RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 CORTO00230 105 aa9.04□□□□□ -0.96
GTF3C1-204ENST00000564664 YIF1AO95070 293 aa9.04□□□□□ -0.96
GTF3C1-204ENST00000564664 MT-CO2P00403 227 aa9.04□□□□□ -0.96
GTF3C1-204ENST00000564664 CTSDP07339 412 aaPredicted RBP9.04□□□□□ -0.96
GTF3C1-204ENST00000564664 SNCAP37840 140 aa9.04□□□□□ -0.96
GTF3C1-204ENST00000564664 NPBWR1P48145 328 aa9.04□□□□□ -0.96
GTF3C1-204ENST00000564664 PAFAH1B2P68402 229 aa9.04□□□□□ -0.96
GTF3C1-204ENST00000564664 CNPY1Q3B7I2 92 aa9.04□□□□□ -0.96
GTF3C1-204ENST00000564664 RNASE10Q5GAN6 216 aaKnown RBP9.04□□□□□ -0.96
GTF3C1-204ENST00000564664 LHFPL1Q86WI0 220 aa9.04□□□□□ -0.96
GTF3C1-204ENST00000564664 DUSP18Q8NEJ0 188 aa9.04□□□□□ -0.96
GTF3C1-204ENST00000564664 RNF183Q96D59 192 aa9.04□□□□□ -0.96
GTF3C1-204ENST00000564664 GINS3Q9BRX5 216 aa9.04□□□□□ -0.96
GTF3C1-204ENST00000564664 MTFP1Q9UDX5 166 aa9.04□□□□□ -0.96
GTF3C1-204ENST00000564664 GNG7O60262 68 aa9.03□□□□□ -0.96
GTF3C1-204ENST00000564664 PGAM2P15259 253 aa9.03□□□□□ -0.96
GTF3C1-204ENST00000564664 PIGPP57054 158 aa9.03□□□□□ -0.96
GTF3C1-204ENST00000564664 ODF3L2Q3SX64 289 aa9.03□□□□□ -0.96
GTF3C1-204ENST00000564664 TERB2Q8NHR7 220 aa9.03□□□□□ -0.96
GTF3C1-204ENST00000564664 MRGPRFQ96AM1 343 aa9.03□□□□□ -0.96
GTF3C1-204ENST00000564664 RNF2Q99496 336 aa9.03□□□□□ -0.96
GTF3C1-204ENST00000564664 MAP6D1Q9H9H5 199 aa9.03□□□□□ -0.96
GTF3C1-204ENST00000564664 KLK11Q9UBX7 282 aa9.03□□□□□ -0.96
GTF3C1-204ENST00000564664 C3orf85A0A1B0GTC6 90 aa9.02□□□□□ -0.97
GTF3C1-204ENST00000564664 NUPR2A6NF83 97 aa9.02□□□□□ -0.97
GTF3C1-204ENST00000564664 M0QYG6 137 aa9.02□□□□□ -0.97
GTF3C1-204ENST00000564664 ZNF207O43670 478 aaKnown RBP9.02□□□□□ -0.97
GTF3C1-204ENST00000564664 SCGB2A1O75556 95 aa9.02□□□□□ -0.97
GTF3C1-204ENST00000564664 P0C879 139 aa9.02□□□□□ -0.97
GTF3C1-204ENST00000564664 MRPS10P82664 201 aaKnown RBP9.02□□□□□ -0.97
GTF3C1-204ENST00000564664 SSBP1Q04837 148 aaKnown RBP9.02□□□□□ -0.97
GTF3C1-204ENST00000564664 CTF1Q16619 201 aa9.02□□□□□ -0.97
GTF3C1-204ENST00000564664 FAM90A2PQ658T7 463 aa9.02□□□□□ -0.97
GTF3C1-204ENST00000564664 PVRIGQ6DKI7 326 aa9.02□□□□□ -0.97
GTF3C1-204ENST00000564664 CCDC71LQ8N9Z2 235 aa9.02□□□□□ -0.97
GTF3C1-204ENST00000564664 TMEM229BQ8NBD8 167 aa9.02□□□□□ -0.97
GTF3C1-204ENST00000564664 PDCD10Q9BUL8 212 aa9.02□□□□□ -0.97
GTF3C1-204ENST00000564664 CSTL1Q9H114 145 aa9.02□□□□□ -0.97
GTF3C1-204ENST00000564664 COPZ2Q9P299 210 aa9.02□□□□□ -0.97
GTF3C1-204ENST00000564664 RABL2AQ9UBK7 228 aaPredicted RBP9.02□□□□□ -0.97
GTF3C1-204ENST00000564664 UBQLN2Q9UHD9 624 aa9.02□□□□□ -0.97
GTF3C1-204ENST00000564664 RABL2BQ9UNT1 228 aa9.02□□□□□ -0.97
GTF3C1-204ENST00000564664 TRAV2A0A0B4J234 112 aa9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 A0A0B4J293 547 aa9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 A0A0J9YWU9 116 aa9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 MPTX1A8MV57 137 aa9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 DFFBO76075 338 aa9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 GABARAPO95166 117 aa9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 TMEM50AO95807 157 aa9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 IFNA17P01571 189 aa9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 IGKV1-5P01602 117 aa9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 CD74P04233 296 aa9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 CD3DP04234 171 aa9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 TAS2R19P59542 299 aa9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 LCE2DQ5TA82 110 aaPredicted RBP9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 ZNF600Q6ZNG1 722 aa9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 LYG2Q86SG7 212 aa9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 FAM219AQ8IW50 185 aa9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 SLC35G3Q8N808 338 aa9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 OR52I2Q8NH67 350 aa9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 GATAD1Q8WUU5 269 aa9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 PINX1Q96BK5 328 aaKnown RBP9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 RRNAD1Q96FB5 475 aaKnown RBP9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 ZNF414Q96IQ9 312 aa9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 BCL7BQ9BQE9 202 aa9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 TMEM231Q9H6L2 316 aa9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 VSIRQ9H7M9 311 aa9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 ENY2Q9NPA8 101 aa9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 EXTL2Q9UBQ6 330 aa9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 CACFD1Q9UGQ2 172 aa9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 KLK5Q9Y337 293 aaPredicted RBP9.01□□□□□ -0.97
GTF3C1-204ENST00000564664 IGHV3OR16-8A0A075B7F1 116 aa9□□□□□ -0.97
GTF3C1-204ENST00000564664 A0A1W2PS18 150 aa9□□□□□ -0.97
GTF3C1-204ENST00000564664 UCP1P25874 307 aa9□□□□□ -0.97
GTF3C1-204ENST00000564664 AKR1C2P52895 323 aa9□□□□□ -0.97
GTF3C1-204ENST00000564664 DEFB135Q30KP9 77 aa9□□□□□ -0.97
GTF3C1-204ENST00000564664 GPR107Q5VW38 600 aa9□□□□□ -0.97
GTF3C1-204ENST00000564664 CEMP1Q6PRD7 247 aaPredicted RBP9□□□□□ -0.97
GTF3C1-204ENST00000564664 TOMM20LQ6UXN7 152 aa9□□□□□ -0.97
GTF3C1-204ENST00000564664 TP53RKQ96S44 253 aa9□□□□□ -0.97
GTF3C1-204ENST00000564664 ABHD1Q96SE0 405 aa9□□□□□ -0.97
GTF3C1-204ENST00000564664 RSL24D1Q9UHA3 163 aaKnown RBP9□□□□□ -0.97
GTF3C1-204ENST00000564664 TRAV30A0A087WSZ9 112 aa8.99□□□□□ -0.97
GTF3C1-204ENST00000564664 CXorf65A6NEN9 183 aa8.99□□□□□ -0.97
GTF3C1-204ENST00000564664 GABARAPH6UMI1 98 aa8.99□□□□□ -0.97
GTF3C1-204ENST00000564664 ST8SIA3O43173 380 aa8.99□□□□□ -0.97
GTF3C1-204ENST00000564664 CDS2O95674 445 aa8.99□□□□□ -0.97
GTF3C1-204ENST00000564664 RAB3DO95716 219 aa8.99□□□□□ -0.97
GTF3C1-204ENST00000564664 RPL35AP18077 110 aaKnown RBP8.99□□□□□ -0.97
GTF3C1-204ENST00000564664 PI3P19957 117 aa8.99□□□□□ -0.97
GTF3C1-204ENST00000564664 MEF2DQ14814 521 aa8.99□□□□□ -0.97
GTF3C1-204ENST00000564664 SURF2Q15527 256 aaPredicted RBP8.99□□□□□ -0.97
GTF3C1-204ENST00000564664 TRIM16LQ309B1 348 aa8.99□□□□□ -0.97
GTF3C1-204ENST00000564664 AARDQ4LEZ3 155 aa8.99□□□□□ -0.97
GTF3C1-204ENST00000564664 STEAP1BQ6NZ63 245 aa8.99□□□□□ -0.97
GTF3C1-204ENST00000564664 LINC00299Q6ZSB3 139 aa8.99□□□□□ -0.97
GTF3C1-204ENST00000564664 TCF24Q7RTU0 167 aa8.99□□□□□ -0.97
GTF3C1-204ENST00000564664 OR52E5Q8NH55 327 aa8.99□□□□□ -0.97
GTF3C1-204ENST00000564664 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.99□□□□□ -0.97
GTF3C1-204ENST00000564664 PLECQ15149 4684 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms