000570510 NPIPB5A8MRT5 1133 aa8.09□□□□□ -1.11
VPS53-207ENST00000570510 CTDSP2O14595 271 aa8.09□□□□□ -1.11
VPS53-207ENST00000570510 S1PR2O95136 353 aa8.09□□□□□ -1.11
VPS53-207ENST00000570510 PMP2P02689 132 aa8.09□□□□□ -1.11
VPS53-207ENST00000570510 CRYGCP07315 174 aa8.09□□□□□ -1.11
VPS53-207ENST00000570510 ZNF735P0CB33 412 aa8.09□□□□□ -1.11
VPS53-207ENST00000570510 PTHLHP12272 177 aa8.09□□□□□ -1.11
VPS53-207ENST00000570510 HIST1H1BP16401 226 aaKnown RBP8.09□□□□□ -1.11
VPS53-207ENST00000570510 BRWD1-AS2P59051 145 aa8.09□□□□□ -1.11
VPS53-207ENST00000570510 ERVK-16P61578 105 aa8.09□□□□□ -1.11
VPS53-207ENST00000570510 RPL8P62917 257 aaKnown RBP8.09□□□□□ -1.11
VPS53-207ENST00000570510 MRGPRG-AS1Q2M3A8 158 aa8.09□□□□□ -1.11
VPS53-207ENST00000570510 C1orf134Q5TEV5 83 aa8.09□□□□□ -1.11
VPS53-207ENST00000570510 AADACL3Q5VUY0 350 aa8.09□□□□□ -1.11
VPS53-207ENST00000570510 Q6ZTC4 211 aa8.09□□□□□ -1.11
VPS53-207ENST00000570510 OR52I2Q8NH67 350 aa8.09□□□□□ -1.11
VPS53-207ENST00000570510 TERB2Q8NHR7 220 aa8.09□□□□□ -1.11
VPS53-207ENST00000570510 CXorf58Q96LI9 332 aa8.09□□□□□ -1.11
VPS53-207ENST00000570510 SCGB3A2Q96PL1 93 aa8.09□□□□□ -1.11
VPS53-207ENST00000570510 FYTTD1Q96QD9 318 aaKnown RBP8.09□□□□□ -1.11
VPS53-207ENST00000570510 MIXL1Q9H2W2 232 aa8.09□□□□□ -1.11
VPS53-207ENST00000570510 SLC2A9Q9NRM0 540 aa8.09□□□□□ -1.11
VPS53-207ENST00000570510 MEIS3P1A6NDR6 274 aa8.08□□□□□ -1.12
VPS53-207ENST00000570510 GPR183P32249 361 aa8.08□□□□□ -1.12
VPS53-207ENST00000570510 S100A5P33763 92 aa8.08□□□□□ -1.12
VPS53-207ENST00000570510 ETV6P41212 452 aa8.08□□□□□ -1.12
VPS53-207ENST00000570510 TFPI2P48307 235 aa8.08□□□□□ -1.12
VPS53-207ENST00000570510 FXYD4P59646 89 aa8.08□□□□□ -1.12
VPS53-207ENST00000570510 AP3S2P59780 193 aa8.08□□□□□ -1.12
VPS53-207ENST00000570510 C10orf55Q5SWW7 151 aa8.08□□□□□ -1.12
VPS53-207ENST00000570510 STEAP1BQ6NZ63 245 aa8.08□□□□□ -1.12
VPS53-207ENST00000570510 CCDC71LQ8N9Z2 235 aa8.08□□□□□ -1.12
VPS53-207ENST00000570510 MCFD2Q8NI22 146 aa8.08□□□□□ -1.12
VPS53-207ENST00000570510 PRRT1Q99946 306 aa8.08□□□□□ -1.12
VPS53-207ENST00000570510 RBM38Q9H0Z9 239 aaKnown RBP8.08□□□□□ -1.12
VPS53-207ENST00000570510 DAZ1Q9NQZ3 744 aaKnown RBP8.08□□□□□ -1.12
VPS53-207ENST00000570510 KLK11Q9UBX7 282 aa8.08□□□□□ -1.12
VPS53-207ENST00000570510 DEFB131BA0A096LNP1 70 aa8.07□□□□□ -1.12
VPS53-207ENST00000570510 FABP12A6NFH5 140 aa8.07□□□□□ -1.12
VPS53-207ENST00000570510 MARCH11A6NNE9 402 aa8.07□□□□□ -1.12
VPS53-207ENST00000570510 DISC1C4P0D8 188 aa8.07□□□□□ -1.12
VPS53-207ENST00000570510 UPK2O00526 184 aa8.07□□□□□ -1.12
VPS53-207ENST00000570510 RAB3DO95716 219 aa8.07□□□□□ -1.12
VPS53-207ENST00000570510 CD3DP04234 171 aa8.07□□□□□ -1.12
VPS53-207ENST00000570510 AKAIN1P0CW23 69 aa8.07□□□□□ -1.12
VPS53-207ENST00000570510 HLA-GP17693 338 aa8.07□□□□□ -1.12
VPS53-207ENST00000570510 PSMB6P28072 239 aa8.07□□□□□ -1.12
VPS53-207ENST00000570510 FAUP35544 74 aaKnown RBP8.07□□□□□ -1.12
VPS53-207ENST00000570510 RPL27AP46776 148 aaKnown RBP8.07□□□□□ -1.12
VPS53-207ENST00000570510 IL18Q14116 193 aa8.07□□□□□ -1.12
VPS53-207ENST00000570510 RBMY1FQ15415 496 aaKnown RBP8.07□□□□□ -1.12
VPS53-207ENST00000570510 C19orf35Q6ZS72 473 aa8.07□□□□□ -1.12
VPS53-207ENST00000570510 LINC00299Q6ZSB3 139 aa8.07□□□□□ -1.12
VPS53-207ENST00000570510 C20orf24Q9BUV8 137 aa8.07□□□□□ -1.12
VPS53-207ENST00000570510 COMMD5Q9GZQ3 224 aa8.07□□□□□ -1.12
VPS53-207ENST00000570510 FXYD6Q9H0Q3 95 aa8.07□□□□□ -1.12
VPS53-207ENST00000570510 THYN1Q9P016 225 aa8.07□□□□□ -1.12
VPS53-207ENST00000570510 SCP2D1Q9UJQ7 156 aa8.07□□□□□ -1.12
VPS53-207ENST00000570510 PRNDQ9UKY0 176 aa8.07□□□□□ -1.12
VPS53-207ENST00000570510 DNAH11Q96DT5 4516 aa8.07□□□□□ -1.12
VPS53-207ENST00000570510 IGKV3-7A0A075B6H7 116 aa8.06□□□□□ -1.12
VPS53-207ENST00000570510 J3QRK9 145 aa8.06□□□□□ -1.12
VPS53-207ENST00000570510 CTSDP07339 412 aaPredicted RBP8.06□□□□□ -1.12
VPS53-207ENST00000570510 TNFSF8P32971 234 aa8.06□□□□□ -1.12
VPS53-207ENST00000570510 ZNF124Q15973 351 aa8.06□□□□□ -1.12
VPS53-207ENST00000570510 FAM219AQ8IW50 185 aa8.06□□□□□ -1.12
VPS53-207ENST00000570510 OR1L8Q8NGR8 309 aa8.06□□□□□ -1.12
VPS53-207ENST00000570510 OR51H1Q8NH63 302 aa8.06□□□□□ -1.12
VPS53-207ENST00000570510 HRASLSQ9HDD0 168 aa8.06□□□□□ -1.12
VPS53-207ENST00000570510 PKD1P98161 4303 aa8.05□□□□□ -1.12
VPS53-207ENST00000570510 IGHV4-28A0A0C4DH34 117 aa8.05□□□□□ -1.12
VPS53-207ENST00000570510 ANKRD20A5PA0PJZ0 165 aa8.05□□□□□ -1.12
VPS53-207ENST00000570510 TEX22C9J3V5 150 aa8.05□□□□□ -1.12
VPS53-207ENST00000570510 INS-IGF2F8WCM5 200 aa8.05□□□□□ -1.12
VPS53-207ENST00000570510 TNFSF12O43508 249 aa8.05□□□□□ -1.12
VPS53-207ENST00000570510 SNAPC5O75971 98 aa8.05□□□□□ -1.12
VPS53-207ENST00000570510 AMBPP02760 352 aa8.05□□□□□ -1.12
VPS53-207ENST00000570510 RLN1P04808 185 aa8.05□□□□□ -1.12
VPS53-207ENST00000570510 SERPINE2P07093 398 aa8.05□□□□□ -1.12
VPS53-207ENST00000570510 MIFP14174 115 aa8.05□□□□□ -1.12
VPS53-207ENST00000570510 NPY1RP25929 384 aa8.05□□□□□ -1.12
VPS53-207ENST00000570510 OR2B8PP59922 312 aa8.05□□□□□ -1.12
VPS53-207ENST00000570510 PAFAH1B2P68402 229 aa8.05□□□□□ -1.12
VPS53-207ENST00000570510 GDPD1Q8N9F7 314 aa8.05□□□□□ -1.12
VPS53-207ENST00000570510 DMBX1Q8NFW5 382 aa8.05□□□□□ -1.12
VPS53-207ENST00000570510 TMEM56Q96MV1 263 aa8.05□□□□□ -1.12
VPS53-207ENST00000570510 FANCD2OSQ96PS1 177 aa8.05□□□□□ -1.12
VPS53-207ENST00000570510 CHRDL1Q9BU40 450 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms