RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 DUX3Q96PT4 197 aa8.33□□□□□ -1.08
TPM1-229ENST00000561242 TXN2Q99757 166 aa8.33□□□□□ -1.08
TPM1-229ENST00000561242 RBKSQ9H477 322 aa8.33□□□□□ -1.08
TPM1-229ENST00000561242 ZC4H2Q9NQZ6 224 aa8.33□□□□□ -1.08
TPM1-229ENST00000561242 TBC1D24Q9ULP9 559 aa8.33□□□□□ -1.08
TPM1-229ENST00000561242 STRAPQ9Y3F4 350 aaKnown RBP8.33□□□□□ -1.08
TPM1-229ENST00000561242 SEC14L6B5MCN3 397 aa8.32□□□□□ -1.08
TPM1-229ENST00000561242 SYNGR2O43760 224 aa8.32□□□□□ -1.08
TPM1-229ENST00000561242 SOX15O60248 233 aa8.32□□□□□ -1.08
TPM1-229ENST00000561242 SAP30O75446 220 aa8.32□□□□□ -1.08
TPM1-229ENST00000561242 NDUFB8O95169 186 aa8.32□□□□□ -1.08
TPM1-229ENST00000561242 IGHV3-23P01764 117 aa8.32□□□□□ -1.08
TPM1-229ENST00000561242 PET100P0DJ07 73 aa8.32□□□□□ -1.08
TPM1-229ENST00000561242 S100A10P60903 97 aa8.32□□□□□ -1.08
TPM1-229ENST00000561242 WT1-ASQ06250 92 aa8.32□□□□□ -1.08
TPM1-229ENST00000561242 DEFB136Q30KP8 78 aa8.32□□□□□ -1.08
TPM1-229ENST00000561242 SPANXN5Q5MJ07 72 aa8.32□□□□□ -1.08
TPM1-229ENST00000561242 ASPHD1Q5U4P2 390 aa8.32□□□□□ -1.08
TPM1-229ENST00000561242 HIST2H2BDQ6DRA6 164 aa8.32□□□□□ -1.08
TPM1-229ENST00000561242 S100A7AQ86SG5 101 aa8.32□□□□□ -1.08
TPM1-229ENST00000561242 OR52B4Q8NGK2 314 aa8.32□□□□□ -1.08
TPM1-229ENST00000561242 LHFPL5Q8TAF8 219 aa8.32□□□□□ -1.08
TPM1-229ENST00000561242 WIPF2Q8TF74 440 aaPredicted RBP8.32□□□□□ -1.08
TPM1-229ENST00000561242 BSCL2Q96G97 398 aaPredicted RBP8.32□□□□□ -1.08
TPM1-229ENST00000561242 RAX2Q96IS3 184 aa8.32□□□□□ -1.08
TPM1-229ENST00000561242 RAB40CQ96S21 281 aa8.32□□□□□ -1.08
TPM1-229ENST00000561242 SEC22CQ9BRL7 303 aa8.32□□□□□ -1.08
TPM1-229ENST00000561242 PSENENQ9NZ42 101 aa8.32□□□□□ -1.08
TPM1-229ENST00000561242 UFC1Q9Y3C8 167 aa8.32□□□□□ -1.08
TPM1-229ENST00000561242 SETD2Q9BYW2 2564 aaPredicted RBP8.31□□□□□ -1.08
TPM1-229ENST00000561242 IGLV11-55A0A075B6I3 123 aa8.31□□□□□ -1.08
TPM1-229ENST00000561242 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.31□□□□□ -1.08
TPM1-229ENST00000561242 TRBV9A0A0B4J1U6 114 aa8.31□□□□□ -1.08
TPM1-229ENST00000561242 IGHV3-21A0A0B4J1V1 117 aa8.31□□□□□ -1.08
TPM1-229ENST00000561242 E7EUB6 86 aa8.31□□□□□ -1.08
TPM1-229ENST00000561242 GOSR2O14653 212 aa8.31□□□□□ -1.08
TPM1-229ENST00000561242 ADAP1O75689 374 aa8.31□□□□□ -1.08
TPM1-229ENST00000561242 MT-CO2P00403 227 aa8.31□□□□□ -1.08
TPM1-229ENST00000561242 IAPPP10997 89 aa8.31□□□□□ -1.08
TPM1-229ENST00000561242 HOXD3P31249 432 aaPredicted RBP8.31□□□□□ -1.08
TPM1-229ENST00000561242 GPR183P32249 361 aa8.31□□□□□ -1.08
TPM1-229ENST00000561242 BTCP35070 178 aa8.31□□□□□ -1.08
TPM1-229ENST00000561242 NUP62P37198 522 aaPredicted RBP8.31□□□□□ -1.08
TPM1-229ENST00000561242 C19orf54Q5BKX5 351 aa8.31□□□□□ -1.08
TPM1-229ENST00000561242 NMSQ5H8A3 153 aa8.31□□□□□ -1.08
TPM1-229ENST00000561242 C1QL4Q86Z23 238 aa8.31□□□□□ -1.08
TPM1-229ENST00000561242 C2orf50Q96LR7 162 aa8.31□□□□□ -1.08
TPM1-229ENST00000561242 ATP6V0BQ99437 205 aa8.31□□□□□ -1.08
TPM1-229ENST00000561242 GINS3Q9BRX5 216 aa8.31□□□□□ -1.08
TPM1-229ENST00000561242 MAGT1Q9H0U3 335 aa8.31□□□□□ -1.08
TPM1-229ENST00000561242 MED28Q9H204 178 aa8.31□□□□□ -1.08
TPM1-229ENST00000561242 MGAT4CQ9UBM8 478 aa8.31□□□□□ -1.08
TPM1-229ENST00000561242 HSPB7Q9UBY9 170 aa8.31□□□□□ -1.08
TPM1-229ENST00000561242 LSM5Q9Y4Y9 91 aaKnown RBP8.31□□□□□ -1.08
TPM1-229ENST00000561242 IGHV4OR15-8A0A075B7B6 117 aa8.3□□□□□ -1.08
TPM1-229ENST00000561242 A0A087WW49 117 aa8.3□□□□□ -1.08
TPM1-229ENST00000561242 A0A0G2JRQ6 117 aa8.3□□□□□ -1.08
TPM1-229ENST00000561242 SMCO3A2RU48 225 aa8.3□□□□□ -1.08
TPM1-229ENST00000561242 OR2T8A6NH00 312 aa8.3□□□□□ -1.08
TPM1-229ENST00000561242 INS-IGF2F8WCM5 200 aa8.3□□□□□ -1.08
TPM1-229ENST00000561242 I3L521 148 aa8.3□□□□□ -1.08
TPM1-229ENST00000561242 SSSCA1O60232 199 aa8.3□□□□□ -1.08
TPM1-229ENST00000561242 RAB31Q13636 194 aa8.3□□□□□ -1.08
TPM1-229ENST00000561242 MRGPRG-AS1Q2M3A8 158 aa8.3□□□□□ -1.08
TPM1-229ENST00000561242 C2orf83Q53S99 150 aa8.3□□□□□ -1.08
TPM1-229ENST00000561242 Q6ZRM9 215 aa8.3□□□□□ -1.08
TPM1-229ENST00000561242 ZNF114Q8NC26 417 aa8.3□□□□□ -1.08
TPM1-229ENST00000561242 OR10P1Q8NGE3 313 aa8.3□□□□□ -1.08
TPM1-229ENST00000561242 SCARB1Q8WTV0 552 aa8.3□□□□□ -1.08
TPM1-229ENST00000561242 Q8WTZ3 238 aa8.3□□□□□ -1.08
TPM1-229ENST00000561242 MARVELD1Q9BSK0 173 aa8.3□□□□□ -1.08
TPM1-229ENST00000561242 C20orf24Q9BUV8 137 aa8.3□□□□□ -1.08
TPM1-229ENST00000561242 S4R3C0 116 aa8.3□□□□□ -1.08
TPM1-229ENST00000561242 NIPBLQ6KC79 2804 aaeCLIP8.3□□□□□ -1.08
TPM1-229ENST00000561242 ZFP92A6NM28 416 aa8.29□□□□□ -1.08
TPM1-229ENST00000561242 DBX1A6NMT0 343 aa8.29□□□□□ -1.08
TPM1-229ENST00000561242 OR2C1O95371 312 aa8.29□□□□□ -1.08
TPM1-229ENST00000561242 P0C879 139 aa8.29□□□□□ -1.08
TPM1-229ENST00000561242 EIF2B2P49770 351 aaKnown RBP8.29□□□□□ -1.08
TPM1-229ENST00000561242 CAV2P51636 162 aa8.29□□□□□ -1.08
TPM1-229ENST00000561242 SLURP1P55000 103 aa8.29□□□□□ -1.08
TPM1-229ENST00000561242 SYNJ2BPP57105 145 aa8.29□□□□□ -1.08
TPM1-229ENST00000561242 SSBP2P81877 361 aaPredicted RBP8.29□□□□□ -1.08
TPM1-229ENST00000561242 DEFA5Q01523 94 aa8.29□□□□□ -1.08
TPM1-229ENST00000561242 LAMTOR1Q6IAA8 161 aa8.29□□□□□ -1.08
TPM1-229ENST00000561242 C18orf65Q6ZTR6 163 aa8.29□□□□□ -1.08
TPM1-229ENST00000561242 STX12Q86Y82 276 aa8.29□□□□□ -1.08
TPM1-229ENST00000561242 ZBTB8BQ8NAP8 495 aaPredicted RBP8.29□□□□□ -1.08
TPM1-229ENST00000561242 MYOZ3Q8TDC0 251 aa8.29□□□□□ -1.08
TPM1-229ENST00000561242 ACY3Q96HD9 319 aa8.29□□□□□ -1.08
TPM1-229ENST00000561242 FANCD2OSQ96PS1 177 aa8.29□□□□□ -1.08
TPM1-229ENST00000561242 SLC25A31Q9H0C2 315 aa8.29□□□□□ -1.08
TPM1-229ENST00000561242 TMEM231Q9H6L2 316 aa8.29□□□□□ -1.08
TPM1-229ENST00000561242 CCSO14618 274 aa8.28□□□□□ -1.08
TPM1-229ENST00000561242 TGOLN2O43493 480 aa8.28□□□□□ -1.08
TPM1-229ENST00000561242 RNASE2P10153 161 aaKnown RBP8.28□□□□□ -1.08
TPM1-229ENST00000561242 IGLL1P15814 213 aa8.28□□□□□ -1.08
TPM1-229ENST00000561242 GPX4P36969 197 aaPredicted RBP8.28□□□□□ -1.08
TPM1-229ENST00000561242 POLR2GP62487 172 aaKnown RBP eCLIP8.28□□□□□ -1.08
TPM1-229ENST00000561242 HBG1P69891 147 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms