RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 SSBP4Q9BWG4 385 aaPredicted RBP6.28□□□□□ -1.4
TCF4-216ENST00000562680 COX11Q9Y6N1 276 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 NUP210LQ5VU65 1888 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 DOCK7Q96N67 2140 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 E7EQL1 145 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 HKR1P10072 659 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 PMCHP20382 165 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 SRSF4Q08170 494 aaKnown RBP6.28□□□□□ -1.4
TCF4-216ENST00000562680 SMIM20Q8N5G0 67 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 HIST1H2BLQ99880 126 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 JKAMPQ9P055 326 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 ANAPC10Q9UM13 185 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 CDKN1AP38936 164 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 ARL16Q0P5N6 197 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 GCSAMLQ5JQS6 135 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 LHFPL4Q7Z7J7 247 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 OR1N2Q8NGR9 330 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 PKDREJQ9NTG1 2253 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 ZNF785A8K8V0 405 aa6.27□□□□□ -1.41
TCF4-216ENST00000562680 SLC25A16P16260 332 aa6.27□□□□□ -1.41
TCF4-216ENST00000562680 RPS20P60866 119 aaKnown RBP6.27□□□□□ -1.41
TCF4-216ENST00000562680 RBX1P62877 108 aa6.27□□□□□ -1.41
TCF4-216ENST00000562680 RPRMLQ8N4K4 120 aa6.27□□□□□ -1.41
TCF4-216ENST00000562680 C1orf147Q96MC9 270 aaPredicted RBP6.27□□□□□ -1.41
TCF4-216ENST00000562680 FUT9Q9Y231 359 aa6.27□□□□□ -1.41
TCF4-216ENST00000562680 UBE2L3P68036 154 aaKnown RBP6.27□□□□□ -1.41
TCF4-216ENST00000562680 MINOS1Q5TGZ0 78 aa6.27□□□□□ -1.41
TCF4-216ENST00000562680 WDR25Q64LD2 544 aaPredicted RBP6.27□□□□□ -1.41
TCF4-216ENST00000562680 PRDM13Q9H4Q3 707 aa6.27□□□□□ -1.41
TCF4-216ENST00000562680 PGPEP1Q9NXJ5 209 aa6.27□□□□□ -1.41
TCF4-216ENST00000562680 MINOS1-NBL1R4GNA1 71 aa6.27□□□□□ -1.41
TCF4-216ENST00000562680 CXorf1O96002 111 aa6.27□□□□□ -1.41
TCF4-216ENST00000562680 GAGE5Q13069 117 aa6.27□□□□□ -1.41
TCF4-216ENST00000562680 GAGE6Q13070 117 aa6.27□□□□□ -1.41
TCF4-216ENST00000562680 TAF15Q92804 592 aaKnown RBP eCLIP6.27□□□□□ -1.41
TCF4-216ENST00000562680 ZNF479Q96JC4 524 aa6.27□□□□□ -1.41
TCF4-216ENST00000562680 SLC25A22Q9H936 323 aa6.27□□□□□ -1.41
TCF4-216ENST00000562680 MBNL3Q9NUK0 354 aaKnown RBP6.27□□□□□ -1.41
TCF4-216ENST00000562680 TRAV26-1A0A087WT03 109 aa6.27□□□□□ -1.41
TCF4-216ENST00000562680 GAGE12BA1L429 117 aa6.27□□□□□ -1.41
TCF4-216ENST00000562680 PSPNO60542 156 aa6.27□□□□□ -1.41
TCF4-216ENST00000562680 PLA2G5P39877 138 aa6.27□□□□□ -1.41
TCF4-216ENST00000562680 FBXL19-AS1Q494R0 122 aa6.27□□□□□ -1.41
TCF4-216ENST00000562680 RPL39P5Q59GN2 51 aa6.27□□□□□ -1.41
TCF4-216ENST00000562680 ZNF737O75373 536 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 PSG1P11464 419 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 ERVK11-1P61568 191 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 LYZP61626 148 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 C10orf113Q5VZT2 155 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 SLC35E3Q7Z769 313 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 CD177Q8N6Q3 437 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 DCTN5Q9BTE1 182 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 GTF3C1Q12789 2109 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 MED13Q9UHV7 2174 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 A1L4Q6 167 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 RBFOX3A6NFN3 312 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 CHEK1O14757 476 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 HYPMO75409 117 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 MOSP00540 346 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 IGHV2-5P01817 119 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 PQLC2Q6ZP29 291 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 ERASQ7Z444 233 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 BPIFA4PQ86YQ2 179 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 TEX45Q8NA69 505 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 OR4X1Q8NH49 305 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 CACNG8Q8WXS5 425 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 C18orf12Q96KH6 178 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 GAFA1Q96PS6 74 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 HSPB9Q9BQS6 159 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 CRIM1Q9NZV1 1036 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 IGHV3-72A0A0B4J1Y9 119 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 IGKV1D-13A0A0B4J2D9 117 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 C17orf98A8MV24 154 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 LILRA1O75019 489 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 IGKV1-13P0DP09 117 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 CRISP2P16562 243 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 DUTP33316 252 aaKnown RBP6.26□□□□□ -1.41
TCF4-216ENST00000562680 AMTP48728 403 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 OR4D5Q8NGN0 318 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 LEAP2Q969E1 77 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 UFC1Q9Y3C8 167 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 CCL3L1P16619 93 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 ZFAND6Q6FIF0 208 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 BIVMQ86UB2 503 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 PTPRQQ9UMZ3 2332 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 SAA2-SAA4A0A096LPE2 208 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 SAA2P0DJI9 122 aaPredicted RBP6.26□□□□□ -1.41
TCF4-216ENST00000562680 EGR1P18146 543 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 ECSCRQ19T08 205 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 UNQ5815/PRO19632Q6UWF5 114 aa6.26□□□□□ -1.41
TCF4-216ENST00000562680 MRPL20Q9BYC9 149 aaKnown RBP6.26□□□□□ -1.41
TCF4-216ENST00000562680 IGKV1D-8A0A087WSZ0 117 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 HIST1H2BKO60814 126 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 SNCGO76070 127 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 HIST1H2BJP06899 126 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 HIST1H2BOP23527 126 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 HIST1H2BBP33778 126 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 HIST1H2BDP58876 126 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 HIST1H2BCP62807 126 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 HIST2H2BEQ16778 126 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms