RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 SOD1P00441 154 aa2.76□□□□□ -1.97
SMG1-204ENST00000561940 IGHV3-30-3P0DP02 117 aa2.76□□□□□ -1.97
SMG1-204ENST00000561940 CBR1P16152 277 aa2.76□□□□□ -1.97
SMG1-204ENST00000561940 CXCL2P19875 107 aa2.76□□□□□ -1.97
SMG1-204ENST00000561940 CXCL3P19876 107 aa2.76□□□□□ -1.97
SMG1-204ENST00000561940 PTRHD1Q6GMV3 140 aaKnown RBP2.76□□□□□ -1.97
SMG1-204ENST00000561940 LCN8Q6JVE9 175 aa2.76□□□□□ -1.97
SMG1-204ENST00000561940 TNFAIP8L2Q6P589 184 aaPredicted RBP2.76□□□□□ -1.97
SMG1-204ENST00000561940 CCDC112Q8NEF3 446 aa2.76□□□□□ -1.97
SMG1-204ENST00000561940 SLC37A2Q8TED4 501 aa2.76□□□□□ -1.97
SMG1-204ENST00000561940 UPK3BQ9BT76 320 aa2.76□□□□□ -1.97
SMG1-204ENST00000561940 DDA1Q9BW61 102 aa2.76□□□□□ -1.97
SMG1-204ENST00000561940 FBXL12Q9NXK8 326 aa2.76□□□□□ -1.97
SMG1-204ENST00000561940 HEY1Q9Y5J3 304 aa2.76□□□□□ -1.97
SMG1-204ENST00000561940 CSMD2Q7Z408 3487 aa2.76□□□□□ -1.97
SMG1-204ENST00000561940 MYO18AQ92614 2054 aaKnown RBP2.76□□□□□ -1.97
SMG1-204ENST00000561940 NUMA1Q14980 2115 aa2.75□□□□□ -1.97
SMG1-204ENST00000561940 ZFC3H1O60293 1989 aaKnown RBP2.75□□□□□ -1.97
SMG1-204ENST00000561940 LRRN3E7EW58 273 aa2.75□□□□□ -1.97
SMG1-204ENST00000561940 J3QRE1 110 aa2.75□□□□□ -1.97
SMG1-204ENST00000561940 MRASO14807 208 aa2.75□□□□□ -1.97
SMG1-204ENST00000561940 C8orf88P0DMB2 117 aa2.75□□□□□ -1.97
SMG1-204ENST00000561940 COX5BP10606 129 aa2.75□□□□□ -1.97
SMG1-204ENST00000561940 NQO1P15559 274 aaKnown RBP2.75□□□□□ -1.97
SMG1-204ENST00000561940 FUSP35637 526 aaKnown RBP eCLIP2.75□□□□□ -1.97
SMG1-204ENST00000561940 HERVK_113P63121 156 aa2.75□□□□□ -1.97
SMG1-204ENST00000561940 HPCAP84074 193 aa2.75□□□□□ -1.97
SMG1-204ENST00000561940 SPIN4Q56A73 249 aa2.75□□□□□ -1.97
SMG1-204ENST00000561940 GPR119Q8TDV5 335 aa2.75□□□□□ -1.97
SMG1-204ENST00000561940 XPNPEP1Q9NQW7 623 aa2.75□□□□□ -1.97
SMG1-204ENST00000561940 NBEAL2Q6ZNJ1 2754 aa2.75□□□□□ -1.97
SMG1-204ENST00000561940 DIDO1Q9BTC0 2240 aaKnown RBP2.74□□□□□ -1.97
SMG1-204ENST00000561940 PTPRJQ12913 1337 aa2.74□□□□□ -1.97
SMG1-204ENST00000561940 CEP192Q8TEP8 1941 aa2.74□□□□□ -1.97
SMG1-204ENST00000561940 CRTAPO75718 401 aaPredicted RBP2.74□□□□□ -1.97
SMG1-204ENST00000561940 LYPLA2O95372 231 aa2.74□□□□□ -1.97
SMG1-204ENST00000561940 IGLV3-27P01718 113 aa2.74□□□□□ -1.97
SMG1-204ENST00000561940 CD7P09564 240 aa2.74□□□□□ -1.97
SMG1-204ENST00000561940 ESDP10768 282 aa2.74□□□□□ -1.97
SMG1-204ENST00000561940 OPRM1P35372 400 aa2.74□□□□□ -1.97
SMG1-204ENST00000561940 BLVRAP53004 296 aa2.74□□□□□ -1.97
SMG1-204ENST00000561940 FGF12P61328 243 aa2.74□□□□□ -1.97
SMG1-204ENST00000561940 TCF24Q7RTU0 167 aa2.74□□□□□ -1.97
SMG1-204ENST00000561940 ZNF567Q8N184 647 aa2.74□□□□□ -1.97
SMG1-204ENST00000561940 TMEM156Q8N614 296 aa2.74□□□□□ -1.97
SMG1-204ENST00000561940 PIGXQ8TBF5 258 aa2.74□□□□□ -1.97
SMG1-204ENST00000561940 CAPZA3Q96KX2 299 aa2.74□□□□□ -1.97
SMG1-204ENST00000561940 SMR3AQ99954 134 aa2.74□□□□□ -1.97
SMG1-204ENST00000561940 LRRC19Q9H756 370 aa2.74□□□□□ -1.97
SMG1-204ENST00000561940 HDGFL3Q9Y3E1 203 aa2.74□□□□□ -1.97
SMG1-204ENST00000561940 POLR3HQ9Y535 204 aaPredicted RBP2.74□□□□□ -1.97
SMG1-204ENST00000561940 MINOS1-NBL1R4GNA1 71 aa2.74□□□□□ -1.97
SMG1-204ENST00000561940 NUP210Q8TEM1 1887 aaPredicted RBP2.73□□□□□ -1.97
SMG1-204ENST00000561940 NSD1Q96L73 2696 aaPredicted RBP2.73□□□□□ -1.97
SMG1-204ENST00000561940 C5orf49A4QMS7 147 aa2.73□□□□□ -1.97
SMG1-204ENST00000561940 CPMP14384 443 aa2.73□□□□□ -1.97
SMG1-204ENST00000561940 GZMHP20718 246 aa2.73□□□□□ -1.97
SMG1-204ENST00000561940 DDTP30046 118 aa2.73□□□□□ -1.97
SMG1-204ENST00000561940 TSPEAR-AS2P59090 65 aa2.73□□□□□ -1.97
SMG1-204ENST00000561940 UBE2IP63279 158 aaKnown RBP2.73□□□□□ -1.97
SMG1-204ENST00000561940 CCL7P80098 99 aa2.73□□□□□ -1.97
SMG1-204ENST00000561940 FABP5Q01469 135 aa2.73□□□□□ -1.97
SMG1-204ENST00000561940 ZNF181Q2M3W8 571 aa2.73□□□□□ -1.97
SMG1-204ENST00000561940 CDKL4Q5MAI5 379 aa2.73□□□□□ -1.97
SMG1-204ENST00000561940 CCDC121Q6ZUS5 278 aa2.73□□□□□ -1.97
SMG1-204ENST00000561940 OR11H1Q8NG94 326 aa2.73□□□□□ -1.97
SMG1-204ENST00000561940 Q8WTZ3 238 aa2.73□□□□□ -1.97
SMG1-204ENST00000561940 TBX5Q99593 518 aa2.73□□□□□ -1.97
SMG1-204ENST00000561940 MND1Q9BWT6 205 aa2.73□□□□□ -1.97
SMG1-204ENST00000561940 HES4Q9HCC6 221 aa2.73□□□□□ -1.97
SMG1-204ENST00000561940 DOCK5Q9H7D0 1870 aa2.73□□□□□ -1.97
SMG1-204ENST00000561940 BSNQ9UPA5 3926 aa2.73□□□□□ -1.97
SMG1-204ENST00000561940 TACC2O95359 2948 aa2.72□□□□□ -1.97
SMG1-204ENST00000561940 WNK1Q9H4A3 2382 aa2.72□□□□□ -1.97
SMG1-204ENST00000561940 SPTY2D1-AS1A0A0U1RR47 76 aa2.72□□□□□ -1.97
SMG1-204ENST00000561940 SMIM23A6NLE4 172 aa2.72□□□□□ -1.97
SMG1-204ENST00000561940 ZNF878C9JN71 531 aa2.72□□□□□ -1.97
SMG1-204ENST00000561940 H0Y980 276 aa2.72□□□□□ -1.97
SMG1-204ENST00000561940 PIRO00625 290 aa2.72□□□□□ -1.97
SMG1-204ENST00000561940 LY6HO94772 140 aa2.72□□□□□ -1.97
SMG1-204ENST00000561940 TYMSP04818 313 aa2.72□□□□□ -1.97
SMG1-204ENST00000561940 IL6P05231 212 aa2.72□□□□□ -1.97
SMG1-204ENST00000561940 CCL4P13236 92 aa2.72□□□□□ -1.97
SMG1-204ENST00000561940 ANP32AP39687 249 aaKnown RBP2.72□□□□□ -1.97
SMG1-204ENST00000561940 KRTAP12-3P60328 96 aa2.72□□□□□ -1.97
SMG1-204ENST00000561940 BTN3A2P78410 334 aa2.72□□□□□ -1.97
SMG1-204ENST00000561940 ZNF117Q03924 483 aa2.72□□□□□ -1.97
SMG1-204ENST00000561940 MLLT11Q13015 90 aaPredicted RBP2.72□□□□□ -1.97
SMG1-204ENST00000561940 DEFB133Q30KQ1 61 aa2.72□□□□□ -1.97
SMG1-204ENST00000561940 RASL11AQ6T310 242 aa2.72□□□□□ -1.97
SMG1-204ENST00000561940 ZNF322Q6U7Q0 402 aaPredicted RBP2.72□□□□□ -1.97
SMG1-204ENST00000561940 LRRN1Q6UXK5 716 aa2.72□□□□□ -1.97
SMG1-204ENST00000561940 SLC51BQ86UW2 128 aa2.72□□□□□ -1.97
SMG1-204ENST00000561940 OR10A6Q8NH74 314 aa2.72□□□□□ -1.97
SMG1-204ENST00000561940 MS4A6EQ96DS6 147 aa2.72□□□□□ -1.97
SMG1-204ENST00000561940 MGLLQ99685 303 aa2.72□□□□□ -1.97
SMG1-204ENST00000561940 CDCA4Q9BXL8 241 aa2.72□□□□□ -1.97
SMG1-204ENST00000561940 DERL2Q9GZP9 239 aa2.72□□□□□ -1.97
SMG1-204ENST00000561940 SMDT1Q9H4I9 107 aa2.72□□□□□ -1.97
SMG1-204ENST00000561940 C11orf1Q9H5F2 150 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms