RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 PLPP5Q8NEB5 264 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 WFDC11Q8NEX6 87 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 OR4D11Q8NGI4 311 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 OR5A1Q8NGJ0 315 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 OR8D4Q8NGM9 314 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 OR10J5Q8NHC4 309 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 LRRC20Q8TCA0 184 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 WFDC5Q8TCV5 224 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 CCDC12Q8WUD4 166 aaPredicted RBP-0.19□□□□□ -2.44
CDH1-211ENST00000567320 SFT2D1Q8WV19 159 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 DNAJB3Q8WWF6 145 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 PLAC4Q8WY50 150 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 C11orf40Q8WZ69 217 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 HIST1H2BHQ93079 126 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 SMIM12Q96EX1 92 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 ADAT3Q96EY9 351 aaPredicted RBP-0.19□□□□□ -2.44
CDH1-211ENST00000567320 ZC2HC1AQ96GY0 325 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 RBP7Q96R05 134 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 CYTH2Q99418 400 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 HIST1H2BNQ99877 126 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 HIST1H2BMQ99879 126 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 UPF3BQ9BZI7 483 aaKnown RBP-0.19□□□□□ -2.44
CDH1-211ENST00000567320 ULBP3Q9BZM4 244 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 WDR61Q9GZS3 305 aaKnown RBP-0.19□□□□□ -2.44
CDH1-211ENST00000567320 HDHD2Q9H0R4 259 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 METTL9Q9H1A3 318 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 DCSTAMPQ9H295 470 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 OR51I1Q9H343 314 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 C11orf68Q9H3H3 251 aaKnown RBP-0.19□□□□□ -2.44
CDH1-211ENST00000567320 NCOR1P1Q9H4R4 102 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 METTL8Q9H825 291 aaKnown RBP-0.19□□□□□ -2.44
CDH1-211ENST00000567320 PSTPIP2Q9H939 334 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 XAGE1AQ9HD64 81 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 GPR84Q9NQS5 396 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 AGPAT3Q9NRZ7 376 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 IMP3Q9NV31 184 aaKnown RBP-0.19□□□□□ -2.44
CDH1-211ENST00000567320 C1orf109Q9NX04 203 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 TAS2R4Q9NYW5 299 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 CKLFQ9UBR5 152 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 DKKL1Q9UK85 242 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 U3KQ87 197 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 V9GYY5 206 aaPredicted RBP-0.19□□□□□ -2.44
CDH1-211ENST00000567320 FRMPD1Q5SYB0 1578 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 MUC2Q02817 5179 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 MGAMO43451 1857 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 MUC12Q9UKN1 5478 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 TET1Q8NFU7 2136 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 CELSR1Q9NYQ6 3014 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 TRBV20OR9-2A0A075B6H5 130 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 TRAV9-1A0A075B6T8 112 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 IGHV1-58A0A0C4DH39 117 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 IGHV1-69-2A0A0G2JMI3 117 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 TRBV30A0A0K0K1B3 111 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 TEX50A0A1B0GTY4 177 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 KCNK1O00180 336 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 NDUFS8O00217 210 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 FAAHO00519 579 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 LIN7AO14910 233 aaPredicted RBP-0.2□□□□□ -2.44
CDH1-211ENST00000567320 TOX3O15405 576 aaPredicted RBP-0.2□□□□□ -2.44
CDH1-211ENST00000567320 SULT1B1O43704 296 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 GADD45GO95257 159 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 YEATS4O95619 227 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 PPYP01298 95 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 IGLV1-51P01701 117 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 C1QAP02745 245 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 ORM1P02763 201 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 PRM2P04554 102 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 TYMSP04818 313 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 IVLP07476 585 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 TPM2P07951 284 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 HTR1AP08908 422 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 CCDC172P0C7W6 258 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 COX5BP10606 129 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 COX6A1P12074 109 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 CCL4P13236 92 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 UGT2B7P16662 529 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 KDELR1P24390 212 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 RPL12P30050 165 aaKnown RBP-0.2□□□□□ -2.44
CDH1-211ENST00000567320 SRIP30626 198 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 RNASE4P34096 147 aaKnown RBP-0.2□□□□□ -2.44
CDH1-211ENST00000567320 CD151P48509 253 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 HADHBP55084 474 aaKnown RBP-0.2□□□□□ -2.44
CDH1-211ENST00000567320 ROMO1P60602 79 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 CCL20P78556 96 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 QRFPP83859 136 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 IFITM2Q01629 132 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 EBPQ15125 230 aaKnown RBP-0.2□□□□□ -2.44
CDH1-211ENST00000567320 RHEBQ15382 184 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 SYCP1Q15431 976 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 KCNJ8Q15842 424 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 DNAL1Q4LDG9 190 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 Q5BKY6 102 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 SPANXN3Q5MJ09 141 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 BRMS1LQ5PSV4 323 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 C1orf195Q5TG92 126 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 FAM78BQ5VT40 261 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 HAGHLQ6PII5 290 aaPredicted RBP-0.2□□□□□ -2.44
CDH1-211ENST00000567320 DNM1P34Q6PK57 102 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 C5orf46Q6UWT4 87 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 PLEKHG7Q6ZR37 379 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms