RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 DIRC3C9JPN6 131 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 J3QR06 171 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 TMPRSS2O15393 492 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 OR5G3P0C626 314 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 CHRNB4P30926 498 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 CCKARP32238 428 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 GNG5P63218 68 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 SSBP2P81877 361 aaPredicted RBP5.3□□□□□ -1.56
GINS3-206ENST00000567143 LEMD1Q68G75 181 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 C1orf159Q96HA4 380 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 GMPPAQ96IJ6 420 aaPredicted RBP5.3□□□□□ -1.56
GINS3-206ENST00000567143 EAF1Q96JC9 268 aaPredicted RBP5.3□□□□□ -1.56
GINS3-206ENST00000567143 TMEM208Q9BTX3 173 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 IFI27L2Q9H2X8 130 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 NPVFQ9HCQ7 196 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 RALYQ9UKM9 306 aaKnown RBP5.3□□□□□ -1.56
GINS3-206ENST00000567143 MRPS18CQ9Y3D5 142 aaKnown RBP5.3□□□□□ -1.56
GINS3-206ENST00000567143 NOTCH3Q9UM47 2321 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 IGHV2OR16-5A0A0B4J2B6 119 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 PIGBOS1A0A0B4J2F0 54 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 IGHV1-18A0A0C4DH31 117 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 SH2D7A6NKC9 451 aaPredicted RBP5.3□□□□□ -1.56
GINS3-206ENST00000567143 C15orf65H3BRN8 121 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 TCF21O43680 179 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 TDGF1P3P51864 188 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 FOXA3P55318 350 aaPredicted RBP5.3□□□□□ -1.56
GINS3-206ENST00000567143 RHOBP62745 196 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 RPEL1Q2QD12 228 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 Q56UQ5 140 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 C1orf194Q5T5A4 169 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 Q6ZT83 130 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 TMEM144Q7Z5S9 345 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 WDR31Q8NA23 367 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 IGFBPL1Q8WX77 278 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 NABP2Q9BQ15 211 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 OR51B2Q9Y5P1 312 aa5.3□□□□□ -1.56
GINS3-206ENST00000567143 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.29□□□□□ -1.56
GINS3-206ENST00000567143 SRRM4A7MD48 611 aaKnown RBP5.29□□□□□ -1.56
GINS3-206ENST00000567143 HINT1P49773 126 aaPredicted RBP5.29□□□□□ -1.56
GINS3-206ENST00000567143 ZNF137PP52743 207 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 RANP62826 216 aaKnown RBP5.29□□□□□ -1.56
GINS3-206ENST00000567143 LCN2P80188 198 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 RAB31Q13636 194 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 DEFB109BQ30KR1 87 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 TIGITQ495A1 244 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 COA6Q5JTJ3 125 aaKnown RBP5.29□□□□□ -1.56
GINS3-206ENST00000567143 TMEM178AQ8NBL3 297 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 H1FXQ92522 213 aaKnown RBP5.29□□□□□ -1.56
GINS3-206ENST00000567143 NEU1Q99519 415 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 TECRQ9NZ01 308 aaKnown RBP5.29□□□□□ -1.56
GINS3-206ENST00000567143 GGTLC3B5MD39 225 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 CCL3L1P16619 93 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 ORM2P19652 201 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 OPRK1P41145 380 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 VDAC2P45880 294 aaPredicted RBP5.29□□□□□ -1.56
GINS3-206ENST00000567143 MFAP2P55001 183 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 UBE2L3P68036 154 aaKnown RBP5.29□□□□□ -1.56
GINS3-206ENST00000567143 DIAPH2-AS1Q14236 149 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 TPTE2P1Q5T6R2 138 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 HCP5Q6MZN7 132 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 Q6ZN92 141 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 C22orf34Q6ZV56 151 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 CENPVQ7Z7K6 275 aaPredicted RBP5.29□□□□□ -1.56
GINS3-206ENST00000567143 ZBTB34Q8NCN2 500 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 STARD4Q96DR4 205 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 E7EUB6 86 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 ENSAO43768 121 aaKnown RBP5.29□□□□□ -1.56
GINS3-206ENST00000567143 MOSP00540 346 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 PDLIM4P50479 330 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 RPP30P78346 268 aaKnown RBP5.29□□□□□ -1.56
GINS3-206ENST00000567143 KLRB1Q12918 225 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 EIF4EBP1Q13541 118 aaPredicted RBP5.29□□□□□ -1.56
GINS3-206ENST00000567143 SPATA45Q537H7 98 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 RNASEKQ6P5S7 137 aaKnown RBP5.29□□□□□ -1.56
GINS3-206ENST00000567143 RBMXL3Q8N7X1 1067 aaKnown RBP5.29□□□□□ -1.56
GINS3-206ENST00000567143 OR2D3Q8NGH3 330 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 OR4S2Q8NH73 311 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 TMEM68Q96MH6 324 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 PMCHL2Q9BQD1 86 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 GSX1Q9H4S2 264 aaPredicted RBP5.29□□□□□ -1.56
GINS3-206ENST00000567143 NRN1Q9NPD7 142 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 ZNF586Q9NXT0 402 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 IL36BQ9NZH7 164 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 GOLT1BQ9Y3E0 138 aa5.29□□□□□ -1.56
GINS3-206ENST00000567143 TMEM210A6NLX4 147 aa5.28□□□□□ -1.56
GINS3-206ENST00000567143 TYMSP04818 313 aa5.28□□□□□ -1.56
GINS3-206ENST00000567143 RPLP1P05386 114 aaKnown RBP5.28□□□□□ -1.56
GINS3-206ENST00000567143 ADH4P08319 380 aa5.28□□□□□ -1.56
GINS3-206ENST00000567143 RPL8P62917 257 aaKnown RBP5.28□□□□□ -1.56
GINS3-206ENST00000567143 FOXL1Q12952 345 aa5.28□□□□□ -1.56
GINS3-206ENST00000567143 TMEM183BQ1AE95 376 aa5.28□□□□□ -1.56
GINS3-206ENST00000567143 IBA57Q5T440 356 aaKnown RBP5.28□□□□□ -1.56
GINS3-206ENST00000567143 FAM90A1Q86YD7 464 aa5.28□□□□□ -1.56
GINS3-206ENST00000567143 C11orf42Q8N5U0 333 aa5.28□□□□□ -1.56
GINS3-206ENST00000567143 TPPP3Q9BW30 176 aa5.28□□□□□ -1.56
GINS3-206ENST00000567143 HES4Q9HCC6 221 aa5.28□□□□□ -1.56
GINS3-206ENST00000567143 SLC35D1Q9NTN3 355 aa5.28□□□□□ -1.56
GINS3-206ENST00000567143 CORTO00230 105 aa5.28□□□□□ -1.56
GINS3-206ENST00000567143 LOXL3P58215 753 aa5.28□□□□□ -1.56
GINS3-206ENST00000567143 HSPE1P61604 102 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms