RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 RBMY1DP0C7P1 496 aaKnown RBP10.55□□□□□ -0.72
TPM1-223ENST00000560445 SURF2Q15527 256 aaPredicted RBP10.55□□□□□ -0.72
TPM1-223ENST00000560445 LHFPL1Q86WI0 220 aa10.55□□□□□ -0.72
TPM1-223ENST00000560445 FAM219AQ8IW50 185 aa10.55□□□□□ -0.72
TPM1-223ENST00000560445 DUSP18Q8NEJ0 188 aa10.55□□□□□ -0.72
TPM1-223ENST00000560445 ABHD1Q96SE0 405 aa10.55□□□□□ -0.72
TPM1-223ENST00000560445 TMEM231Q9H6L2 316 aa10.55□□□□□ -0.72
TPM1-223ENST00000560445 C14orf166Q9Y224 244 aaKnown RBP10.55□□□□□ -0.72
TPM1-223ENST00000560445 TP53TG1Q9Y2A0 90 aa10.55□□□□□ -0.72
TPM1-223ENST00000560445 KIR2DL5BA0A0G2JN68 375 aa10.54□□□□□ -0.72
TPM1-223ENST00000560445 KIR2DL5BA0A0G2JPC4 375 aa10.54□□□□□ -0.72
TPM1-223ENST00000560445 DISC1C4P0D8 188 aa10.54□□□□□ -0.72
TPM1-223ENST00000560445 RPL5P46777 297 aaKnown RBP10.54□□□□□ -0.72
TPM1-223ENST00000560445 HOXA1P49639 335 aaPredicted RBP10.54□□□□□ -0.72
TPM1-223ENST00000560445 MFAP2P55001 183 aa10.54□□□□□ -0.72
TPM1-223ENST00000560445 PAFAH1B2P68402 229 aa10.54□□□□□ -0.72
TPM1-223ENST00000560445 SPCS2Q15005 226 aa10.54□□□□□ -0.72
TPM1-223ENST00000560445 SCGB2B2Q4G0G5 96 aa10.54□□□□□ -0.72
TPM1-223ENST00000560445 STEAP1BQ6NZ63 245 aa10.54□□□□□ -0.72
TPM1-223ENST00000560445 KIR2DL5AQ8N109 375 aa10.54□□□□□ -0.72
TPM1-223ENST00000560445 TMEM217Q8N7C4 229 aa10.54□□□□□ -0.72
TPM1-223ENST00000560445 KIR2DL5BQ8NHK3 375 aa10.54□□□□□ -0.72
TPM1-223ENST00000560445 HUWE1Q7Z6Z7 4374 aaKnown RBP10.54□□□□□ -0.72
TPM1-223ENST00000560445 CTDSP2O14595 271 aa10.53□□□□□ -0.72
TPM1-223ENST00000560445 MT-CO2P00403 227 aa10.53□□□□□ -0.72
TPM1-223ENST00000560445 CD74P04233 296 aa10.53□□□□□ -0.72
TPM1-223ENST00000560445 CTSDP07339 412 aaPredicted RBP10.53□□□□□ -0.72
TPM1-223ENST00000560445 CTSGP08311 255 aa10.53□□□□□ -0.72
TPM1-223ENST00000560445 EDN2P20800 178 aa10.53□□□□□ -0.72
TPM1-223ENST00000560445 PPP5CP53041 499 aa10.53□□□□□ -0.72
TPM1-223ENST00000560445 IL18Q14116 193 aa10.53□□□□□ -0.72
TPM1-223ENST00000560445 Q6ZWC4 215 aa10.53□□□□□ -0.72
TPM1-223ENST00000560445 STPG3Q8N7X2 389 aa10.53□□□□□ -0.72
TPM1-223ENST00000560445 TMEM116Q8NCL8 245 aa10.53□□□□□ -0.72
TPM1-223ENST00000560445 PINX1Q96BK5 328 aaKnown RBP10.53□□□□□ -0.72
TPM1-223ENST00000560445 DIRAS2Q96HU8 199 aa10.53□□□□□ -0.72
TPM1-223ENST00000560445 NARS2Q96I59 477 aaKnown RBP10.53□□□□□ -0.72
TPM1-223ENST00000560445 SCGB3A2Q96PL1 93 aa10.53□□□□□ -0.72
TPM1-223ENST00000560445 CHRDL1Q9BU40 450 aa10.53□□□□□ -0.72
TPM1-223ENST00000560445 NXF2Q9GZY0 626 aaKnown RBP10.53□□□□□ -0.72
TPM1-223ENST00000560445 WFDC10AQ9H1F0 79 aa10.53□□□□□ -0.72
TPM1-223ENST00000560445 CCDC59Q9P031 241 aaKnown RBP10.53□□□□□ -0.72
TPM1-223ENST00000560445 TRAV14DV4A0A0A6YYC5 116 aa10.52□□□□□ -0.73
TPM1-223ENST00000560445 IGHV3-21A0A0B4J1V1 117 aa10.52□□□□□ -0.73
TPM1-223ENST00000560445 IGHV7-4-1A0A0J9YVY3 117 aa10.52□□□□□ -0.73
TPM1-223ENST00000560445 RPS10-NUDT3A0A1W2PQS6 291 aa10.52□□□□□ -0.73
TPM1-223ENST00000560445 I3L2K1 104 aa10.52□□□□□ -0.73
TPM1-223ENST00000560445 UCP1P25874 307 aa10.52□□□□□ -0.73
TPM1-223ENST00000560445 ADMP35318 185 aa10.52□□□□□ -0.73
TPM1-223ENST00000560445 DHODHQ02127 395 aa10.52□□□□□ -0.73
TPM1-223ENST00000560445 GALNT14Q96FL9 552 aa10.52□□□□□ -0.73
TPM1-223ENST00000560445 OR10C1Q96KK4 312 aa10.52□□□□□ -0.73
TPM1-223ENST00000560445 PRRT1Q99946 306 aa10.52□□□□□ -0.73
TPM1-223ENST00000560445 MIXL1Q9H2W2 232 aa10.52□□□□□ -0.73
TPM1-223ENST00000560445 RETNQ9HD89 108 aa10.52□□□□□ -0.73
TPM1-223ENST00000560445 SMPXQ9UHP9 88 aa10.52□□□□□ -0.73
TPM1-223ENST00000560445 TEX13DA0A0J9YY54 714 aaPredicted RBP10.51□□□□□ -0.73
TPM1-223ENST00000560445 A0A1W2PS18 150 aa10.51□□□□□ -0.73
TPM1-223ENST00000560445 DBX1A6NMT0 343 aa10.51□□□□□ -0.73
TPM1-223ENST00000560445 CTDSPLO15194 276 aa10.51□□□□□ -0.73
TPM1-223ENST00000560445 IGKV1-39P01597 117 aa10.51□□□□□ -0.73
TPM1-223ENST00000560445 IGKV1D-39P04432 117 aa10.51□□□□□ -0.73
TPM1-223ENST00000560445 PI3P19957 117 aa10.51□□□□□ -0.73
TPM1-223ENST00000560445 ZNF600Q6ZNG1 722 aa10.51□□□□□ -0.73
TPM1-223ENST00000560445 NOXA1Q86UR1 476 aa10.51□□□□□ -0.73
TPM1-223ENST00000560445 OR13C8Q8NGS7 320 aa10.51□□□□□ -0.73
TPM1-223ENST00000560445 SMIM4Q8WVI0 70 aa10.51□□□□□ -0.73
TPM1-223ENST00000560445 TP53RKQ96S44 253 aa10.51□□□□□ -0.73
TPM1-223ENST00000560445 RHPN1-AS1Q9BWJ2 59 aa10.51□□□□□ -0.73
TPM1-223ENST00000560445 RSL24D1Q9UHA3 163 aaKnown RBP10.51□□□□□ -0.73
TPM1-223ENST00000560445 F8W735 103 aaPredicted RBP10.5□□□□□ -0.73
TPM1-223ENST00000560445 AKAIN1P0CW23 69 aa10.5□□□□□ -0.73
TPM1-223ENST00000560445 ATF4P18848 351 aaPredicted RBP10.5□□□□□ -0.73
TPM1-223ENST00000560445 HTR2BP41595 481 aa10.5□□□□□ -0.73
TPM1-223ENST00000560445 EIF2B2P49770 351 aaKnown RBP10.5□□□□□ -0.73
TPM1-223ENST00000560445 SPCS3P61009 180 aa10.5□□□□□ -0.73
TPM1-223ENST00000560445 WFDC3Q8IUB2 231 aa10.5□□□□□ -0.73
TPM1-223ENST00000560445 OR52E5Q8NH55 327 aa10.5□□□□□ -0.73
TPM1-223ENST00000560445 DYNC2LI1Q8TCX1 351 aa10.5□□□□□ -0.73
TPM1-223ENST00000560445 TMEM222Q9H0R3 208 aa10.5□□□□□ -0.73
TPM1-223ENST00000560445 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.5□□□□□ -0.73
TPM1-223ENST00000560445 SCP2D1Q9UJQ7 156 aa10.5□□□□□ -0.73
TPM1-223ENST00000560445 KCNIP3Q9Y2W7 256 aa10.5□□□□□ -0.73
TPM1-223ENST00000560445 TRAV30A0A087WSZ9 112 aa10.49□□□□□ -0.73
TPM1-223ENST00000560445 TRAV2A0A0B4J234 112 aa10.49□□□□□ -0.73
TPM1-223ENST00000560445 CHEK1O14757 476 aa10.49□□□□□ -0.73
TPM1-223ENST00000560445 ST8SIA3O43173 380 aa10.49□□□□□ -0.73
TPM1-223ENST00000560445 IGKV1-5P01602 117 aa10.49□□□□□ -0.73
TPM1-223ENST00000560445 P0C879 139 aa10.49□□□□□ -0.73
TPM1-223ENST00000560445 OPRK1P41145 380 aa10.49□□□□□ -0.73
TPM1-223ENST00000560445 OR4D10Q8NGI6 311 aa10.49□□□□□ -0.73
TPM1-223ENST00000560445 MARCH1Q8TCQ1 289 aa10.49□□□□□ -0.73
TPM1-223ENST00000560445 RBPMSQ93062 196 aaKnown RBP10.49□□□□□ -0.73
TPM1-223ENST00000560445 OVOL2Q9BRP0 275 aa10.49□□□□□ -0.73
TPM1-223ENST00000560445 DNAH7Q8WXX0 4024 aa10.49□□□□□ -0.73
TPM1-223ENST00000560445 A0A0B4J293 547 aa10.48□□□□□ -0.73
TPM1-223ENST00000560445 FABP12A6NFH5 140 aa10.48□□□□□ -0.73
TPM1-223ENST00000560445 SPRY2O43597 315 aa10.48□□□□□ -0.73
TPM1-223ENST00000560445 ZNF207O43670 478 aaKnown RBP10.48□□□□□ -0.73
TPM1-223ENST00000560445 DFFBO76075 338 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms