RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, human

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPB-208	ENST00000561271	C5orf66	Q9H5L9	145 aa		12.86	□□□□□ -0.35
CDC42BPB-208	ENST00000561271		A0A0B4J293	547 aa		12.85	□□□□□ -0.35
CDC42BPB-208	ENST00000561271		A0A0G2JRQ6	117 aa		12.85	□□□□□ -0.35
CDC42BPB-208	ENST00000561271	CTSD	P07339	412 aa	Predicted RBP	12.85	□□□□□ -0.35
CDC42BPB-208	ENST00000561271	CTSG	P08311	255 aa		12.85	□□□□□ -0.35
CDC42BPB-208	ENST00000561271	UCP1	P25874	307 aa		12.85	□□□□□ -0.35
CDC42BPB-208	ENST00000561271	TMBIM6	P55061	237 aa		12.85	□□□□□ -0.35
CDC42BPB-208	ENST00000561271	MEF2D	Q14814	521 aa		12.85	□□□□□ -0.35
CDC42BPB-208	ENST00000561271	ANKRD55	Q3KP44	614 aa		12.85	□□□□□ -0.35
CDC42BPB-208	ENST00000561271	OR4C16	Q8NGL9	310 aa		12.85	□□□□□ -0.35
CDC42BPB-208	ENST00000561271	RNASE11	Q8TAA1	199 aa	Known RBP	12.85	□□□□□ -0.35
CDC42BPB-208	ENST00000561271	C6orf62	Q9GZU0	229 aa	Predicted RBP	12.85	□□□□□ -0.35
CDC42BPB-208	ENST00000561271	AGRN	O00468	2067 aa		12.85	□□□□□ -0.35
CDC42BPB-208	ENST00000561271	NUPL2	O15504	423 aa	Known RBP	12.84	□□□□□ -0.35
CDC42BPB-208	ENST00000561271	IFNA17	P01571	189 aa		12.84	□□□□□ -0.35
CDC42BPB-208	ENST00000561271	OR5AC1	P0C628	307 aa		12.84	□□□□□ -0.35
CDC42BPB-208	ENST00000561271	MFAP4	P55083	255 aa		12.84	□□□□□ -0.35
CDC42BPB-208	ENST00000561271	ERH	P84090	104 aa	Known RBP	12.84	□□□□□ -0.35
CDC42BPB-208	ENST00000561271	SPAG8	Q99932	426 aa	Predicted RBP	12.84	□□□□□ -0.35
CDC42BPB-208	ENST00000561271	BCL7B	Q9BQE9	202 aa		12.84	□□□□□ -0.35
CDC42BPB-208	ENST00000561271	GAR1	Q9NY12	217 aa	Known RBP	12.84	□□□□□ -0.35
CDC42BPB-208	ENST00000561271	UBQLN2	Q9UHD9	624 aa		12.84	□□□□□ -0.35
CDC42BPB-208	ENST00000561271	C14orf166	Q9Y224	244 aa	Known RBP	12.84	□□□□□ -0.35
CDC42BPB-208	ENST00000561271	IGHV3-49	A0A0A0MS15	119 aa		12.83	□□□□□ -0.36
CDC42BPB-208	ENST00000561271		H3BMQ9	156 aa		12.83	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	NOL3	O60936	208 aa	Known RBP	12.83	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	ATG12	O94817	140 aa		12.83	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	AKAIN1	P0CW23	69 aa		12.83	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	FCGR2B	P31994	310 aa	Predicted RBP	12.83	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	HOXA1	P49639	335 aa	Predicted RBP	12.83	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	REL	Q04864	619 aa	Predicted RBP	12.83	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	LHFPL5	Q8TAF8	219 aa		12.83	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	PDCD10	Q9BUL8	212 aa		12.83	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	GGTLC1	Q9BX51	225 aa		12.83	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	NAA60	Q9H7X0	242 aa		12.83	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	RYR2	Q92736	4967 aa		12.83	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	SACS	Q9NZJ4	4579 aa		12.83	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	C15orf62	A8K5M9	175 aa		12.82	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	DISC1	C4P0D8	188 aa		12.82	□□□□□ -0.36
CDC42BPB-208	ENST00000561271		K7EMT4	169 aa		12.82	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	TSPAN4	O14817	238 aa		12.82	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	CTDSPL	O15194	276 aa		12.82	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	GNG7	O60262	68 aa		12.82	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	YIF1A	O95070	293 aa		12.82	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	SNCA	P37840	140 aa		12.82	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	ETV6	P41212	452 aa		12.82	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	RRNAD1	Q96FB5	475 aa	Known RBP	12.82	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	RTBDN	Q9BSG5	229 aa	Predicted RBP	12.82	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	SLIRP	Q9GZT3	109 aa	Known RBP	12.82	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	NXF2	Q9GZY0	626 aa	Known RBP	12.82	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	TMEM222	Q9H0R3	208 aa		12.82	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	LYST	Q99698	3801 aa		12.82	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	12.81	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	12.81	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	RNASE2	P10153	161 aa	Known RBP	12.81	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	RPL5	P46777	297 aa	Known RBP	12.81	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	ODF3L2	Q3SX64	289 aa		12.81	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	LAMTOR1	Q6IAA8	161 aa		12.81	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	OR51S1	Q8NGJ8	323 aa		12.81	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	TXN2	Q99757	166 aa		12.81	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	SMPX	Q9UHP9	88 aa		12.81	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	IGHV3OR16-13	A0A075B7E8	117 aa		12.8	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	IGHV3-74	A0A0B4J1X5	117 aa		12.8	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	IGHV7-4-1	A0A0J9YVY3	117 aa		12.8	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	INS-IGF2	F8WCM5	200 aa		12.8	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	B3GALNT1	O75752	331 aa		12.8	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	SURF2	Q15527	256 aa	Predicted RBP	12.8	□□□□□ -0.36
CDC42BPB-208	ENST00000561271		Q6ZRM9	215 aa		12.8	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	TMEM116	Q8NCL8	245 aa		12.8	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	GLYATL2	Q8WU03	294 aa		12.8	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	OR10C1	Q96KK4	312 aa		12.8	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	RNF2	Q99496	336 aa		12.8	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	PRRT1	Q99946	306 aa		12.8	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	RABL2A	Q9UBK7	228 aa	Predicted RBP	12.8	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	RABL2B	Q9UNT1	228 aa		12.8	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	ANKRD20A5P	A0PJZ0	165 aa		12.79	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	CRYM-AS1	A6NIL9	109 aa		12.79	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	CHEK1	O14757	476 aa		12.79	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	GSTZ1	O43708	216 aa	Predicted RBP	12.79	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	CDS2	O95674	445 aa		12.79	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	DUSP18	Q8NEJ0	188 aa		12.79	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	MCFD2	Q8NI22	146 aa		12.79	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	RBPMS	Q93062	196 aa	Known RBP	12.79	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	RHPN1-AS1	Q9BWJ2	59 aa		12.79	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	ENY2	Q9NPA8	101 aa		12.79	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	PRR13	Q9NZ81	148 aa		12.79	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	CACNG5	Q9UF02	275 aa		12.79	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	OR4C46	A6NHA9	309 aa		12.78	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	TNFSF8	P32971	234 aa		12.78	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	TMEM268	Q5VZI3	342 aa		12.78	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	PVRIG	Q6DKI7	326 aa		12.78	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	FAM219A	Q8IW50	185 aa		12.78	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	SELENOH	Q8IZQ5	122 aa	Known RBP	12.78	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	MRPL36	Q9P0J6	103 aa	Known RBP	12.78	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	RSL24D1	Q9UHA3	163 aa	Known RBP	12.78	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	GPR132	Q9UNW8	380 aa		12.78	□□□□□ -0.36
CDC42BPB-208	ENST00000561271	IGKV3-7	A0A075B6H7	116 aa		12.77	□□□□□ -0.37
CDC42BPB-208	ENST00000561271	CORT	O00230	105 aa		12.77	□□□□□ -0.37
CDC42BPB-208	ENST00000561271	NXPH3	O95157	252 aa		12.77	□□□□□ -0.37
CDC42BPB-208	ENST00000561271	OPRK1	P41145	380 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms