RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 PAPPAQ13219 1627 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 TRPM1Q7Z4N2 1603 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 PDE6DO43924 150 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 OR2J2O76002 312 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 OR7C1O76099 320 aaPredicted RBP1.31□□□□□ -2.2
CHD9-209ENST00000564255 ATG12O94817 140 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 APOMO95445 188 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 IGKV1-17P01599 117 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 P0C880 135 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 SMIM6P0DI80 62 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 ESDP10768 282 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 COX4I1P13073 169 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 ZNF22P17026 224 aaPredicted RBP1.31□□□□□ -2.2
CHD9-209ENST00000564255 ATP6V0CP27449 155 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 AKR1C3P42330 323 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 REG1BP48304 166 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 CTBP2P56545 445 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 HOXC5Q00444 222 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 PSG4Q00888 419 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 JOSD1Q15040 202 aaPredicted RBP1.31□□□□□ -2.2
CHD9-209ENST00000564255 CDK10Q15131 360 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 C1orf194Q5T5A4 169 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 TMEM78Q5T7P6 136 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 ALKAL1Q6UXT8 129 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 TCF24Q7RTU0 167 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 OR4K15Q8NH41 348 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 MFSD8Q8NHS3 518 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 IGF2BP2-AS1Q96M15 143 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 ENY2Q9NPA8 101 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 IDI2-AS1Q9NZ38 188 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 DOK5Q9P104 306 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 HEY1Q9Y5J3 304 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 CHD5Q8TDI0 1954 aa1.31□□□□□ -2.2
CHD9-209ENST00000564255 CDC42BPAQ5VT25 1732 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 PARP4Q9UKK3 1724 aaKnown RBP1.3□□□□□ -2.2
CHD9-209ENST00000564255 IGKV1D-17A0A075B6S4 117 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 TMED7-TICAM2A0A0A6YYA0 188 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 PQLC2LA1A4F0 135 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 DLEU1O43261 78 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 HTR1AP08908 422 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 SULT1A3P0DMM9 295 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 SULT1A4P0DMN0 295 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 SDC4P31431 198 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 GZMMP51124 257 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 RAB13P51153 203 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 RHOBP62745 196 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 RSU1Q15404 277 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 ACOT6Q3I5F7 207 aaPredicted RBP1.3□□□□□ -2.2
CHD9-209ENST00000564255 SBSNQ6UWP8 590 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 TOMM20LQ6UXN7 152 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 LRRC28Q86X40 367 aaPredicted RBP1.3□□□□□ -2.2
CHD9-209ENST00000564255 OR13C6PQ8NH95 151 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 CMTM2Q8TAZ6 248 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 FNDC9Q8TBE3 224 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 LMX1AQ8TE12 382 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 OR52B2Q96RD2 323 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 CCDC90BQ9GZT6 254 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 OPTCQ9UBM4 332 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 JPT1Q9UK76 154 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 SMG6Q86US8 1419 aaKnown RBP1.3□□□□□ -2.2
CHD9-209ENST00000564255 CASKIN1Q8WXD9 1431 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 PEAK1Q9H792 1746 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 MYH3P11055 1940 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 GPR179Q6PRD1 2367 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 DHRS12A0PJE2 317 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 OR4C46A6NHA9 309 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 TXNDC9O14530 226 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 ORC5O43913 435 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 PFDN1O60925 122 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 CDS2O95674 445 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 IFNGP01579 166 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 BPGMP07738 259 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 RBP1P09455 135 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 CCL3P10147 92 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 CD79AP11912 226 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 NPPCP23582 126 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 PPP1CCP36873 323 aaKnown RBP1.3□□□□□ -2.2
CHD9-209ENST00000564255 MARCKSL1P49006 195 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 TSPEAR-AS2P59090 65 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 TMEM128Q5BJH2 165 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 TEX36Q5VZQ5 186 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 BAP18Q8IXM2 172 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 ST6GALNAC3Q8NDV1 305 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 OR5J2Q8NH18 312 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 GRPEL2Q8TAA5 225 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 C1orf54Q8WWF1 131 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 OR8B2Q96RD0 313 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 HIGD2AQ9BW72 106 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 C16orf95Q9H693 158 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 COA4Q9NYJ1 87 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 SS18L2Q9UHA2 77 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 UTP11Q9Y3A2 253 aaKnown RBP1.3□□□□□ -2.2
CHD9-209ENST00000564255 ITGB4P16144 1822 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 LTBP2Q14767 1821 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 NALCNQ8IZF0 1738 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 NRXN3Q9Y4C0 1643 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 KDM6AO15550 1401 aaPredicted RBP1.3□□□□□ -2.2
CHD9-209ENST00000564255 EEA1Q15075 1411 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 VPS8Q8N3P4 1428 aa1.3□□□□□ -2.2
CHD9-209ENST00000564255 NLRC5Q86WI3 1866 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms