RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 RNASEKQ6P5S7 137 aaKnown RBP9.73□□□□□ -0.85
ABCA3-203ENST00000563623 MDS2Q8NDY4 140 aa9.73□□□□□ -0.85
ABCA3-203ENST00000563623 ITLN1Q8WWA0 313 aa9.73□□□□□ -0.85
ABCA3-203ENST00000563623 LOXL4Q96JB6 756 aa9.73□□□□□ -0.85
ABCA3-203ENST00000563623 RCHY1Q96PM5 261 aa9.73□□□□□ -0.85
ABCA3-203ENST00000563623 DSPP15924 2871 aaKnown RBP9.72□□□□□ -0.85
ABCA3-203ENST00000563623 SAA2-SAA4A0A096LPE2 208 aa9.72□□□□□ -0.85
ABCA3-203ENST00000563623 TRAV5A0A0B4J249 113 aa9.72□□□□□ -0.85
ABCA3-203ENST00000563623 A0A1W2PNU3 283 aaPredicted RBP9.72□□□□□ -0.85
ABCA3-203ENST00000563623 AHRRA9YTQ3 701 aa9.72□□□□□ -0.85
ABCA3-203ENST00000563623 APCSP02743 223 aa9.72□□□□□ -0.85
ABCA3-203ENST00000563623 SAA2P0DJI9 122 aaPredicted RBP9.72□□□□□ -0.85
ABCA3-203ENST00000563623 REG1BP48304 166 aa9.72□□□□□ -0.85
ABCA3-203ENST00000563623 Q56UQ5 140 aa9.72□□□□□ -0.85
ABCA3-203ENST00000563623 LCN12Q6JVE5 192 aa9.72□□□□□ -0.85
ABCA3-203ENST00000563623 TRGV10A0A0A0MS01 117 aa9.72□□□□□ -0.85
ABCA3-203ENST00000563623 A0A1W2PN81 502 aa9.72□□□□□ -0.85
ABCA3-203ENST00000563623 C15orf61A6NNL5 157 aa9.72□□□□□ -0.85
ABCA3-203ENST00000563623 M0R296 226 aa9.72□□□□□ -0.85
ABCA3-203ENST00000563623 PLXNB1O43157 2135 aa9.72□□□□□ -0.85
ABCA3-203ENST00000563623 TDGF1P13385 188 aa9.72□□□□□ -0.85
ABCA3-203ENST00000563623 MZT1Q08AG7 82 aa9.72□□□□□ -0.85
ABCA3-203ENST00000563623 OCIAD2Q56VL3 154 aa9.72□□□□□ -0.85
ABCA3-203ENST00000563623 C9orf106Q8NAJ2 232 aa9.72□□□□□ -0.85
ABCA3-203ENST00000563623 SMIM12Q96EX1 92 aa9.72□□□□□ -0.85
ABCA3-203ENST00000563623 IFI27L2Q9H2X8 130 aa9.72□□□□□ -0.85
ABCA3-203ENST00000563623 RNF114Q9Y508 228 aa9.72□□□□□ -0.85
ABCA3-203ENST00000563623 GPX1P07203 203 aa9.71□□□□□ -0.85
ABCA3-203ENST00000563623 OR4B1Q8NGF8 309 aa9.71□□□□□ -0.85
ABCA3-203ENST00000563623 PRR7Q8TB68 274 aa9.71□□□□□ -0.85
ABCA3-203ENST00000563623 C20orf144Q9BQM9 153 aa9.71□□□□□ -0.85
ABCA3-203ENST00000563623 ZNF355PQ9NSJ1 428 aa9.71□□□□□ -0.85
ABCA3-203ENST00000563623 LAMTOR2Q9Y2Q5 125 aa9.71□□□□□ -0.85
ABCA3-203ENST00000563623 V9GYV3 84 aa9.71□□□□□ -0.85
ABCA3-203ENST00000563623 TET2Q6N021 2002 aaPredicted RBP9.71□□□□□ -0.85
ABCA3-203ENST00000563623 IGHV2OR16-5A0A0B4J2B6 119 aa9.71□□□□□ -0.85
ABCA3-203ENST00000563623 H0Y8G0 127 aa9.71□□□□□ -0.85
ABCA3-203ENST00000563623 GPR6P46095 362 aaPredicted RBP9.71□□□□□ -0.85
ABCA3-203ENST00000563623 PRRX1P54821 245 aa9.71□□□□□ -0.85
ABCA3-203ENST00000563623 LINC00310P59036 64 aa9.71□□□□□ -0.85
ABCA3-203ENST00000563623 CT45A1Q5HYN5 189 aa9.71□□□□□ -0.85
ABCA3-203ENST00000563623 DUX4L9Q6RFH8 374 aaPredicted RBP9.71□□□□□ -0.85
ABCA3-203ENST00000563623 LHFPL4Q7Z7J7 247 aa9.71□□□□□ -0.85
ABCA3-203ENST00000563623 ZNF439Q8NDP4 499 aa9.71□□□□□ -0.85
ABCA3-203ENST00000563623 CT45A3Q8NHU0 189 aa9.71□□□□□ -0.85
ABCA3-203ENST00000563623 CCL13Q99616 98 aa9.71□□□□□ -0.85
ABCA3-203ENST00000563623 COMMD5Q9GZQ3 224 aa9.71□□□□□ -0.85
ABCA3-203ENST00000563623 CST9LQ9H4G1 147 aa9.71□□□□□ -0.85
ABCA3-203ENST00000563623 YPEL1O60688 119 aa9.71□□□□□ -0.86
ABCA3-203ENST00000563623 SPRNQ5BIV9 151 aa9.71□□□□□ -0.86
ABCA3-203ENST00000563623 TEX43Q6ZNM6 134 aa9.71□□□□□ -0.86
ABCA3-203ENST00000563623 OR10W1Q8NGF6 305 aa9.71□□□□□ -0.86
ABCA3-203ENST00000563623 BLNKQ8WV28 456 aa9.71□□□□□ -0.86
ABCA3-203ENST00000563623 YPEL2Q96QA6 119 aa9.71□□□□□ -0.86
ABCA3-203ENST00000563623 ZFHX2Q9C0A1 2572 aaPredicted RBP9.71□□□□□ -0.86
ABCA3-203ENST00000563623 NKX2-8O15522 239 aa9.7□□□□□ -0.86
ABCA3-203ENST00000563623 COX7A2P2O60397 106 aa9.7□□□□□ -0.86
ABCA3-203ENST00000563623 PSG1P11464 419 aa9.7□□□□□ -0.86
ABCA3-203ENST00000563623 KIR2DS2P43631 304 aa9.7□□□□□ -0.86
ABCA3-203ENST00000563623 COMPP49747 757 aaPredicted RBP9.7□□□□□ -0.86
ABCA3-203ENST00000563623 PROCRQ9UNN8 238 aa9.7□□□□□ -0.86
ABCA3-203ENST00000563623 TNRC6BQ9UPQ9 1833 aaKnown RBP9.7□□□□□ -0.86
ABCA3-203ENST00000563623 PCSK5Q92824 1860 aa9.7□□□□□ -0.86
ABCA3-203ENST00000563623 DPRXA6NFQ7 191 aa9.7□□□□□ -0.86
ABCA3-203ENST00000563623 RTL8BQ17RB0 113 aa9.7□□□□□ -0.86
ABCA3-203ENST00000563623 C1orf229Q6ZS94 237 aaPredicted RBP9.7□□□□□ -0.86
ABCA3-203ENST00000563623 GCSAMQ8N6F7 178 aa9.7□□□□□ -0.86
ABCA3-203ENST00000563623 ORAOV1Q8WV07 137 aa9.7□□□□□ -0.86
ABCA3-203ENST00000563623 SSBP4Q9BWG4 385 aaPredicted RBP9.7□□□□□ -0.86
ABCA3-203ENST00000563623 APELAP0DMC3 54 aa9.7□□□□□ -0.86
ABCA3-203ENST00000563623 RBMXL3Q8N7X1 1067 aaKnown RBP9.7□□□□□ -0.86
ABCA3-203ENST00000563623 OR52E5Q8NH55 327 aa9.7□□□□□ -0.86
ABCA3-203ENST00000563623 GNB1LQ9BYB4 327 aa9.7□□□□□ -0.86
ABCA3-203ENST00000563623 IDI2-AS1Q9NZ38 188 aa9.7□□□□□ -0.86
ABCA3-203ENST00000563623 M0R2Z0 102 aa9.69□□□□□ -0.86
ABCA3-203ENST00000563623 TOX4O94842 621 aa9.69□□□□□ -0.86
ABCA3-203ENST00000563623 MT-ND6P03923 174 aa9.69□□□□□ -0.86
ABCA3-203ENST00000563623 AMY1AP04745 511 aa9.69□□□□□ -0.86
ABCA3-203ENST00000563623 C3orf79P0CE67 100 aa9.69□□□□□ -0.86
ABCA3-203ENST00000563623 PYYP10082 97 aa9.69□□□□□ -0.86
ABCA3-203ENST00000563623 KIR2DL2P43627 348 aaPredicted RBP9.69□□□□□ -0.86
ABCA3-203ENST00000563623 STUMQ69YW2 141 aa9.69□□□□□ -0.86
ABCA3-203ENST00000563623 OR2T6Q8NHC8 308 aa9.69□□□□□ -0.86
ABCA3-203ENST00000563623 IGHV1-18A0A0C4DH31 117 aa9.69□□□□□ -0.86
ABCA3-203ENST00000563623 A0A1W2PS18 150 aa9.69□□□□□ -0.86
ABCA3-203ENST00000563623 C9JCJ5 164 aa9.69□□□□□ -0.86
ABCA3-203ENST00000563623 H3BTX0 84 aa9.69□□□□□ -0.86
ABCA3-203ENST00000563623 SELENOVP59797 346 aa9.69□□□□□ -0.86
ABCA3-203ENST00000563623 SRSF6Q13247 344 aaKnown RBP9.69□□□□□ -0.86
ABCA3-203ENST00000563623 OR5B3Q8NH48 314 aa9.69□□□□□ -0.86
ABCA3-203ENST00000563623 KCNS1Q96KK3 526 aa9.69□□□□□ -0.86
ABCA3-203ENST00000563623 UQCR10Q9UDW1 63 aa9.69□□□□□ -0.86
ABCA3-203ENST00000563623 CDC42EP3Q9UKI2 254 aa9.69□□□□□ -0.86
ABCA3-203ENST00000563623 PRNDQ9UKY0 176 aa9.69□□□□□ -0.86
ABCA3-203ENST00000563623 LSM4Q9Y4Z0 139 aaKnown RBP9.69□□□□□ -0.86
ABCA3-203ENST00000563623 ZNF891A8MT65 544 aaPredicted RBP9.69□□□□□ -0.86
ABCA3-203ENST00000563623 ZNF324O75467 553 aaPredicted RBP9.69□□□□□ -0.86
ABCA3-203ENST00000563623 LINC00869P0C866 280 aa9.69□□□□□ -0.86
ABCA3-203ENST00000563623 BHLHA15Q7RTS1 189 aaPredicted RBP9.69□□□□□ -0.86
ABCA3-203ENST00000563623 TRAV9-1A0A075B6T8 112 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms