RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 SPINK9Q5DT21 86 aa11.63□□□□□ -0.55
CDH3-204ENST00000565453 OR13C8Q8NGS7 320 aa11.63□□□□□ -0.55
CDH3-204ENST00000565453 TERB2Q8NHR7 220 aa11.63□□□□□ -0.55
CDH3-204ENST00000565453 IL17DQ8TAD2 202 aa11.63□□□□□ -0.55
CDH3-204ENST00000565453 NXF2Q9GZY0 626 aaKnown RBP11.63□□□□□ -0.55
CDH3-204ENST00000565453 A0A0G2JRQ6 117 aa11.62□□□□□ -0.55
CDH3-204ENST00000565453 IGHV7-4-1A0A0J9YVY3 117 aa11.62□□□□□ -0.55
CDH3-204ENST00000565453 GABARAPH6UMI1 98 aa11.62□□□□□ -0.55
CDH3-204ENST00000565453 CTDSP2O14595 271 aa11.62□□□□□ -0.55
CDH3-204ENST00000565453 CHEK1O14757 476 aa11.62□□□□□ -0.55
CDH3-204ENST00000565453 ST8SIA3O43173 380 aa11.62□□□□□ -0.55
CDH3-204ENST00000565453 RAB3DO95716 219 aa11.62□□□□□ -0.55
CDH3-204ENST00000565453 UCP1P25874 307 aa11.62□□□□□ -0.55
CDH3-204ENST00000565453 TAS2R19P59542 299 aa11.62□□□□□ -0.55
CDH3-204ENST00000565453 SP6Q3SY56 376 aa11.62□□□□□ -0.55
CDH3-204ENST00000565453 STEAP1BQ6NZ63 245 aa11.62□□□□□ -0.55
CDH3-204ENST00000565453 GPR141Q7Z602 305 aa11.62□□□□□ -0.55
CDH3-204ENST00000565453 ZFAND1Q8TCF1 268 aa11.62□□□□□ -0.55
CDH3-204ENST00000565453 RNF2Q99496 336 aa11.62□□□□□ -0.55
CDH3-204ENST00000565453 OR4C46A6NHA9 309 aa11.61□□□□□ -0.55
CDH3-204ENST00000565453 AKR1C2P52895 323 aa11.61□□□□□ -0.55
CDH3-204ENST00000565453 MRPS10P82664 201 aaKnown RBP11.61□□□□□ -0.55
CDH3-204ENST00000565453 SSBP1Q04837 148 aaKnown RBP11.61□□□□□ -0.55
CDH3-204ENST00000565453 WFDC3Q8IUB2 231 aa11.61□□□□□ -0.55
CDH3-204ENST00000565453 CCDC71LQ8N9Z2 235 aa11.61□□□□□ -0.55
CDH3-204ENST00000565453 TMEM116Q8NCL8 245 aa11.61□□□□□ -0.55
CDH3-204ENST00000565453 MARCH1Q8TCQ1 289 aa11.61□□□□□ -0.55
CDH3-204ENST00000565453 PINX1Q96BK5 328 aaKnown RBP11.61□□□□□ -0.55
CDH3-204ENST00000565453 RHPN1-AS1Q9BWJ2 59 aa11.61□□□□□ -0.55
CDH3-204ENST00000565453 COPZ2Q9P299 210 aa11.61□□□□□ -0.55
CDH3-204ENST00000565453 ATG12O94817 140 aa11.6□□□□□ -0.55
CDH3-204ENST00000565453 RNASE2P10153 161 aaKnown RBP11.6□□□□□ -0.55
CDH3-204ENST00000565453 SCGB2B2Q4G0G5 96 aa11.6□□□□□ -0.55
CDH3-204ENST00000565453 FAM90A2PQ658T7 463 aa11.6□□□□□ -0.55
CDH3-204ENST00000565453 FAAP20Q6NZ36 180 aa11.6□□□□□ -0.55
CDH3-204ENST00000565453 SLC35G3Q8N808 338 aa11.6□□□□□ -0.55
CDH3-204ENST00000565453 SMIM4Q8WVI0 70 aa11.6□□□□□ -0.55
CDH3-204ENST00000565453 RTBDNQ9BSG5 229 aaPredicted RBP11.6□□□□□ -0.55
CDH3-204ENST00000565453 TP53TG1Q9Y2A0 90 aa11.6□□□□□ -0.55
CDH3-204ENST00000565453 IGHV3-49A0A0A0MS15 119 aa11.59□□□□□ -0.55
CDH3-204ENST00000565453 RGS5O15539 181 aa11.59□□□□□ -0.55
CDH3-204ENST00000565453 GNG7O60262 68 aa11.59□□□□□ -0.55
CDH3-204ENST00000565453 B3GALNT1O75752 331 aa11.59□□□□□ -0.55
CDH3-204ENST00000565453 YIF1AO95070 293 aa11.59□□□□□ -0.55
CDH3-204ENST00000565453 ETV6P41212 452 aa11.59□□□□□ -0.55
CDH3-204ENST00000565453 APOC4P55056 127 aa11.59□□□□□ -0.55
CDH3-204ENST00000565453 TRIM16LQ309B1 348 aa11.59□□□□□ -0.55
CDH3-204ENST00000565453 AARDQ4LEZ3 155 aa11.59□□□□□ -0.55
CDH3-204ENST00000565453 TOMM20LQ6UXN7 152 aa11.59□□□□□ -0.55
CDH3-204ENST00000565453 Q6ZRM9 215 aa11.59□□□□□ -0.55
CDH3-204ENST00000565453 Q6ZWC4 215 aa11.59□□□□□ -0.55
CDH3-204ENST00000565453 LHFPL5Q8TAF8 219 aa11.59□□□□□ -0.55
CDH3-204ENST00000565453 TRAV14DV4A0A0A6YYC5 116 aa11.58□□□□□ -0.56
CDH3-204ENST00000565453 KIR2DL5BA0A0G2JN68 375 aa11.58□□□□□ -0.56
CDH3-204ENST00000565453 KIR2DL5BA0A0G2JPC4 375 aa11.58□□□□□ -0.56
CDH3-204ENST00000565453 UBE2CO00762 179 aa11.58□□□□□ -0.56
CDH3-204ENST00000565453 CTDSPLO15194 276 aa11.58□□□□□ -0.56
CDH3-204ENST00000565453 CDS2O95674 445 aa11.58□□□□□ -0.56
CDH3-204ENST00000565453 IFNA17P01571 189 aa11.58□□□□□ -0.56
CDH3-204ENST00000565453 SNCAP37840 140 aa11.58□□□□□ -0.56
CDH3-204ENST00000565453 NPBWR1P48145 328 aa11.58□□□□□ -0.56
CDH3-204ENST00000565453 MEF2DQ14814 521 aa11.58□□□□□ -0.56
CDH3-204ENST00000565453 BSXQ3C1V8 233 aa11.58□□□□□ -0.56
CDH3-204ENST00000565453 CLVS1Q8IUQ0 354 aaPredicted RBP11.58□□□□□ -0.56
CDH3-204ENST00000565453 KIR2DL5AQ8N109 375 aa11.58□□□□□ -0.56
CDH3-204ENST00000565453 DUSP18Q8NEJ0 188 aa11.58□□□□□ -0.56
CDH3-204ENST00000565453 KIR2DL5BQ8NHK3 375 aa11.58□□□□□ -0.56
CDH3-204ENST00000565453 DYNC2LI1Q8TCX1 351 aa11.58□□□□□ -0.56
CDH3-204ENST00000565453 GLYATL2Q8WU03 294 aa11.58□□□□□ -0.56
CDH3-204ENST00000565453 TMEM222Q9H0R3 208 aa11.58□□□□□ -0.56
CDH3-204ENST00000565453 FNDC4Q9H6D8 234 aaPredicted RBP11.58□□□□□ -0.56
CDH3-204ENST00000565453 ZFAND3Q9H8U3 227 aa11.58□□□□□ -0.56
CDH3-204ENST00000565453 CCDC59Q9P031 241 aaKnown RBP11.58□□□□□ -0.56
CDH3-204ENST00000565453 MRPL36Q9P0J6 103 aaKnown RBP11.58□□□□□ -0.56
CDH3-204ENST00000565453 IGHV3OR16-13A0A075B7E8 117 aa11.57□□□□□ -0.56
CDH3-204ENST00000565453 IGHV3-74A0A0B4J1X5 117 aa11.57□□□□□ -0.56
CDH3-204ENST00000565453 SPRY2O43597 315 aa11.57□□□□□ -0.56
CDH3-204ENST00000565453 TMEM50AO95807 157 aa11.57□□□□□ -0.56
CDH3-204ENST00000565453 OR5AC1P0C628 307 aa11.57□□□□□ -0.56
CDH3-204ENST00000565453 HOXA1P49639 335 aaPredicted RBP11.57□□□□□ -0.56
CDH3-204ENST00000565453 SURF2Q15527 256 aaPredicted RBP11.57□□□□□ -0.56
CDH3-204ENST00000565453 DEFB135Q30KP9 77 aa11.57□□□□□ -0.56
CDH3-204ENST00000565453 LILRB2Q8N423 598 aa11.57□□□□□ -0.56
CDH3-204ENST00000565453 OR4C16Q8NGL9 310 aa11.57□□□□□ -0.56
CDH3-204ENST00000565453 RRNAD1Q96FB5 475 aaKnown RBP11.57□□□□□ -0.56
CDH3-204ENST00000565453 GALNT14Q96FL9 552 aa11.57□□□□□ -0.56
CDH3-204ENST00000565453 PDCD10Q9BUL8 212 aa11.57□□□□□ -0.56
CDH3-204ENST00000565453 VSIRQ9H7M9 311 aa11.57□□□□□ -0.56
CDH3-204ENST00000565453 NAA60Q9H7X0 242 aa11.57□□□□□ -0.56
CDH3-204ENST00000565453 MAP6D1Q9H9H5 199 aa11.57□□□□□ -0.56
CDH3-204ENST00000565453 GPR132Q9UNW8 380 aa11.57□□□□□ -0.56
CDH3-204ENST00000565453 TEX13DA0A0J9YY54 714 aaPredicted RBP11.56□□□□□ -0.56
CDH3-204ENST00000565453 A0A1B0GU03 582 aa11.56□□□□□ -0.56
CDH3-204ENST00000565453 DISC1C4P0D8 188 aa11.56□□□□□ -0.56
CDH3-204ENST00000565453 CORTO00230 105 aa11.56□□□□□ -0.56
CDH3-204ENST00000565453 APOHP02749 345 aaPredicted RBP11.56□□□□□ -0.56
CDH3-204ENST00000565453 AKAIN1P0CW23 69 aa11.56□□□□□ -0.56
CDH3-204ENST00000565453 RPL35AP18077 110 aaKnown RBP11.56□□□□□ -0.56
CDH3-204ENST00000565453 BMI1P35226 326 aa11.56□□□□□ -0.56
CDH3-204ENST00000565453 RPL5P46777 297 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms