RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 GEMIN7Q9H840 131 aaKnown RBP8.57□□□□□ -1.04
GTF3C1-202ENST00000561623 ZNF236Q9UL36 1845 aa8.57□□□□□ -1.04
GTF3C1-202ENST00000561623 SRD5A1P18405 259 aa8.57□□□□□ -1.04
GTF3C1-202ENST00000561623 TRBV24-1A0A075B6N3 115 aa8.57□□□□□ -1.04
GTF3C1-202ENST00000561623 RTN4RL2Q86UN3 420 aa8.57□□□□□ -1.04
GTF3C1-202ENST00000561623 ANAPC13Q9BS18 74 aa8.57□□□□□ -1.04
GTF3C1-202ENST00000561623 FOXA2Q9Y261 457 aaPredicted RBP8.57□□□□□ -1.04
GTF3C1-202ENST00000561623 MOB4Q9Y3A3 225 aa8.57□□□□□ -1.04
GTF3C1-202ENST00000561623 ABCA7Q8IZY2 2146 aa8.57□□□□□ -1.04
GTF3C1-202ENST00000561623 C9JCJ5 164 aa8.57□□□□□ -1.04
GTF3C1-202ENST00000561623 TMEM262E9PQX1 116 aa8.57□□□□□ -1.04
GTF3C1-202ENST00000561623 OR10J3Q5JRS4 329 aa8.57□□□□□ -1.04
GTF3C1-202ENST00000561623 TEX38Q6PEX7 206 aa8.57□□□□□ -1.04
GTF3C1-202ENST00000561623 ORMDL3Q8N138 153 aa8.57□□□□□ -1.04
GTF3C1-202ENST00000561623 OR4X2Q8NGF9 303 aa8.57□□□□□ -1.04
GTF3C1-202ENST00000561623 OR5A1Q8NGJ0 315 aa8.57□□□□□ -1.04
GTF3C1-202ENST00000561623 ORAOV1Q8WV07 137 aa8.57□□□□□ -1.04
GTF3C1-202ENST00000561623 ZNF319Q9P2F9 582 aa8.57□□□□□ -1.04
GTF3C1-202ENST00000561623 CACNA1IQ9P0X4 2223 aa8.57□□□□□ -1.04
GTF3C1-202ENST00000561623 EREGO14944 169 aa8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 PYYP10082 97 aa8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 SUPT4H1P63272 117 aaKnown RBP8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 HGFACQ04756 655 aa8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 ZNF664Q8N3J9 261 aa8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 OR9G1Q8NH87 305 aa8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 C8orf46Q8TAG6 207 aa8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 PSMB11A5LHX3 300 aa8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 DIDO1Q9BTC0 2240 aaKnown RBP8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 COL4A5P29400 1685 aa8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 ATP5LO75964 103 aa8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 IGHV4-39P01824 125 aa8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 LHFPL4Q7Z7J7 247 aa8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 TMEM186Q96B77 213 aa8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 GNB1LQ9BYB4 327 aa8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 PPIAL4CA0A0B4J2A2 164 aa8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 CELA3AP09093 270 aa8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 PPIAL4GP0DN37 164 aa8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 TSPOP30536 169 aa8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 SCARF2Q96GP6 870 aaPredicted RBP8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 TMEM8BA6NDV4 472 aa8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 MPZP25189 248 aa8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 DMRTC2Q8IXT2 367 aaPredicted RBP8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 AHCTF1Q8WYP5 2266 aa8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 TRBV6-7A0A0A0MS04 114 aa8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 A0A1W2PS18 150 aa8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 DNAL4O96015 105 aa8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 MAJINQ3KP22 176 aa8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 PNKDQ8N490 385 aa8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 DUX5Q96PT3 197 aa8.56□□□□□ -1.04
GTF3C1-202ENST00000561623 ALPK2Q86TB3 2170 aa8.55□□□□□ -1.04
GTF3C1-202ENST00000561623 C2orf88Q9BSF0 95 aa8.55□□□□□ -1.04
GTF3C1-202ENST00000561623 PILRBQ9UKJ0 227 aa8.55□□□□□ -1.04
GTF3C1-202ENST00000561623 NDUFS8O00217 210 aa8.55□□□□□ -1.04
GTF3C1-202ENST00000561623 ID3Q02535 119 aa8.55□□□□□ -1.04
GTF3C1-202ENST00000561623 BMPERQ8N8U9 685 aa8.55□□□□□ -1.04
GTF3C1-202ENST00000561623 BEND2Q8NDZ0 799 aa8.55□□□□□ -1.04
GTF3C1-202ENST00000561623 CHCHD2Q9Y6H1 151 aaPredicted RBP8.55□□□□□ -1.04
GTF3C1-202ENST00000561623 COL6A6A6NMZ7 2263 aa8.55□□□□□ -1.04
GTF3C1-202ENST00000561623 TIMP3P35625 211 aa8.55□□□□□ -1.04
GTF3C1-202ENST00000561623 SP5Q6BEB4 398 aaPredicted RBP8.55□□□□□ -1.04
GTF3C1-202ENST00000561623 FER1L6-AS1Q8NA97 138 aa8.55□□□□□ -1.04
GTF3C1-202ENST00000561623 OR2K2Q8NGT1 345 aa8.55□□□□□ -1.04
GTF3C1-202ENST00000561623 TMEM242Q9NWH2 141 aa8.55□□□□□ -1.04
GTF3C1-202ENST00000561623 SEC16AO15027 2179 aa8.55□□□□□ -1.04
GTF3C1-202ENST00000561623 NPIPB11E5RHQ5 1161 aa8.55□□□□□ -1.04
GTF3C1-202ENST00000561623 FBXL15Q9H469 300 aa8.55□□□□□ -1.04
GTF3C1-202ENST00000561623 C7orf69Q9H7B7 122 aa8.55□□□□□ -1.04
GTF3C1-202ENST00000561623 COL11A2P13942 1736 aaPredicted RBP8.55□□□□□ -1.04
GTF3C1-202ENST00000561623 GZMBP10144 247 aa8.55□□□□□ -1.04
GTF3C1-202ENST00000561623 CTSSP25774 331 aa8.55□□□□□ -1.04
GTF3C1-202ENST00000561623 LCN12Q6JVE5 192 aa8.55□□□□□ -1.04
GTF3C1-202ENST00000561623 MRAPQ8TCY5 172 aa8.55□□□□□ -1.04
GTF3C1-202ENST00000561623 SEMA5BQ9P283 1151 aa8.55□□□□□ -1.04
GTF3C1-202ENST00000561623 A0A0G2JMM0 328 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 A0A1W2PPB8 328 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 KIR3DP1A8MWS1 328 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 SUMO2P61956 95 aaKnown RBP8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 ACTL10Q5JWF8 245 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 TIMM23BQ5SRD1 257 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 TMEM101Q96IK0 257 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 MRPL20Q9BYC9 149 aaKnown RBP8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 PSCAO43653 123 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 NPPCP23582 126 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 TPTE2P1Q5T6R2 138 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 C1QTNF5Q9BXJ0 243 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 CFHR5Q9BXR6 569 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 OSTCQ9NRP0 149 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 A0A1W2PQM1 296 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 hDV102S1A0JD36 115 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 TSPAN7P41732 249 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 ATP5G2Q06055 141 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 SAMD5Q5TGI4 173 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 FAM216BQ8N7L0 139 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 OR5AN1Q8NGI8 311 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 FAM159AQ6UWV7 190 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 NPFFR1Q9GZQ6 430 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 EVI2AP22794 236 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 CKS1BP61024 79 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 ZNF585BQ52M93 769 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms