RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 TMEM14BQ9NUH8 114 aa8.5□□□□□ -1.05
GTF3C1-209ENST00000568569 NDUFB11Q9NX14 153 aa8.5□□□□□ -1.05
GTF3C1-209ENST00000568569 RABAC1Q9UI14 185 aa8.5□□□□□ -1.05
GTF3C1-209ENST00000568569 PRNDQ9UKY0 176 aa8.5□□□□□ -1.05
GTF3C1-209ENST00000568569 IGLV2-18A0A075B6J9 118 aa8.49□□□□□ -1.05
GTF3C1-209ENST00000568569 IGHV3-66A0A0C4DH42 116 aa8.49□□□□□ -1.05
GTF3C1-209ENST00000568569 TRDV1A0A1B0GX56 115 aa8.49□□□□□ -1.05
GTF3C1-209ENST00000568569 NOTOA8MTQ0 251 aa8.49□□□□□ -1.05
GTF3C1-209ENST00000568569 ANKRD65E5RJM6 399 aa8.49□□□□□ -1.05
GTF3C1-209ENST00000568569 MT-CO2P00403 227 aa8.49□□□□□ -1.05
GTF3C1-209ENST00000568569 RLN1P04808 185 aa8.49□□□□□ -1.05
GTF3C1-209ENST00000568569 F2RP25116 425 aa8.49□□□□□ -1.05
GTF3C1-209ENST00000568569 HERV-K104P61576 105 aa8.49□□□□□ -1.05
GTF3C1-209ENST00000568569 TBCEQ15813 527 aaPredicted RBP8.49□□□□□ -1.05
GTF3C1-209ENST00000568569 C22orf42Q6IC83 251 aa8.49□□□□□ -1.05
GTF3C1-209ENST00000568569 Q6ZR54 194 aa8.49□□□□□ -1.05
GTF3C1-209ENST00000568569 ZNF367Q7RTV3 350 aa8.49□□□□□ -1.05
GTF3C1-209ENST00000568569 HOGA1Q86XE5 327 aa8.49□□□□□ -1.05
GTF3C1-209ENST00000568569 UBE2DNLQ8IWF7 75 aa8.49□□□□□ -1.05
GTF3C1-209ENST00000568569 TSPAN14Q8NG11 270 aa8.49□□□□□ -1.05
GTF3C1-209ENST00000568569 FCAMRQ8WWV6 532 aa8.49□□□□□ -1.05
GTF3C1-209ENST00000568569 GRAMD2BQ96HH9 432 aa8.49□□□□□ -1.05
GTF3C1-209ENST00000568569 CLEC5AQ9NY25 188 aa8.49□□□□□ -1.05
GTF3C1-209ENST00000568569 KNCNA6PVL3 124 aa8.48□□□□□ -1.05
GTF3C1-209ENST00000568569 IFNA21P01568 189 aa8.48□□□□□ -1.05
GTF3C1-209ENST00000568569 IFNA17P01571 189 aa8.48□□□□□ -1.05
GTF3C1-209ENST00000568569 IGHV3-48P01763 117 aa8.48□□□□□ -1.05
GTF3C1-209ENST00000568569 CD74P04233 296 aa8.48□□□□□ -1.05
GTF3C1-209ENST00000568569 NPY1RP25929 384 aa8.48□□□□□ -1.05
GTF3C1-209ENST00000568569 GNRHRP30968 328 aa8.48□□□□□ -1.05
GTF3C1-209ENST00000568569 G6PCP35575 357 aa8.48□□□□□ -1.05
GTF3C1-209ENST00000568569 Q6ZRM9 215 aa8.48□□□□□ -1.05
GTF3C1-209ENST00000568569 TPRA1Q86W33 373 aa8.48□□□□□ -1.05
GTF3C1-209ENST00000568569 ZNF114Q8NC26 417 aa8.48□□□□□ -1.05
GTF3C1-209ENST00000568569 CSNK1G2-AS1Q8NCQ2 148 aa8.48□□□□□ -1.05
GTF3C1-209ENST00000568569 STXBP6Q8NFX7 210 aa8.48□□□□□ -1.05
GTF3C1-209ENST00000568569 LGALS14Q8TCE9 139 aa8.48□□□□□ -1.05
GTF3C1-209ENST00000568569 PINX1Q96BK5 328 aaKnown RBP8.48□□□□□ -1.05
GTF3C1-209ENST00000568569 TSC22D3Q99576 134 aa8.48□□□□□ -1.05
GTF3C1-209ENST00000568569 SCRT1Q9BWW7 348 aa8.48□□□□□ -1.05
GTF3C1-209ENST00000568569 ZFAND3Q9H8U3 227 aa8.48□□□□□ -1.05
GTF3C1-209ENST00000568569 RHBDL2Q9NX52 303 aa8.48□□□□□ -1.05
GTF3C1-209ENST00000568569 DAPK2Q9UIK4 370 aa8.48□□□□□ -1.05
GTF3C1-209ENST00000568569 PUS1Q9Y606 427 aaKnown RBP eCLIP8.48□□□□□ -1.05
GTF3C1-209ENST00000568569 LRP1BQ9NZR2 4599 aa8.47□□□□□ -1.05
GTF3C1-209ENST00000568569 A0A1W2PS18 150 aa8.47□□□□□ -1.05
GTF3C1-209ENST00000568569 DBX1A6NMT0 343 aa8.47□□□□□ -1.05
GTF3C1-209ENST00000568569 K7EQG2 157 aa8.47□□□□□ -1.05
GTF3C1-209ENST00000568569 CDK2AP2O75956 126 aa8.47□□□□□ -1.05
GTF3C1-209ENST00000568569 ZNF688P0C7X2 276 aa8.47□□□□□ -1.05
GTF3C1-209ENST00000568569 LPAR6P43657 344 aa8.47□□□□□ -1.05
GTF3C1-209ENST00000568569 NPBWR1P48145 328 aa8.47□□□□□ -1.05
GTF3C1-209ENST00000568569 ACTL10Q5JWF8 245 aa8.47□□□□□ -1.05
GTF3C1-209ENST00000568569 ZNF600Q6ZNG1 722 aa8.47□□□□□ -1.05
GTF3C1-209ENST00000568569 OR5AP2Q8NGF4 316 aa8.47□□□□□ -1.05
GTF3C1-209ENST00000568569 TRAV18A0A075B6X5 111 aa8.46□□□□□ -1.06
GTF3C1-209ENST00000568569 PGLYRP1O75594 196 aaPredicted RBP8.46□□□□□ -1.06
GTF3C1-209ENST00000568569 FCER2P06734 321 aa8.46□□□□□ -1.06
GTF3C1-209ENST00000568569 C1orf134Q5TEV5 83 aa8.46□□□□□ -1.06
GTF3C1-209ENST00000568569 CMTM1Q8IZ96 169 aa8.46□□□□□ -1.06
GTF3C1-209ENST00000568569 MAPKAPK5-AS1Q8N8E1 139 aa8.46□□□□□ -1.06
GTF3C1-209ENST00000568569 MOB3AQ96BX8 217 aa8.46□□□□□ -1.06
GTF3C1-209ENST00000568569 FAM210BQ96KR6 192 aa8.46□□□□□ -1.06
GTF3C1-209ENST00000568569 C1QTNF4Q9BXJ3 329 aa8.46□□□□□ -1.06
GTF3C1-209ENST00000568569 A0A0A6YYH2 397 aa8.45□□□□□ -1.06
GTF3C1-209ENST00000568569 A6NJ64 397 aa8.45□□□□□ -1.06
GTF3C1-209ENST00000568569 C16orf90A8MZG2 172 aa8.45□□□□□ -1.06
GTF3C1-209ENST00000568569 NPPCP23582 126 aa8.45□□□□□ -1.06
GTF3C1-209ENST00000568569 P2RY1P47900 373 aa8.45□□□□□ -1.06
GTF3C1-209ENST00000568569 SCAND1P57086 179 aa8.45□□□□□ -1.06
GTF3C1-209ENST00000568569 NUTF2P61970 127 aaKnown RBP8.45□□□□□ -1.06
GTF3C1-209ENST00000568569 PRCDQ00LT1 54 aa8.45□□□□□ -1.06
GTF3C1-209ENST00000568569 KCTD21Q4G0X4 260 aa8.45□□□□□ -1.06
GTF3C1-209ENST00000568569 SFXN4Q6P4A7 337 aa8.45□□□□□ -1.06
GTF3C1-209ENST00000568569 DCANP1Q8TF63 244 aa8.45□□□□□ -1.06
GTF3C1-209ENST00000568569 METTL26Q96S19 204 aa8.45□□□□□ -1.06
GTF3C1-209ENST00000568569 EHFQ9NZC4 300 aa8.45□□□□□ -1.06
GTF3C1-209ENST00000568569 RRP15Q9Y3B9 282 aaKnown RBP8.45□□□□□ -1.06
GTF3C1-209ENST00000568569 AGRNO00468 2067 aa8.44□□□□□ -1.06
GTF3C1-209ENST00000568569 A0A1B0GU03 582 aa8.44□□□□□ -1.06
GTF3C1-209ENST00000568569 SPART-AS1P0CW21 52 aa8.44□□□□□ -1.06
GTF3C1-209ENST00000568569 FGF9P31371 208 aaPredicted RBP8.44□□□□□ -1.06
GTF3C1-209ENST00000568569 CBX5P45973 191 aa8.44□□□□□ -1.06
GTF3C1-209ENST00000568569 EIF2B2P49770 351 aaKnown RBP8.44□□□□□ -1.06
GTF3C1-209ENST00000568569 AQP4P55087 323 aa8.44□□□□□ -1.06
GTF3C1-209ENST00000568569 ERHP84090 104 aaKnown RBP8.44□□□□□ -1.06
GTF3C1-209ENST00000568569 OR4A16Q8NH70 328 aa8.44□□□□□ -1.06
GTF3C1-209ENST00000568569 SLC25A38Q96DW6 304 aa8.44□□□□□ -1.06
GTF3C1-209ENST00000568569 NARS2Q96I59 477 aaKnown RBP8.44□□□□□ -1.06
GTF3C1-209ENST00000568569 AUNIPQ9H7T9 357 aa8.44□□□□□ -1.06
GTF3C1-209ENST00000568569 HERC1Q15751 4861 aa8.43□□□□□ -1.06
GTF3C1-209ENST00000568569 TMEM189A5PLL7 270 aa8.43□□□□□ -1.06
GTF3C1-209ENST00000568569 TMEM50AO95807 157 aa8.43□□□□□ -1.06
GTF3C1-209ENST00000568569 CRYBB3P26998 211 aa8.43□□□□□ -1.06
GTF3C1-209ENST00000568569 RNF212Q495C1 297 aa8.43□□□□□ -1.06
GTF3C1-209ENST00000568569 DHRS11Q6UWP2 260 aa8.43□□□□□ -1.06
GTF3C1-209ENST00000568569 RAB40CQ96S21 281 aa8.43□□□□□ -1.06
GTF3C1-209ENST00000568569 ZNF2Q9BSG1 426 aaPredicted RBP8.43□□□□□ -1.06
GTF3C1-209ENST00000568569 IFT46Q9NQC8 304 aa8.43□□□□□ -1.06
GTF3C1-209ENST00000568569 TXNL4BQ9NX01 149 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms