RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, human

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEO1-208	ENST00000560328	TSPO	P30536	169 aa		7.73	□□□□□ -1.17
NEO1-208	ENST00000560328	ST6GALNAC3	Q8NDV1	305 aa		7.73	□□□□□ -1.17
NEO1-208	ENST00000560328	FAM90A9P	A6NNJ1	464 aa		7.73	□□□□□ -1.17
NEO1-208	ENST00000560328	IGHV3-11	P01762	117 aa		7.73	□□□□□ -1.17
NEO1-208	ENST00000560328	GLRX5	Q86SX6	157 aa		7.73	□□□□□ -1.17
NEO1-208	ENST00000560328	OR4C5	Q8NGB2	326 aa		7.73	□□□□□ -1.17
NEO1-208	ENST00000560328	IGHV2-26	A0A0B4J1V2	119 aa		7.73	□□□□□ -1.17
NEO1-208	ENST00000560328	IFITM10	A6NMD0	228 aa		7.73	□□□□□ -1.17
NEO1-208	ENST00000560328	HLA-DRB1	P01911	266 aa		7.73	□□□□□ -1.17
NEO1-208	ENST00000560328		J3QR89	54 aa		7.73	□□□□□ -1.17
NEO1-208	ENST00000560328	TRGC1	P0CF51	173 aa		7.73	□□□□□ -1.17
NEO1-208	ENST00000560328	IGHV1-8	P0DP01	117 aa		7.73	□□□□□ -1.17
NEO1-208	ENST00000560328	EFNA4	P52798	201 aa		7.73	□□□□□ -1.17
NEO1-208	ENST00000560328	C2orf83	Q53S99	150 aa		7.73	□□□□□ -1.17
NEO1-208	ENST00000560328	AP5S1	Q9NUS5	200 aa		7.73	□□□□□ -1.17
NEO1-208	ENST00000560328	TCTA	P57738	103 aa		7.73	□□□□□ -1.17
NEO1-208	ENST00000560328	FAM53A	Q6NSI3	398 aa	Predicted RBP	7.73	□□□□□ -1.17
NEO1-208	ENST00000560328	ZFP30	Q9Y2G7	519 aa		7.73	□□□□□ -1.17
NEO1-208	ENST00000560328	DPRX	A6NFQ7	191 aa		7.72	□□□□□ -1.17
NEO1-208	ENST00000560328		K7ENP7	123 aa		7.72	□□□□□ -1.17
NEO1-208	ENST00000560328	SLC17A3	O00476	420 aa		7.72	□□□□□ -1.17
NEO1-208	ENST00000560328	PKIA	P61925	76 aa		7.72	□□□□□ -1.17
NEO1-208	ENST00000560328	OR10W1	Q8NGF6	305 aa		7.72	□□□□□ -1.17
NEO1-208	ENST00000560328	FANCM	Q8IYD8	2048 aa		7.72	□□□□□ -1.17
NEO1-208	ENST00000560328	ZNF98	A6NK75	572 aa		7.72	□□□□□ -1.17
NEO1-208	ENST00000560328	MAP1LC3A	Q9H492	121 aa		7.72	□□□□□ -1.17
NEO1-208	ENST00000560328	IGKV1D-17	A0A075B6S4	117 aa		7.72	□□□□□ -1.17
NEO1-208	ENST00000560328	GRIFIN	A4D1Z8	144 aa		7.72	□□□□□ -1.17
NEO1-208	ENST00000560328	CD69	Q07108	199 aa		7.72	□□□□□ -1.17
NEO1-208	ENST00000560328	FAM169B	Q8N8A8	192 aa		7.72	□□□□□ -1.17
NEO1-208	ENST00000560328	TRBV6-6	A0A0A6YYG2	114 aa		7.72	□□□□□ -1.17
NEO1-208	ENST00000560328	TRBV9	A0A0B4J1U6	114 aa		7.72	□□□□□ -1.17
NEO1-208	ENST00000560328	CBLN1	P23435	193 aa		7.72	□□□□□ -1.17
NEO1-208	ENST00000560328	ADIPOQ	Q15848	244 aa		7.72	□□□□□ -1.17
NEO1-208	ENST00000560328	PRR30	Q53SZ7	412 aa	Predicted RBP	7.72	□□□□□ -1.17
NEO1-208	ENST00000560328	FAM159A	Q6UWV7	190 aa		7.72	□□□□□ -1.17
NEO1-208	ENST00000560328	GAFA1	Q96PS6	74 aa		7.72	□□□□□ -1.17
NEO1-208	ENST00000560328	PHF3	Q92576	2039 aa	Known RBP	7.72	□□□□□ -1.17
NEO1-208	ENST00000560328	CBY3	A6NI87	242 aa		7.72	□□□□□ -1.17
NEO1-208	ENST00000560328	LEPROTL1	O95214	131 aa		7.72	□□□□□ -1.17
NEO1-208	ENST00000560328	SRSF9	Q13242	221 aa	Known RBP eCLIP	7.72	□□□□□ -1.17
NEO1-208	ENST00000560328	COQ2	Q96H96	371 aa		7.72	□□□□□ -1.17
NEO1-208	ENST00000560328		Q9H3A6	140 aa		7.72	□□□□□ -1.17
NEO1-208	ENST00000560328	INTS1	Q8N201	2190 aa	Known RBP	7.71	□□□□□ -1.17
NEO1-208	ENST00000560328	COL6A6	A6NMZ7	2263 aa		7.71	□□□□□ -1.17
NEO1-208	ENST00000560328	PF4	P02776	101 aa		7.71	□□□□□ -1.17
NEO1-208	ENST00000560328	RPL13A	P40429	203 aa	Known RBP	7.71	□□□□□ -1.17
NEO1-208	ENST00000560328	SRSF3	P84103	164 aa	Known RBP	7.71	□□□□□ -1.17
NEO1-208	ENST00000560328	ASCL4	Q6XD76	172 aa		7.71	□□□□□ -1.17
NEO1-208	ENST00000560328	VPS25	Q9BRG1	176 aa		7.71	□□□□□ -1.17
NEO1-208	ENST00000560328	GPR61	Q9BZJ8	451 aa		7.71	□□□□□ -1.17
NEO1-208	ENST00000560328	YAE1D1	Q9NRH1	226 aa		7.71	□□□□□ -1.17
NEO1-208	ENST00000560328	TP53BP1	Q12888	1972 aa	Predicted RBP	7.71	□□□□□ -1.17
NEO1-208	ENST00000560328	DLX1	P56177	255 aa		7.71	□□□□□ -1.18
NEO1-208	ENST00000560328	HBB	P68871	147 aa		7.71	□□□□□ -1.18
NEO1-208	ENST00000560328	LEMD1	Q68G75	181 aa		7.71	□□□□□ -1.18
NEO1-208	ENST00000560328	RPRML	Q8N4K4	120 aa		7.71	□□□□□ -1.18
NEO1-208	ENST00000560328	POLE	Q07864	2286 aa		7.71	□□□□□ -1.18
NEO1-208	ENST00000560328	TRAV40	A0A0B4J280	105 aa		7.71	□□□□□ -1.18
NEO1-208	ENST00000560328	TCRBV4S1A1T	A0A5B7	111 aa		7.71	□□□□□ -1.18
NEO1-208	ENST00000560328	OR4C46	A6NHA9	309 aa		7.71	□□□□□ -1.18
NEO1-208	ENST00000560328	NMU	P48645	174 aa		7.71	□□□□□ -1.18
NEO1-208	ENST00000560328	TCF24	Q7RTU0	167 aa		7.71	□□□□□ -1.18
NEO1-208	ENST00000560328	DTX1	Q86Y01	620 aa		7.71	□□□□□ -1.18
NEO1-208	ENST00000560328	NEUROG1	Q92886	237 aa		7.71	□□□□□ -1.18
NEO1-208	ENST00000560328	GPR82	Q96P67	336 aa		7.71	□□□□□ -1.18
NEO1-208	ENST00000560328	SDF2L1	Q9HCN8	221 aa		7.71	□□□□□ -1.18
NEO1-208	ENST00000560328	ROS1	P08922	2347 aa		7.71	□□□□□ -1.18
NEO1-208	ENST00000560328	NUDT3	O95989	172 aa		7.71	□□□□□ -1.18
NEO1-208	ENST00000560328	IGKV1-5	P01602	117 aa		7.71	□□□□□ -1.18
NEO1-208	ENST00000560328	FMC1	Q96HJ9	113 aa		7.71	□□□□□ -1.18
NEO1-208	ENST00000560328	IL36B	Q9NZH7	164 aa		7.71	□□□□□ -1.18
NEO1-208	ENST00000560328		M0QZK8	103 aa		7.7	□□□□□ -1.18
NEO1-208	ENST00000560328	C10orf55	Q5SWW7	151 aa		7.7	□□□□□ -1.18
NEO1-208	ENST00000560328	FAM74A4	Q5TZK3	123 aa		7.7	□□□□□ -1.18
NEO1-208	ENST00000560328	VMO1	Q7Z5L0	202 aa		7.7	□□□□□ -1.18
NEO1-208	ENST00000560328	WDR83OS	Q9Y284	106 aa		7.7	□□□□□ -1.18
NEO1-208	ENST00000560328	MYO7B	Q6PIF6	2116 aa		7.7	□□□□□ -1.18
NEO1-208	ENST00000560328	CACNA1G	O43497	2377 aa		7.7	□□□□□ -1.18
NEO1-208	ENST00000560328	CACNA1H	O95180	2353 aa		7.7	□□□□□ -1.18
NEO1-208	ENST00000560328	RHOG	P84095	191 aa		7.7	□□□□□ -1.18
NEO1-208	ENST00000560328	NMS	Q5H8A3	153 aa		7.7	□□□□□ -1.18
NEO1-208	ENST00000560328	GCSAML	Q5JQS6	135 aa		7.7	□□□□□ -1.18
NEO1-208	ENST00000560328	IGFL3	Q6UXB1	125 aa		7.7	□□□□□ -1.18
NEO1-208	ENST00000560328	C20orf204	Q6ZNR8	217 aa		7.7	□□□□□ -1.18
NEO1-208	ENST00000560328	OR4X2	Q8NGF9	303 aa		7.7	□□□□□ -1.18
NEO1-208	ENST00000560328	HS3ST6	Q96QI5	342 aa		7.7	□□□□□ -1.18
NEO1-208	ENST00000560328	HELZ	P42694	1942 aa	Known RBP	7.7	□□□□□ -1.18
NEO1-208	ENST00000560328	FGF16	O43320	207 aa		7.7	□□□□□ -1.18
NEO1-208	ENST00000560328	KLRD1	Q13241	179 aa		7.7	□□□□□ -1.18
NEO1-208	ENST00000560328	RNF125	Q96EQ8	232 aa		7.7	□□□□□ -1.18
NEO1-208	ENST00000560328	NPIPB6	E9PJ23	425 aa		7.7	□□□□□ -1.18
NEO1-208	ENST00000560328	PVRIG	Q6DKI7	326 aa		7.7	□□□□□ -1.18
NEO1-208	ENST00000560328	ATRAID	Q6UW56	229 aa		7.7	□□□□□ -1.18
NEO1-208	ENST00000560328	ZNF502	Q8TBZ5	544 aa		7.7	□□□□□ -1.18
NEO1-208	ENST00000560328	NPFFR1	Q9GZQ6	430 aa		7.7	□□□□□ -1.18
NEO1-208	ENST00000560328	VSIR	Q9H7M9	311 aa		7.7	□□□□□ -1.18
NEO1-208	ENST00000560328	KIAA1671	Q9BY89	1806 aa		7.7	□□□□□ -1.18
NEO1-208	ENST00000560328	IGHV1-3	A0A0C4DH29	117 aa		7.7	□□□□□ -1.18
NEO1-208	ENST00000560328		E9PQ18	207 aa		7.7	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms