RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 MARCH1Q8TCQ1 289 aa11.17□□□□□ -0.62
SNX29-203ENST00000564111 MISP3Q96FF7 219 aa11.17□□□□□ -0.62
SNX29-203ENST00000564111 TMEM222Q9H0R3 208 aa11.17□□□□□ -0.62
SNX29-203ENST00000564111 IFNA17P01571 189 aa11.17□□□□□ -0.62
SNX29-203ENST00000564111 HOXA1P49639 335 aaPredicted RBP11.17□□□□□ -0.62
SNX29-203ENST00000564111 MUC7Q8TAX7 377 aa11.17□□□□□ -0.62
SNX29-203ENST00000564111 RBPMSQ93062 196 aaKnown RBP11.17□□□□□ -0.62
SNX29-203ENST00000564111 GINS3Q9BRX5 216 aa11.17□□□□□ -0.62
SNX29-203ENST00000564111 KCNIP3Q9Y2W7 256 aa11.17□□□□□ -0.62
SNX29-203ENST00000564111 CEPT1Q9Y6K0 416 aa11.17□□□□□ -0.62
SNX29-203ENST00000564111 RPS10-NUDT3A0A1W2PQS6 291 aa11.16□□□□□ -0.62
SNX29-203ENST00000564111 IGKV1-5P01602 117 aa11.16□□□□□ -0.62
SNX29-203ENST00000564111 HAGHQ16775 308 aa11.16□□□□□ -0.62
SNX29-203ENST00000564111 AARDQ4LEZ3 155 aa11.16□□□□□ -0.62
SNX29-203ENST00000564111 OR4C16Q8NGL9 310 aa11.16□□□□□ -0.62
SNX29-203ENST00000564111 FAM110AQ9BQ89 295 aa11.16□□□□□ -0.62
SNX29-203ENST00000564111 SLIRPQ9GZT3 109 aaKnown RBP11.16□□□□□ -0.62
SNX29-203ENST00000564111 SRD5A3Q9H8P0 318 aa11.16□□□□□ -0.62
SNX29-203ENST00000564111 MLXQ9UH92 298 aa11.16□□□□□ -0.62
SNX29-203ENST00000564111 FABP12A6NFH5 140 aa11.16□□□□□ -0.62
SNX29-203ENST00000564111 OR4C46A6NHA9 309 aa11.16□□□□□ -0.62
SNX29-203ENST00000564111 CRYM-AS1A6NIL9 109 aa11.16□□□□□ -0.62
SNX29-203ENST00000564111 OR11H12B2RN74 326 aa11.16□□□□□ -0.62
SNX29-203ENST00000564111 I3L2K1 104 aa11.16□□□□□ -0.62
SNX29-203ENST00000564111 ZNF701M0R085 212 aaPredicted RBP11.16□□□□□ -0.62
SNX29-203ENST00000564111 CDS2O95674 445 aa11.16□□□□□ -0.62
SNX29-203ENST00000564111 ANXA3P12429 323 aa11.16□□□□□ -0.62
SNX29-203ENST00000564111 PI3P19957 117 aa11.16□□□□□ -0.62
SNX29-203ENST00000564111 MFAP2P55001 183 aa11.16□□□□□ -0.62
SNX29-203ENST00000564111 SPCS3P61009 180 aa11.16□□□□□ -0.62
SNX29-203ENST00000564111 BTNL8Q6UX41 500 aa11.16□□□□□ -0.62
SNX29-203ENST00000564111 LINC00322Q6ZN03 302 aaPredicted RBP11.16□□□□□ -0.62
SNX29-203ENST00000564111 TMEM61Q8N0U2 210 aa11.16□□□□□ -0.62
SNX29-203ENST00000564111 TMEM231Q9H6L2 316 aa11.16□□□□□ -0.62
SNX29-203ENST00000564111 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.16□□□□□ -0.62
SNX29-203ENST00000564111 TSPAN4O14817 238 aa11.15□□□□□ -0.62
SNX29-203ENST00000564111 ST8SIA3O43173 380 aa11.15□□□□□ -0.62
SNX29-203ENST00000564111 GNG7O60262 68 aa11.15□□□□□ -0.62
SNX29-203ENST00000564111 S100A5P33763 92 aa11.15□□□□□ -0.62
SNX29-203ENST00000564111 TM4SF20Q53R12 229 aa11.15□□□□□ -0.62
SNX29-203ENST00000564111 PVRIGQ6DKI7 326 aa11.15□□□□□ -0.62
SNX29-203ENST00000564111 OR4D10Q8NGI6 311 aa11.15□□□□□ -0.62
SNX29-203ENST00000564111 GPR132Q9UNW8 380 aa11.15□□□□□ -0.62
SNX29-203ENST00000564111 DBX1A6NMT0 343 aa11.15□□□□□ -0.63
SNX29-203ENST00000564111 MT-CO2P00403 227 aa11.15□□□□□ -0.63
SNX29-203ENST00000564111 UNQ9165/PRO28630Q6UXU0 137 aa11.15□□□□□ -0.63
SNX29-203ENST00000564111 UBAC2Q8NBM4 344 aa11.15□□□□□ -0.63
SNX29-203ENST00000564111 CACNG8Q8WXS5 425 aa11.15□□□□□ -0.63
SNX29-203ENST00000564111 WDR89Q96FK6 387 aaPredicted RBP11.15□□□□□ -0.63
SNX29-203ENST00000564111 HTR2BP41595 481 aa11.14□□□□□ -0.63
SNX29-203ENST00000564111 GALNT14Q96FL9 552 aa11.14□□□□□ -0.63
SNX29-203ENST00000564111 SOSTQ9BQB4 213 aa11.14□□□□□ -0.63
SNX29-203ENST00000564111 GGTLC1Q9BX51 225 aa11.14□□□□□ -0.63
SNX29-203ENST00000564111 COL7A1Q02388 2944 aa11.14□□□□□ -0.63
SNX29-203ENST00000564111 TRAV30A0A087WSZ9 112 aa11.13□□□□□ -0.63
SNX29-203ENST00000564111 OR5AC1P0C628 307 aa11.13□□□□□ -0.63
SNX29-203ENST00000564111 LYL1P12980 280 aa11.13□□□□□ -0.63
SNX29-203ENST00000564111 RTBDNQ9BSG5 229 aaPredicted RBP11.13□□□□□ -0.63
SNX29-203ENST00000564111 TMEM56-RWDD3S4R434 201 aa11.13□□□□□ -0.63
SNX29-203ENST00000564111 A0A0B4J293 547 aa11.13□□□□□ -0.63
SNX29-203ENST00000564111 DUXBA0A1W2PPF3 345 aa11.13□□□□□ -0.63
SNX29-203ENST00000564111 F8W735 103 aaPredicted RBP11.13□□□□□ -0.63
SNX29-203ENST00000564111 CTSGP08311 255 aa11.13□□□□□ -0.63
SNX29-203ENST00000564111 TNFSF8P32971 234 aa11.13□□□□□ -0.63
SNX29-203ENST00000564111 ATP5IP56385 69 aaPredicted RBP11.13□□□□□ -0.63
SNX29-203ENST00000564111 ZNF600Q6ZNG1 722 aa11.13□□□□□ -0.63
SNX29-203ENST00000564111 OR10C1Q96KK4 312 aa11.13□□□□□ -0.63
SNX29-203ENST00000564111 C20orf24Q9BUV8 137 aa11.13□□□□□ -0.63
SNX29-203ENST00000564111 IGHV7-4-1A0A0J9YVY3 117 aa11.12□□□□□ -0.63
SNX29-203ENST00000564111 CCDC160A6NGH7 325 aa11.12□□□□□ -0.63
SNX29-203ENST00000564111 CD7P09564 240 aa11.12□□□□□ -0.63
SNX29-203ENST00000564111 APOC4P55056 127 aa11.12□□□□□ -0.63
SNX29-203ENST00000564111 ETFRF1Q6IPR1 90 aa11.12□□□□□ -0.63
SNX29-203ENST00000564111 TMEM116Q8NCL8 245 aa11.12□□□□□ -0.63
SNX29-203ENST00000564111 OR51S1Q8NGJ8 323 aa11.12□□□□□ -0.63
SNX29-203ENST00000564111 CHRDL1Q9BU40 450 aa11.12□□□□□ -0.63
SNX29-203ENST00000564111 SMPXQ9UHP9 88 aa11.12□□□□□ -0.63
SNX29-203ENST00000564111 LOC102724200A0A096LPH7 203 aaPredicted RBP11.12□□□□□ -0.63
SNX29-203ENST00000564111 UBE2CO00762 179 aa11.12□□□□□ -0.63
SNX29-203ENST00000564111 SLC25A4P12235 298 aa11.12□□□□□ -0.63
SNX29-203ENST00000564111 ADMP35318 185 aa11.12□□□□□ -0.63
SNX29-203ENST00000564111 SP6Q3SY56 376 aa11.12□□□□□ -0.63
SNX29-203ENST00000564111 SELENOHQ8IZQ5 122 aaKnown RBP11.12□□□□□ -0.63
SNX29-203ENST00000564111 DEFB125Q8N687 156 aa11.12□□□□□ -0.63
SNX29-203ENST00000564111 RNASEH2CQ8TDP1 164 aaKnown RBP11.12□□□□□ -0.63
SNX29-203ENST00000564111 NARS2Q96I59 477 aaKnown RBP11.12□□□□□ -0.63
SNX29-203ENST00000564111 TRAV2A0A0B4J234 112 aa11.11□□□□□ -0.63
SNX29-203ENST00000564111 SULT1A3P0DMM9 295 aa11.11□□□□□ -0.63
SNX29-203ENST00000564111 SULT1A4P0DMN0 295 aa11.11□□□□□ -0.63
SNX29-203ENST00000564111 RNASE2P10153 161 aaKnown RBP11.11□□□□□ -0.63
SNX29-203ENST00000564111 PAFAH1B2P68402 229 aa11.11□□□□□ -0.63
SNX29-203ENST00000564111 BSXQ3C1V8 233 aa11.11□□□□□ -0.63
SNX29-203ENST00000564111 TMEM268Q5VZI3 342 aa11.11□□□□□ -0.63
SNX29-203ENST00000564111 GLYATL2Q8WU03 294 aa11.11□□□□□ -0.63
SNX29-203ENST00000564111 PINX1Q96BK5 328 aaKnown RBP11.11□□□□□ -0.63
SNX29-203ENST00000564111 MCUBQ9NWR8 336 aa11.11□□□□□ -0.63
SNX29-203ENST00000564111 SCAF4O95104 1147 aaKnown RBP11.11□□□□□ -0.63
SNX29-203ENST00000564111 CCR6P51684 374 aa11.11□□□□□ -0.63
SNX29-203ENST00000564111 PYDC2Q56P42 97 aa11.11□□□□□ -0.63
SNX29-203ENST00000564111 LGI3Q8N145 548 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms