RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 NDUFA4L2Q9NRX3 87 aa6.18□□□□□ -1.42
GINS3-204ENST00000561952 C21orf62Q9NYP8 219 aa6.18□□□□□ -1.42
GINS3-204ENST00000561952 UFC1Q9Y3C8 167 aa6.18□□□□□ -1.42
GINS3-204ENST00000561952 F11RQ9Y624 299 aaKnown RBP6.18□□□□□ -1.42
GINS3-204ENST00000561952 ALMS1Q8TCU4 4167 aa6.18□□□□□ -1.42
GINS3-204ENST00000561952 PLECQ15149 4684 aaKnown RBP6.17□□□□□ -1.42
GINS3-204ENST00000561952 IGKV3-7A0A075B6H7 116 aa6.17□□□□□ -1.42
GINS3-204ENST00000561952 IGHV3-49A0A0A0MS15 119 aa6.17□□□□□ -1.42
GINS3-204ENST00000561952 LCE6AA0A183 80 aa6.17□□□□□ -1.42
GINS3-204ENST00000561952 C15orf61A6NNL5 157 aa6.17□□□□□ -1.42
GINS3-204ENST00000561952 IGKV1-39P01597 117 aa6.17□□□□□ -1.42
GINS3-204ENST00000561952 IGKV1D-39P04432 117 aa6.17□□□□□ -1.42
GINS3-204ENST00000561952 H2AFB1P0C5Y9 115 aa6.17□□□□□ -1.42
GINS3-204ENST00000561952 H2AFB2P0C5Z0 115 aa6.17□□□□□ -1.42
GINS3-204ENST00000561952 BCAP31P51572 246 aa6.17□□□□□ -1.42
GINS3-204ENST00000561952 ASAH1Q13510 395 aa6.17□□□□□ -1.42
GINS3-204ENST00000561952 BAK1Q16611 211 aa6.17□□□□□ -1.42
GINS3-204ENST00000561952 THOC7Q6I9Y2 204 aaKnown RBP6.17□□□□□ -1.42
GINS3-204ENST00000561952 LINC00322Q6ZN03 302 aaPredicted RBP6.17□□□□□ -1.42
GINS3-204ENST00000561952 H2BFWTQ7Z2G1 175 aa6.17□□□□□ -1.42
GINS3-204ENST00000561952 VN1R17PQ8TDU5 208 aa6.17□□□□□ -1.42
GINS3-204ENST00000561952 SCARB1Q8WTV0 552 aa6.17□□□□□ -1.42
GINS3-204ENST00000561952 TMEM190Q8WZ59 177 aa6.17□□□□□ -1.42
GINS3-204ENST00000561952 TMEM56Q96MV1 263 aa6.17□□□□□ -1.42
GINS3-204ENST00000561952 GGTLC1Q9BX51 225 aa6.17□□□□□ -1.42
GINS3-204ENST00000561952 ZNF436Q9C0F3 470 aaPredicted RBP6.17□□□□□ -1.42
GINS3-204ENST00000561952 EXTL2Q9UBQ6 330 aa6.17□□□□□ -1.42
GINS3-204ENST00000561952 PRNDQ9UKY0 176 aa6.17□□□□□ -1.42
GINS3-204ENST00000561952 TBC1D24Q9ULP9 559 aa6.17□□□□□ -1.42
GINS3-204ENST00000561952 IGHV3OR16-13A0A075B7E8 117 aa6.16□□□□□ -1.42
GINS3-204ENST00000561952 LOC102724200A0A096LPH7 203 aaPredicted RBP6.16□□□□□ -1.42
GINS3-204ENST00000561952 IGHV3-74A0A0B4J1X5 117 aa6.16□□□□□ -1.42
GINS3-204ENST00000561952 F8W735 103 aaPredicted RBP6.16□□□□□ -1.42
GINS3-204ENST00000561952 K7EIM0 57 aa6.16□□□□□ -1.42
GINS3-204ENST00000561952 YIF1AO95070 293 aa6.16□□□□□ -1.42
GINS3-204ENST00000561952 RPL35AP18077 110 aaKnown RBP6.16□□□□□ -1.42
GINS3-204ENST00000561952 TFPI2P48307 235 aa6.16□□□□□ -1.42
GINS3-204ENST00000561952 AKR1C2P52895 323 aa6.16□□□□□ -1.42
GINS3-204ENST00000561952 PMS2P11Q13670 270 aa6.16□□□□□ -1.42
GINS3-204ENST00000561952 KLK9Q2XQG4 91 aa6.16□□□□□ -1.42
GINS3-204ENST00000561952 ANKRD55Q3KP44 614 aa6.16□□□□□ -1.42
GINS3-204ENST00000561952 HSD17B13Q7Z5P4 300 aaPredicted RBP6.16□□□□□ -1.42
GINS3-204ENST00000561952 SLC38A6Q8IZM9 456 aa6.16□□□□□ -1.42
GINS3-204ENST00000561952 OR52I2Q8NH67 350 aa6.16□□□□□ -1.42
GINS3-204ENST00000561952 CHAC2Q8WUX2 184 aa6.16□□□□□ -1.42
GINS3-204ENST00000561952 MARC2Q969Z3 335 aa6.16□□□□□ -1.42
GINS3-204ENST00000561952 BSCL2Q96G97 398 aaPredicted RBP6.16□□□□□ -1.42
GINS3-204ENST00000561952 SEC22AQ96IW7 307 aa6.16□□□□□ -1.42
GINS3-204ENST00000561952 SCPEP1Q9HB40 452 aa6.16□□□□□ -1.42
GINS3-204ENST00000561952 TMEM14BQ9NUH8 114 aa6.16□□□□□ -1.42
GINS3-204ENST00000561952 MRPL27Q9P0M9 148 aaKnown RBP6.16□□□□□ -1.42
GINS3-204ENST00000561952 KLK11Q9UBX7 282 aa6.16□□□□□ -1.42
GINS3-204ENST00000561952 KLK9Q9UKQ9 250 aa6.16□□□□□ -1.42
GINS3-204ENST00000561952 NDUFA4O00483 81 aa6.15□□□□□ -1.42
GINS3-204ENST00000561952 CTDSPLO15194 276 aa6.15□□□□□ -1.42
GINS3-204ENST00000561952 PLA2G10O15496 165 aa6.15□□□□□ -1.42
GINS3-204ENST00000561952 GSTZ1O43708 216 aaPredicted RBP6.15□□□□□ -1.42
GINS3-204ENST00000561952 CD3DP04234 171 aa6.15□□□□□ -1.42
GINS3-204ENST00000561952 CTSDP07339 412 aaPredicted RBP6.15□□□□□ -1.42
GINS3-204ENST00000561952 C8orf88P0DMB2 117 aa6.15□□□□□ -1.42
GINS3-204ENST00000561952 ADMP35318 185 aa6.15□□□□□ -1.42
GINS3-204ENST00000561952 ELLP55199 621 aaPredicted RBP6.15□□□□□ -1.42
GINS3-204ENST00000561952 PIGPP57054 158 aa6.15□□□□□ -1.42
GINS3-204ENST00000561952 DEFB135Q30KP9 77 aa6.15□□□□□ -1.42
GINS3-204ENST00000561952 SP6Q3SY56 376 aa6.15□□□□□ -1.42
GINS3-204ENST00000561952 SCGB2B2Q4G0G5 96 aa6.15□□□□□ -1.42
GINS3-204ENST00000561952 PYDC2Q56P42 97 aa6.15□□□□□ -1.42
GINS3-204ENST00000561952 RNASE10Q5GAN6 216 aaKnown RBP6.15□□□□□ -1.42
GINS3-204ENST00000561952 LAMTOR1Q6IAA8 161 aa6.15□□□□□ -1.42
GINS3-204ENST00000561952 FAAP20Q6NZ36 180 aa6.15□□□□□ -1.42
GINS3-204ENST00000561952 LPCAT3Q6P1A2 487 aa6.15□□□□□ -1.42
GINS3-204ENST00000561952 OR2C3Q8N628 320 aa6.15□□□□□ -1.42
GINS3-204ENST00000561952 SLC35G3Q8N808 338 aa6.15□□□□□ -1.42
GINS3-204ENST00000561952 OR4D10Q8NGI6 311 aa6.15□□□□□ -1.42
GINS3-204ENST00000561952 OR5B3Q8NH48 314 aa6.15□□□□□ -1.42
GINS3-204ENST00000561952 RNASE11Q8TAA1 199 aaKnown RBP6.15□□□□□ -1.42
GINS3-204ENST00000561952 DAZ1Q9NQZ3 744 aaKnown RBP6.15□□□□□ -1.42
GINS3-204ENST00000561952 FKBP11Q9NYL4 201 aa6.15□□□□□ -1.42
GINS3-204ENST00000561952 hCG_2014768A0A024R1R8 64 aa6.14□□□□□ -1.43
GINS3-204ENST00000561952 TRAV25A0A0B4J276 109 aa6.14□□□□□ -1.43
GINS3-204ENST00000561952 IGHV3-66A0A0C4DH42 116 aa6.14□□□□□ -1.43
GINS3-204ENST00000561952 NUPL2O15504 423 aaKnown RBP6.14□□□□□ -1.43
GINS3-204ENST00000561952 PFDN1O60925 122 aa6.14□□□□□ -1.43
GINS3-204ENST00000561952 MT-CO2P00403 227 aa6.14□□□□□ -1.43
GINS3-204ENST00000561952 IFNA17P01571 189 aa6.14□□□□□ -1.43
GINS3-204ENST00000561952 FGF2P09038 288 aa6.14□□□□□ -1.43
GINS3-204ENST00000561952 HOXA1P49639 335 aaPredicted RBP6.14□□□□□ -1.43
GINS3-204ENST00000561952 MFAP4P55083 255 aa6.14□□□□□ -1.43
GINS3-204ENST00000561952 PRCDQ00LT1 54 aa6.14□□□□□ -1.43
GINS3-204ENST00000561952 TNP2Q05952 138 aa6.14□□□□□ -1.43
GINS3-204ENST00000561952 IL18Q14116 193 aa6.14□□□□□ -1.43
GINS3-204ENST00000561952 ZNF124Q15973 351 aa6.14□□□□□ -1.43
GINS3-204ENST00000561952 SPSB3Q6PJ21 355 aa6.14□□□□□ -1.43
GINS3-204ENST00000561952 APRG1Q8IVJ8 170 aa6.14□□□□□ -1.43
GINS3-204ENST00000561952 CADM3Q8N126 398 aa6.14□□□□□ -1.43
GINS3-204ENST00000561952 GBGT1Q8N5D6 347 aa6.14□□□□□ -1.43
GINS3-204ENST00000561952 DUSP18Q8NEJ0 188 aa6.14□□□□□ -1.43
GINS3-204ENST00000561952 OR1P1Q8NH06 330 aa6.14□□□□□ -1.43
GINS3-204ENST00000561952 TRIM63Q969Q1 353 aa6.14□□□□□ -1.43
GINS3-204ENST00000561952 TP53RKQ96S44 253 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms